RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 TP53P04637 393 aaPredicted RBP6.09□□□□□ -1.43
SKP1-205ENST00000519054 GNL2Q13823 731 aaKnown RBP6.09□□□□□ -1.43
SKP1-205ENST00000519054 PPP2R5EQ16537 467 aa6.09□□□□□ -1.43
SKP1-205ENST00000519054 VPS37DQ86XT2 251 aa6.09□□□□□ -1.43
SKP1-205ENST00000519054 OR6P1Q8NGX9 317 aa6.09□□□□□ -1.43
SKP1-205ENST00000519054 ENOX1Q8TC92 643 aaKnown RBP6.09□□□□□ -1.43
SKP1-205ENST00000519054 SYTL5Q8TDW5 730 aaPredicted RBP6.09□□□□□ -1.43
SKP1-205ENST00000519054 ANAPC16Q96DE5 110 aa6.09□□□□□ -1.43
SKP1-205ENST00000519054 ADAMTS10Q9H324 1103 aa6.09□□□□□ -1.43
SKP1-205ENST00000519054 IGSF5Q9NSI5 407 aa6.09□□□□□ -1.43
SKP1-205ENST00000519054 C19orf73Q9NVV2 129 aa6.09□□□□□ -1.43
SKP1-205ENST00000519054 GFOD1Q9NXC2 390 aa6.09□□□□□ -1.43
SKP1-205ENST00000519054 PCDHB12Q9Y5F1 795 aa6.09□□□□□ -1.43
SKP1-205ENST00000519054 LTBP3Q9NS15 1303 aa6.08□□□□□ -1.44
SKP1-205ENST00000519054 SIGLEC6O43699 453 aa6.08□□□□□ -1.44
SKP1-205ENST00000519054 JUNBP17275 347 aaPredicted RBP6.08□□□□□ -1.44
SKP1-205ENST00000519054 HK2P52789 917 aa6.08□□□□□ -1.44
SKP1-205ENST00000519054 AXDND1Q5T1B0 1012 aaPredicted RBP6.08□□□□□ -1.44
SKP1-205ENST00000519054 DCAF15Q66K64 600 aa6.08□□□□□ -1.44
SKP1-205ENST00000519054 FAM169BQ8N8A8 192 aa6.08□□□□□ -1.44
SKP1-205ENST00000519054 DAGLBQ8NCG7 672 aa6.08□□□□□ -1.44
SKP1-205ENST00000519054 FLAD1Q8NFF5 587 aa6.08□□□□□ -1.44
SKP1-205ENST00000519054 TCTN2Q96GX1 697 aa6.08□□□□□ -1.44
SKP1-205ENST00000519054 TINF2Q9BSI4 451 aa6.08□□□□□ -1.44
SKP1-205ENST00000519054 CHST7Q9NS84 486 aa6.08□□□□□ -1.44
SKP1-205ENST00000519054 TMEM59LQ9UK28 342 aa6.08□□□□□ -1.44
SKP1-205ENST00000519054 ZNF214Q9UL59 606 aaPredicted RBP6.08□□□□□ -1.44
SKP1-205ENST00000519054 STRIP2Q9ULQ0 834 aa6.08□□□□□ -1.44
SKP1-205ENST00000519054 A0A1W2PQH9 124 aa6.07□□□□□ -1.44
SKP1-205ENST00000519054 SHOXO15266 292 aa6.07□□□□□ -1.44
SKP1-205ENST00000519054 GDNFP39905 211 aa6.07□□□□□ -1.44
SKP1-205ENST00000519054 C7orf61Q8IZ16 206 aa6.07□□□□□ -1.44
SKP1-205ENST00000519054 USHBP1Q8N6Y0 703 aa6.07□□□□□ -1.44
SKP1-205ENST00000519054 ZNF655Q8N720 491 aaPredicted RBP6.07□□□□□ -1.44
SKP1-205ENST00000519054 CCDC120Q96HB5 630 aa6.07□□□□□ -1.44
SKP1-205ENST00000519054 FOXP3Q9BZS1 431 aa6.07□□□□□ -1.44
SKP1-205ENST00000519054 PCDHB10Q9UN67 800 aa6.07□□□□□ -1.44
SKP1-205ENST00000519054 MRVI1Q9Y6F6 885 aa6.07□□□□□ -1.44
SKP1-205ENST00000519054 SSU72P8A0A1W2PR75 194 aa6.06□□□□□ -1.44
SKP1-205ENST00000519054 PAX4O43316 350 aa6.06□□□□□ -1.44
SKP1-205ENST00000519054 FKTNO75072 461 aa6.06□□□□□ -1.44
SKP1-205ENST00000519054 SSBP05455 408 aaKnown RBP eCLIP6.06□□□□□ -1.44
SKP1-205ENST00000519054 SYPP08247 313 aa6.06□□□□□ -1.44
SKP1-205ENST00000519054 PCBP3P57721 371 aaKnown RBP6.06□□□□□ -1.44
SKP1-205ENST00000519054 ERVFC1P60507 584 aa6.06□□□□□ -1.44
SKP1-205ENST00000519054 TEKQ02763 1124 aa6.06□□□□□ -1.44
SKP1-205ENST00000519054 BBS9Q3SYG4 887 aa6.06□□□□□ -1.44
SKP1-205ENST00000519054 GNPTABQ3T906 1256 aa6.06□□□□□ -1.44
SKP1-205ENST00000519054 FYB2Q5VWT5 728 aa6.06□□□□□ -1.44
SKP1-205ENST00000519054 C19orf47Q8N9M1 422 aaKnown RBP6.06□□□□□ -1.44
SKP1-205ENST00000519054 FAM168AQ92567 244 aa6.06□□□□□ -1.44
SKP1-205ENST00000519054 SMARCC1Q92922 1105 aaPredicted RBP6.06□□□□□ -1.44
SKP1-205ENST00000519054 SYTL4Q96C24 671 aaPredicted RBP6.06□□□□□ -1.44
SKP1-205ENST00000519054 ASIC4Q96FT7 647 aa6.06□□□□□ -1.44
SKP1-205ENST00000519054 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.06□□□□□ -1.44
SKP1-205ENST00000519054 TCFL5Q9UL49 500 aa6.06□□□□□ -1.44
SKP1-205ENST00000519054 SLC12A7Q9Y666 1083 aa6.06□□□□□ -1.44
SKP1-205ENST00000519054 RPL10P27635 214 aaKnown RBP6.05□□□□□ -1.44
SKP1-205ENST00000519054 DNAJA1P31689 397 aaKnown RBP6.05□□□□□ -1.44
SKP1-205ENST00000519054 AFMP43652 599 aa6.05□□□□□ -1.44
SKP1-205ENST00000519054 RNF111Q6ZNA4 994 aa6.05□□□□□ -1.44
SKP1-205ENST00000519054 DSCC1Q9BVC3 393 aa6.05□□□□□ -1.44
SKP1-205ENST00000519054 PHAXQ9H814 394 aaKnown RBP6.05□□□□□ -1.44
SKP1-205ENST00000519054 ZNF451Q9Y4E5 1061 aa6.05□□□□□ -1.44
SKP1-205ENST00000519054 RNF114Q9Y508 228 aa6.05□□□□□ -1.44
SKP1-205ENST00000519054 CARMIL2Q6F5E8 1435 aa6.05□□□□□ -1.44
SKP1-205ENST00000519054 ZGLP1P0C6A0 271 aa6.04□□□□□ -1.44
SKP1-205ENST00000519054 RAC2P15153 192 aa6.04□□□□□ -1.44
SKP1-205ENST00000519054 CTSKP43235 329 aa6.04□□□□□ -1.44
SKP1-205ENST00000519054 CASP7P55210 303 aa6.04□□□□□ -1.44
SKP1-205ENST00000519054 SLC7A5Q01650 507 aa6.04□□□□□ -1.44
SKP1-205ENST00000519054 ARID5AQ03989 594 aa6.04□□□□□ -1.44
SKP1-205ENST00000519054 KCNMB1Q16558 191 aa6.04□□□□□ -1.44
SKP1-205ENST00000519054 NOL9Q5SY16 702 aaKnown RBP6.04□□□□□ -1.44
SKP1-205ENST00000519054 CRTC3Q6UUV7 619 aa6.04□□□□□ -1.44
SKP1-205ENST00000519054 WAPLQ7Z5K2 1190 aa6.04□□□□□ -1.44
SKP1-205ENST00000519054 ZSWIM9Q86XI8 627 aa6.04□□□□□ -1.44
SKP1-205ENST00000519054 LINC00116Q8NCU8 138 aa6.04□□□□□ -1.44
SKP1-205ENST00000519054 DHX38Q92620 1227 aaKnown RBP6.04□□□□□ -1.44
SKP1-205ENST00000519054 BRF1Q92994 677 aa6.04□□□□□ -1.44
SKP1-205ENST00000519054 KIRREL1Q96J84 757 aa6.04□□□□□ -1.44
SKP1-205ENST00000519054 GP6Q9HCN6 339 aa6.04□□□□□ -1.44
SKP1-205ENST00000519054 EBF1Q9UH73 591 aa6.04□□□□□ -1.44
SKP1-205ENST00000519054 TMEM82A0PJX8 343 aa6.03□□□□□ -1.44
SKP1-205ENST00000519054 SMAD7O15105 426 aaKnown RBP6.03□□□□□ -1.44
SKP1-205ENST00000519054 CBFA2T2O43439 604 aa6.03□□□□□ -1.44
SKP1-205ENST00000519054 FGRP09769 529 aa6.03□□□□□ -1.44
SKP1-205ENST00000519054 CD247P20963 164 aa6.03□□□□□ -1.44
SKP1-205ENST00000519054 TRHRP34981 398 aaPredicted RBP6.03□□□□□ -1.44
SKP1-205ENST00000519054 ZNF445P59923 1031 aa6.03□□□□□ -1.44
SKP1-205ENST00000519054 ANKRD39Q53RE8 183 aa6.03□□□□□ -1.44
SKP1-205ENST00000519054 ZPBP2Q6X784 338 aa6.03□□□□□ -1.44
SKP1-205ENST00000519054 KLHL6Q8WZ60 621 aa6.03□□□□□ -1.44
SKP1-205ENST00000519054 HAUS7Q99871 368 aa6.03□□□□□ -1.44
SKP1-205ENST00000519054 C19orf44Q9H6X5 657 aa6.03□□□□□ -1.44
SKP1-205ENST00000519054 PRR13Q9NZ81 148 aa6.03□□□□□ -1.44
SKP1-205ENST00000519054 ZMYM5Q9UJ78 669 aa6.03□□□□□ -1.44
SKP1-205ENST00000519054 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.03□□□□□ -1.44
SKP1-205ENST00000519054 HPXP02790 462 aa6.02□□□□□ -1.45
SKP1-205ENST00000519054 ITGA4P13612 1032 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms