RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 SMARCA1P28370 1054 aa14.29□□□□□ -0.12
SPIDR-209ENST00000519141 MYSM1Q5VVJ2 828 aa14.29□□□□□ -0.12
SPIDR-209ENST00000519141 APOBEC3FQ8IUX4 373 aaKnown RBP14.29□□□□□ -0.12
SPIDR-209ENST00000519141 DIS3L2Q8IYB7 885 aaKnown RBP14.29□□□□□ -0.12
SPIDR-209ENST00000519141 TRPM4Q8TD43 1214 aa14.29□□□□□ -0.12
SPIDR-209ENST00000519141 MKL1Q969V6 931 aa14.29□□□□□ -0.12
SPIDR-209ENST00000519141 FRMPD2Q68DX3 1309 aaPredicted RBP14.28□□□□□ -0.12
SPIDR-209ENST00000519141 U2AF2P26368 475 aaKnown RBP eCLIP14.28□□□□□ -0.12
SPIDR-209ENST00000519141 LMOD1P29536 600 aaPredicted RBP14.28□□□□□ -0.12
SPIDR-209ENST00000519141 APLP1P51693 650 aa14.28□□□□□ -0.12
SPIDR-209ENST00000519141 UBE2HP62256 183 aa14.28□□□□□ -0.12
SPIDR-209ENST00000519141 ZNF543Q08ER8 600 aa14.28□□□□□ -0.12
SPIDR-209ENST00000519141 RRP1BQ14684 758 aaKnown RBP14.28□□□□□ -0.12
SPIDR-209ENST00000519141 CCDC96Q2M329 555 aa14.28□□□□□ -0.12
SPIDR-209ENST00000519141 MIGA2Q7L4E1 593 aa14.28□□□□□ -0.12
SPIDR-209ENST00000519141 GPT2Q8TD30 523 aa14.28□□□□□ -0.12
SPIDR-209ENST00000519141 LEO1Q8WVC0 666 aaPredicted RBP14.28□□□□□ -0.12
SPIDR-209ENST00000519141 TEPSINQ96N21 525 aa14.28□□□□□ -0.12
SPIDR-209ENST00000519141 FOXP1Q9H334 677 aaPredicted RBP14.28□□□□□ -0.12
SPIDR-209ENST00000519141 BRMS1Q9HCU9 246 aa14.28□□□□□ -0.12
SPIDR-209ENST00000519141 ZBTB21Q9ULJ3 1066 aa14.28□□□□□ -0.12
SPIDR-209ENST00000519141 SCN4AP35499 1836 aa14.27□□□□□ -0.12
SPIDR-209ENST00000519141 CYTH3O43739 400 aa14.27□□□□□ -0.12
SPIDR-209ENST00000519141 GADD45BO75293 160 aaPredicted RBP14.27□□□□□ -0.12
SPIDR-209ENST00000519141 EPS15P42566 896 aa14.27□□□□□ -0.12
SPIDR-209ENST00000519141 JAG1P78504 1218 aa14.27□□□□□ -0.12
SPIDR-209ENST00000519141 MAP3K10Q02779 954 aa14.27□□□□□ -0.12
SPIDR-209ENST00000519141 SLC35G1Q2M3R5 365 aa14.27□□□□□ -0.12
SPIDR-209ENST00000519141 GPATCH4Q5T3I0 446 aaKnown RBP14.27□□□□□ -0.12
SPIDR-209ENST00000519141 ANGEL2Q5VTE6 544 aaKnown RBP14.27□□□□□ -0.12
SPIDR-209ENST00000519141 NOSTRINQ8IVI9 506 aa14.27□□□□□ -0.12
SPIDR-209ENST00000519141 DCAF4Q8WV16 495 aa14.27□□□□□ -0.12
SPIDR-209ENST00000519141 RRP36Q96EU6 259 aaKnown RBP14.27□□□□□ -0.12
SPIDR-209ENST00000519141 USP28Q96RU2 1077 aa14.27□□□□□ -0.12
SPIDR-209ENST00000519141 PHF20Q9BVI0 1012 aa14.27□□□□□ -0.12
SPIDR-209ENST00000519141 DEFB129Q9H1M3 183 aa14.27□□□□□ -0.12
SPIDR-209ENST00000519141 SYNPO2Q9UMS6 1093 aa14.27□□□□□ -0.12
SPIDR-209ENST00000519141 SCAF8Q9UPN6 1271 aaKnown RBP14.27□□□□□ -0.12
SPIDR-209ENST00000519141 IQCA1LA6NCM1 817 aa14.26□□□□□ -0.13
SPIDR-209ENST00000519141 POTEIP0CG38 1075 aa14.26□□□□□ -0.13
SPIDR-209ENST00000519141 POTEJP0CG39 1038 aa14.26□□□□□ -0.13
SPIDR-209ENST00000519141 KRT2P35908 639 aa14.26□□□□□ -0.13
SPIDR-209ENST00000519141 CEBPZQ03701 1054 aaKnown RBP14.26□□□□□ -0.13
SPIDR-209ENST00000519141 TAF1DQ9H5J8 278 aaPredicted RBP14.26□□□□□ -0.13
SPIDR-209ENST00000519141 ARHGEF10LQ9HCE6 1279 aa14.26□□□□□ -0.13
SPIDR-209ENST00000519141 GPCPD1Q9NPB8 672 aa14.26□□□□□ -0.13
SPIDR-209ENST00000519141 SH3GLB2Q9NR46 395 aa14.26□□□□□ -0.13
SPIDR-209ENST00000519141 GGA3Q9NZ52 723 aa14.26□□□□□ -0.13
SPIDR-209ENST00000519141 SEC63Q9UGP8 760 aaKnown RBP14.26□□□□□ -0.13
SPIDR-209ENST00000519141 ISY1Q9ULR0 285 aaKnown RBP14.26□□□□□ -0.13
SPIDR-209ENST00000519141 BTBD18B2RXH4 712 aa14.26□□□□□ -0.13
SPIDR-209ENST00000519141 RAD21O60216 631 aa14.26□□□□□ -0.13
SPIDR-209ENST00000519141 CAP2P40123 477 aa14.26□□□□□ -0.13
SPIDR-209ENST00000519141 NLRP5P59047 1200 aa14.26□□□□□ -0.13
SPIDR-209ENST00000519141 SLFN13Q68D06 897 aa14.26□□□□□ -0.13
SPIDR-209ENST00000519141 SIAH1Q8IUQ4 282 aa14.26□□□□□ -0.13
SPIDR-209ENST00000519141 GMCL1P1Q8NEA9 526 aa14.26□□□□□ -0.13
SPIDR-209ENST00000519141 CCDC148Q8NFR7 591 aa14.26□□□□□ -0.13
SPIDR-209ENST00000519141 GPKOWQ92917 476 aaPredicted RBP eCLIP14.26□□□□□ -0.13
SPIDR-209ENST00000519141 SHISA4Q96DD7 197 aa14.26□□□□□ -0.13
SPIDR-209ENST00000519141 HOOK2Q96ED9 719 aa14.26□□□□□ -0.13
SPIDR-209ENST00000519141 FTOQ9C0B1 505 aaKnown RBP eCLIP14.26□□□□□ -0.13
SPIDR-209ENST00000519141 GZF1Q9H116 711 aaPredicted RBP14.26□□□□□ -0.13
SPIDR-209ENST00000519141 CPVLQ9H3G5 476 aa14.26□□□□□ -0.13
SPIDR-209ENST00000519141 POLR3EQ9NVU0 708 aa14.26□□□□□ -0.13
SPIDR-209ENST00000519141 RTEL1Q9NZ71 1219 aa14.26□□□□□ -0.13
SPIDR-209ENST00000519141 GOLGA6L4A6NEF3 574 aa14.25□□□□□ -0.13
SPIDR-209ENST00000519141 CALML3P27482 149 aa14.25□□□□□ -0.13
SPIDR-209ENST00000519141 SLC1A4P43007 532 aa14.25□□□□□ -0.13
SPIDR-209ENST00000519141 CAVIN1Q6NZI2 390 aaKnown RBP14.25□□□□□ -0.13
SPIDR-209ENST00000519141 HEATR3Q7Z4Q2 680 aa14.25□□□□□ -0.13
SPIDR-209ENST00000519141 HOMER1Q86YM7 354 aa14.25□□□□□ -0.13
SPIDR-209ENST00000519141 FAM177A1Q8N128 213 aaPredicted RBP14.25□□□□□ -0.13
SPIDR-209ENST00000519141 UBA5Q9GZZ9 404 aa14.25□□□□□ -0.13
SPIDR-209ENST00000519141 RIOX1Q9H6W3 641 aa14.25□□□□□ -0.13
SPIDR-209ENST00000519141 ADARB2Q9NS39 739 aaKnown RBP14.25□□□□□ -0.13
SPIDR-209ENST00000519141 RCOR1Q9UKL0 485 aa14.25□□□□□ -0.13
SPIDR-209ENST00000519141 YEATS4O95619 227 aa14.24□□□□□ -0.13
SPIDR-209ENST00000519141 ASNSP08243 561 aa14.24□□□□□ -0.13
SPIDR-209ENST00000519141 HTRA3P83110 453 aa14.24□□□□□ -0.13
SPIDR-209ENST00000519141 NR5A1Q13285 461 aa14.24□□□□□ -0.13
SPIDR-209ENST00000519141 STK38Q15208 465 aa14.24□□□□□ -0.13
SPIDR-209ENST00000519141 TPRNQ4KMQ1 711 aa14.24□□□□□ -0.13
SPIDR-209ENST00000519141 DCAF15Q66K64 600 aa14.24□□□□□ -0.13
SPIDR-209ENST00000519141 WWC2Q6AWC2 1192 aa14.24□□□□□ -0.13
SPIDR-209ENST00000519141 DNAJC5GQ8N7S2 189 aa14.24□□□□□ -0.13
SPIDR-209ENST00000519141 OXER1Q8TDS5 423 aa14.24□□□□□ -0.13
SPIDR-209ENST00000519141 CCDC12Q8WUD4 166 aaPredicted RBP14.24□□□□□ -0.13
SPIDR-209ENST00000519141 PIGSQ96S52 555 aa14.24□□□□□ -0.13
SPIDR-209ENST00000519141 SH2D4AQ9H788 454 aa14.24□□□□□ -0.13
SPIDR-209ENST00000519141 VAT1LQ9HCJ6 419 aa14.24□□□□□ -0.13
SPIDR-209ENST00000519141 BARHL2Q9NY43 387 aa14.24□□□□□ -0.13
SPIDR-209ENST00000519141 PPP2R3BQ9Y5P8 575 aa14.24□□□□□ -0.13
SPIDR-209ENST00000519141 DOCK1Q14185 1865 aa14.24□□□□□ -0.13
SPIDR-209ENST00000519141 F5H6K3 240 aa14.23□□□□□ -0.13
SPIDR-209ENST00000519141 hCG_1984214I3L0E3 225 aa14.23□□□□□ -0.13
SPIDR-209ENST00000519141 NDUFB10O96000 172 aa14.23□□□□□ -0.13
SPIDR-209ENST00000519141 NASPP49321 788 aaPredicted RBP14.23□□□□□ -0.13
SPIDR-209ENST00000519141 HIRAP54198 1017 aaPredicted RBP14.23□□□□□ -0.13
SPIDR-209ENST00000519141 KLRC3Q07444 240 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms