RNA–Protein interactions for RNA: ENST00000518930.1

PCM1-209, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-209ENST00000518930 CCDC96Q2M329 555 aa28.39■■■□□ 2.14
PCM1-209ENST00000518930 NUP88Q99567 741 aaPredicted RBP28.39■■■□□ 2.14
PCM1-209ENST00000518930 UPF3BQ9BZI7 483 aaKnown RBP28.39■■■□□ 2.14
PCM1-209ENST00000518930 BMP3P12645 472 aa28.38■■■□□ 2.13
PCM1-209ENST00000518930 CATIPQ7Z7H3 387 aa28.38■■■□□ 2.13
PCM1-209ENST00000518930 CHMP4CQ96CF2 233 aa28.38■■■□□ 2.13
PCM1-209ENST00000518930 GPHNQ9NQX3 736 aaPredicted RBP28.38■■■□□ 2.13
PCM1-209ENST00000518930 RNF186Q9NXI6 227 aa28.38■■■□□ 2.13
PCM1-209ENST00000518930 CA12O43570 354 aa28.37■■■□□ 2.13
PCM1-209ENST00000518930 CATSPERGQ6ZRH7 1159 aa28.37■■■□□ 2.13
PCM1-209ENST00000518930 SMCR8Q8TEV9 937 aaPredicted RBP28.37■■■□□ 2.13
PCM1-209ENST00000518930 ASCC2Q9H1I8 757 aaPredicted RBP28.37■■■□□ 2.13
PCM1-209ENST00000518930 SENP2Q9HC62 589 aa28.37■■■□□ 2.13
PCM1-209ENST00000518930 ZFYVE28Q9HCC9 887 aa28.37■■■□□ 2.13
PCM1-209ENST00000518930 SAGE1Q9NXZ1 904 aa28.37■■■□□ 2.13
PCM1-209ENST00000518930 TRPA1O75762 1119 aa28.36■■■□□ 2.13
PCM1-209ENST00000518930 FLOT1O75955 427 aa28.36■■■□□ 2.13
PCM1-209ENST00000518930 PDHBP11177 359 aa28.36■■■□□ 2.13
PCM1-209ENST00000518930 Q6ZUG5 572 aa28.36■■■□□ 2.13
PCM1-209ENST00000518930 PARP14Q460N5 1801 aa28.36■■■□□ 2.13
PCM1-209ENST00000518930 CYP2C8P10632 490 aa28.35■■■□□ 2.13
PCM1-209ENST00000518930 IKQ13123 557 aaPredicted RBP28.35■■■□□ 2.13
PCM1-209ENST00000518930 RASGRP2Q7LDG7 609 aa28.35■■■□□ 2.13
PCM1-209ENST00000518930 TBC1D32Q96NH3 1257 aa28.35■■■□□ 2.13
PCM1-209ENST00000518930 PDRG1Q9NUG6 133 aa28.35■■■□□ 2.13
PCM1-209ENST00000518930 WBP1LQ9NX94 342 aa28.35■■■□□ 2.13
PCM1-209ENST00000518930 SLC12A7Q9Y666 1083 aa28.35■■■□□ 2.13
PCM1-209ENST00000518930 DDAH1O94760 285 aa28.34■■■□□ 2.13
PCM1-209ENST00000518930 STAT2P52630 851 aa28.34■■■□□ 2.13
PCM1-209ENST00000518930 CRHR2Q13324 411 aa28.34■■■□□ 2.13
PCM1-209ENST00000518930 SAMD1Q6SPF0 538 aaPredicted RBP28.34■■■□□ 2.13
PCM1-209ENST00000518930 SYNE3Q6ZMZ3 975 aa28.34■■■□□ 2.13
PCM1-209ENST00000518930 SGMS1Q86VZ5 419 aa28.34■■■□□ 2.13
PCM1-209ENST00000518930 ZNF654Q8IZM8 581 aa28.34■■■□□ 2.13
PCM1-209ENST00000518930 FEM1BQ9UK73 627 aa28.34■■■□□ 2.13
PCM1-209ENST00000518930 SNHG28P0DPA3 235 aa28.33■■■□□ 2.13
PCM1-209ENST00000518930 COG2Q14746 738 aa28.33■■■□□ 2.13
PCM1-209ENST00000518930 ASPRV1Q53RT3 343 aa28.33■■■□□ 2.13
PCM1-209ENST00000518930 GPATCH4Q5T3I0 446 aaKnown RBP28.33■■■□□ 2.13
PCM1-209ENST00000518930 KCTD1Q719H9 257 aa28.33■■■□□ 2.13
PCM1-209ENST00000518930 GTF3C2Q8WUA4 911 aaPredicted RBP28.33■■■□□ 2.13
PCM1-209ENST00000518930 BRF1Q92994 677 aa28.33■■■□□ 2.13
PCM1-209ENST00000518930 FRMPD2Q68DX3 1309 aaPredicted RBP28.33■■■□□ 2.13
PCM1-209ENST00000518930 TMEM232C9JQI7 657 aa28.32■■■□□ 2.12
PCM1-209ENST00000518930 PARP1P09874 1014 aaKnown RBP28.32■■■□□ 2.12
PCM1-209ENST00000518930 CALM1P0DP23 149 aa28.32■■■□□ 2.12
PCM1-209ENST00000518930 CALM2P0DP24 149 aa28.32■■■□□ 2.12
PCM1-209ENST00000518930 CALM3P0DP25 149 aa28.32■■■□□ 2.12
PCM1-209ENST00000518930 HERVK_113P62684 666 aa28.32■■■□□ 2.12
PCM1-209ENST00000518930 ZNF543Q08ER8 600 aa28.32■■■□□ 2.12
PCM1-209ENST00000518930 FAM160B2Q86V87 743 aa28.32■■■□□ 2.12
PCM1-209ENST00000518930 FBXL16Q8N461 479 aa28.32■■■□□ 2.12
PCM1-209ENST00000518930 NUP133Q8WUM0 1156 aa28.32■■■□□ 2.12
PCM1-209ENST00000518930 SLF1Q9BQI6 1058 aa28.32■■■□□ 2.12
PCM1-209ENST00000518930 CFHR5Q9BXR6 569 aa28.32■■■□□ 2.12
PCM1-209ENST00000518930 HOXC10Q9NYD6 342 aa28.32■■■□□ 2.12
PCM1-209ENST00000518930 MYPNQ86TC9 1320 aa28.32■■■□□ 2.12
PCM1-209ENST00000518930 TBC1D8O95759 1140 aa28.31■■■□□ 2.12
PCM1-209ENST00000518930 CHURC1Q8WUH1 139 aa28.31■■■□□ 2.12
PCM1-209ENST00000518930 P2RX7Q99572 595 aaKnown RBP28.31■■■□□ 2.12
PCM1-209ENST00000518930 GPCPD1Q9NPB8 672 aa28.31■■■□□ 2.12
PCM1-209ENST00000518930 FBXO28Q9NVF7 368 aa28.31■■■□□ 2.12
PCM1-209ENST00000518930 NAP1L2Q9ULW6 460 aaPredicted RBP28.31■■■□□ 2.12
PCM1-209ENST00000518930 RLFQ13129 1914 aa28.31■■■□□ 2.12
PCM1-209ENST00000518930 A0A0G2JMZ2 1700 aa28.3■■■□□ 2.12
PCM1-209ENST00000518930 KLF18A0A0U1RQI7 1052 aa28.3■■■□□ 2.12
PCM1-209ENST00000518930 TLR2O60603 784 aa28.3■■■□□ 2.12
PCM1-209ENST00000518930 GCLCP48506 637 aaPredicted RBP28.3■■■□□ 2.12
PCM1-209ENST00000518930 APOA5Q6Q788 366 aa28.3■■■□□ 2.12
PCM1-209ENST00000518930 CTCFLQ8NI51 663 aaPredicted RBP28.3■■■□□ 2.12
PCM1-209ENST00000518930 MYL10Q9BUA6 226 aa28.3■■■□□ 2.12
PCM1-209ENST00000518930 AGXT2Q9BYV1 514 aa28.3■■■□□ 2.12
PCM1-209ENST00000518930 PPP1R9AQ9ULJ8 1098 aa28.3■■■□□ 2.12
PCM1-209ENST00000518930 SPDYE16A6NNV3 312 aaPredicted RBP28.29■■■□□ 2.12
PCM1-209ENST00000518930 DSG3P32926 999 aa28.29■■■□□ 2.12
PCM1-209ENST00000518930 NEK4P51957 841 aa28.29■■■□□ 2.12
PCM1-209ENST00000518930 APOBRQ0VD83 1088 aa28.29■■■□□ 2.12
PCM1-209ENST00000518930 TROAPQ12815 778 aa28.29■■■□□ 2.12
PCM1-209ENST00000518930 GRM4Q14833 912 aa28.29■■■□□ 2.12
PCM1-209ENST00000518930 MICU3Q86XE3 530 aa28.29■■■□□ 2.12
PCM1-209ENST00000518930 PRPF38AQ8NAV1 312 aaKnown RBP28.29■■■□□ 2.12
PCM1-209ENST00000518930 KIFC2Q96AC6 838 aa28.29■■■□□ 2.12
PCM1-209ENST00000518930 PCNTO95613 3336 aa28.29■■■□□ 2.12
PCM1-209ENST00000518930 ADGRA2Q96PE1 1338 aa28.28■■■□□ 2.12
PCM1-209ENST00000518930 ZBTB43O43298 467 aa28.28■■■□□ 2.12
PCM1-209ENST00000518930 PLA2G6O60733 806 aa28.28■■■□□ 2.12
PCM1-209ENST00000518930 GOLGA8HP0CJ92 632 aa28.28■■■□□ 2.12
PCM1-209ENST00000518930 KIF5BP33176 963 aa28.28■■■□□ 2.12
PCM1-209ENST00000518930 ANKRD1Q15327 319 aa28.28■■■□□ 2.12
PCM1-209ENST00000518930 MAP3K14Q99558 947 aa28.28■■■□□ 2.12
PCM1-209ENST00000518930 KIF2CQ99661 725 aa28.28■■■□□ 2.12
PCM1-209ENST00000518930 CTDP1Q9Y5B0 961 aaPredicted RBP28.28■■■□□ 2.12
PCM1-209ENST00000518930 GOLGA8BA8MQT2 603 aa28.27■■■□□ 2.12
PCM1-209ENST00000518930 TOB2Q14106 344 aaPredicted RBP28.27■■■□□ 2.12
PCM1-209ENST00000518930 RABEP1Q15276 862 aa28.27■■■□□ 2.12
PCM1-209ENST00000518930 LBX2Q6XYB7 198 aa28.27■■■□□ 2.12
PCM1-209ENST00000518930 ATG4CQ96DT6 458 aa28.27■■■□□ 2.12
PCM1-209ENST00000518930 CPA4Q9UI42 421 aa28.27■■■□□ 2.12
PCM1-209ENST00000518930 BRPF3Q9ULD4 1205 aa28.27■■■□□ 2.12
PCM1-209ENST00000518930 HSPA1AP0DMV8 641 aaKnown RBP28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms