RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 ALKBH8Q96BT7 664 aaKnown RBP8.4□□□□□ -1.06
CCDC6-203ENST00000518638 C7orf69Q9H7B7 122 aa8.4□□□□□ -1.06
CCDC6-203ENST00000518638 LTBP3Q9NS15 1303 aa8.39□□□□□ -1.07
CCDC6-203ENST00000518638 PRR19A6NJB7 356 aa8.39□□□□□ -1.07
CCDC6-203ENST00000518638 J3QW42 95 aa8.39□□□□□ -1.07
CCDC6-203ENST00000518638 GHRHP01286 108 aa8.39□□□□□ -1.07
CCDC6-203ENST00000518638 CES1P23141 567 aa8.39□□□□□ -1.07
CCDC6-203ENST00000518638 CRKLP46109 303 aaKnown RBP8.39□□□□□ -1.07
CCDC6-203ENST00000518638 DDR1Q08345 913 aa8.39□□□□□ -1.07
CCDC6-203ENST00000518638 SOGA3Q5TF21 947 aa8.39□□□□□ -1.07
CCDC6-203ENST00000518638 TMC7Q7Z402 723 aa8.39□□□□□ -1.07
CCDC6-203ENST00000518638 KANSL3Q9P2N6 904 aa8.39□□□□□ -1.07
CCDC6-203ENST00000518638 SALL4Q9UJQ4 1053 aa8.39□□□□□ -1.07
CCDC6-203ENST00000518638 FER1L6Q2WGJ9 1857 aa8.38□□□□□ -1.07
CCDC6-203ENST00000518638 AFDNP55196 1824 aaKnown RBP8.38□□□□□ -1.07
CCDC6-203ENST00000518638 PASKQ96RG2 1323 aa8.38□□□□□ -1.07
CCDC6-203ENST00000518638 RASSF10A6NK89 507 aa8.38□□□□□ -1.07
CCDC6-203ENST00000518638 H0YIN7 160 aa8.38□□□□□ -1.07
CCDC6-203ENST00000518638 NFKBIEO00221 500 aa8.38□□□□□ -1.07
CCDC6-203ENST00000518638 NEFLP07196 543 aa8.38□□□□□ -1.07
CCDC6-203ENST00000518638 HSPA8P11142 646 aaKnown RBP8.38□□□□□ -1.07
CCDC6-203ENST00000518638 TM4SF1P30408 202 aa8.38□□□□□ -1.07
CCDC6-203ENST00000518638 TRIM42Q8IWZ5 723 aa8.38□□□□□ -1.07
CCDC6-203ENST00000518638 MUC3BQ9H195 1237 aa8.38□□□□□ -1.07
CCDC6-203ENST00000518638 RBSNQ9H1K0 784 aa8.38□□□□□ -1.07
CCDC6-203ENST00000518638 ZFYVE28Q9HCC9 887 aa8.38□□□□□ -1.07
CCDC6-203ENST00000518638 THSD7BQ9C0I4 1608 aa8.37□□□□□ -1.07
CCDC6-203ENST00000518638 WASHC2AQ641Q2 1341 aa8.37□□□□□ -1.07
CCDC6-203ENST00000518638 CCDC85CA6NKD9 419 aa8.37□□□□□ -1.07
CCDC6-203ENST00000518638 EREGO14944 169 aa8.37□□□□□ -1.07
CCDC6-203ENST00000518638 CABP4P57796 275 aa8.37□□□□□ -1.07
CCDC6-203ENST00000518638 NCAPG2Q86XI2 1143 aa8.37□□□□□ -1.07
CCDC6-203ENST00000518638 CEP120Q8N960 986 aa8.37□□□□□ -1.07
CCDC6-203ENST00000518638 RGS22Q8NE09 1264 aa8.37□□□□□ -1.07
CCDC6-203ENST00000518638 SPACA7Q96KW9 195 aa8.37□□□□□ -1.07
CCDC6-203ENST00000518638 ASB16Q96NS5 453 aa8.37□□□□□ -1.07
CCDC6-203ENST00000518638 SRP68Q9UHB9 627 aaKnown RBP8.37□□□□□ -1.07
CCDC6-203ENST00000518638 TJP1Q07157 1748 aa8.37□□□□□ -1.07
CCDC6-203ENST00000518638 ADAMTS7Q9UKP4 1686 aa8.37□□□□□ -1.07
CCDC6-203ENST00000518638 HMX2A2RU54 273 aa8.36□□□□□ -1.07
CCDC6-203ENST00000518638 ECE1P42892 770 aa8.36□□□□□ -1.07
CCDC6-203ENST00000518638 DEFB115Q30KQ5 88 aa8.36□□□□□ -1.07
CCDC6-203ENST00000518638 AMOTQ4VCS5 1084 aa8.36□□□□□ -1.07
CCDC6-203ENST00000518638 ACAD11Q709F0 780 aa8.36□□□□□ -1.07
CCDC6-203ENST00000518638 PNMA8AQ86V59 439 aaPredicted RBP8.36□□□□□ -1.07
CCDC6-203ENST00000518638 C2CD5Q86YS7 1000 aa8.36□□□□□ -1.07
CCDC6-203ENST00000518638 CACTIN-AS1Q8N1I8 211 aa8.36□□□□□ -1.07
CCDC6-203ENST00000518638 NIF3L1Q9GZT8 377 aa8.36□□□□□ -1.07
CCDC6-203ENST00000518638 GZF1Q9H116 711 aaPredicted RBP8.36□□□□□ -1.07
CCDC6-203ENST00000518638 TAOK3Q9H2K8 898 aa8.36□□□□□ -1.07
CCDC6-203ENST00000518638 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.36□□□□□ -1.07
CCDC6-203ENST00000518638 PPM1GO15355 546 aaPredicted RBP8.35□□□□□ -1.07
CCDC6-203ENST00000518638 TREHO43280 583 aa8.35□□□□□ -1.07
CCDC6-203ENST00000518638 CA12O43570 354 aa8.35□□□□□ -1.07
CCDC6-203ENST00000518638 SERPINB2P05120 415 aa8.35□□□□□ -1.07
CCDC6-203ENST00000518638 C8AP07357 584 aa8.35□□□□□ -1.07
CCDC6-203ENST00000518638 PDE6BP35913 854 aa8.35□□□□□ -1.07
CCDC6-203ENST00000518638 ORC1Q13415 861 aa8.35□□□□□ -1.07
CCDC6-203ENST00000518638 PLEKHO1Q53GL0 409 aaPredicted RBP8.35□□□□□ -1.07
CCDC6-203ENST00000518638 ZSCAN29Q8IWY8 852 aaPredicted RBP8.35□□□□□ -1.07
CCDC6-203ENST00000518638 ABI1Q8IZP0 508 aa8.35□□□□□ -1.07
CCDC6-203ENST00000518638 FAM46AQ96IP4 442 aaKnown RBP8.35□□□□□ -1.07
CCDC6-203ENST00000518638 TESK2Q96S53 571 aa8.35□□□□□ -1.07
CCDC6-203ENST00000518638 ARFGEF2Q9Y6D5 1785 aa8.35□□□□□ -1.07
CCDC6-203ENST00000518638 COL15A1P39059 1388 aa8.35□□□□□ -1.07
CCDC6-203ENST00000518638 SOS1Q07889 1333 aaPredicted RBP8.34□□□□□ -1.07
CCDC6-203ENST00000518638 WDR33Q9C0J8 1336 aaKnown RBP8.34□□□□□ -1.07
CCDC6-203ENST00000518638 CPNE3O75131 537 aaKnown RBP8.34□□□□□ -1.07
CCDC6-203ENST00000518638 EDN3P14138 238 aa8.34□□□□□ -1.07
CCDC6-203ENST00000518638 ATP11AP98196 1134 aa8.34□□□□□ -1.07
CCDC6-203ENST00000518638 DSC3Q14574 896 aa8.34□□□□□ -1.07
CCDC6-203ENST00000518638 NFIXQ14938 502 aa8.34□□□□□ -1.07
CCDC6-203ENST00000518638 C1orf141Q5JVX7 400 aa8.34□□□□□ -1.07
CCDC6-203ENST00000518638 USPL1Q5W0Q7 1092 aa8.34□□□□□ -1.07
CCDC6-203ENST00000518638 POU5F2Q8N7G0 328 aa8.34□□□□□ -1.07
CCDC6-203ENST00000518638 SHKBP1Q8TBC3 707 aa8.34□□□□□ -1.07
CCDC6-203ENST00000518638 DNAJC25Q9H1X3 360 aa8.34□□□□□ -1.07
CCDC6-203ENST00000518638 TAF1DQ9H5J8 278 aaPredicted RBP8.34□□□□□ -1.07
CCDC6-203ENST00000518638 NARFQ9UHQ1 456 aa8.34□□□□□ -1.07
CCDC6-203ENST00000518638 PPME1Q9Y570 386 aa8.34□□□□□ -1.07
CCDC6-203ENST00000518638 ADAMTSL1Q8N6G6 1762 aa8.33□□□□□ -1.08
CCDC6-203ENST00000518638 ST20-MTHFSA0A0A6YYL1 179 aa8.33□□□□□ -1.08
CCDC6-203ENST00000518638 DDNO94850 711 aaPredicted RBP8.33□□□□□ -1.08
CCDC6-203ENST00000518638 WISP1O95388 367 aa8.33□□□□□ -1.08
CCDC6-203ENST00000518638 MTHFSP49914 203 aa8.33□□□□□ -1.08
CCDC6-203ENST00000518638 GALNT12Q8IXK2 581 aa8.33□□□□□ -1.08
CCDC6-203ENST00000518638 ZNF622Q969S3 477 aaKnown RBP eCLIP8.33□□□□□ -1.081e-7■□□□□ 9.8
CCDC6-203ENST00000518638 MYRFLQ96LU7 910 aa8.33□□□□□ -1.08
CCDC6-203ENST00000518638 PBX4Q9BYU1 374 aa8.33□□□□□ -1.08
CCDC6-203ENST00000518638 RASSF4Q9H2L5 321 aa8.33□□□□□ -1.08
CCDC6-203ENST00000518638 HACL1Q9UJ83 578 aa8.33□□□□□ -1.08
CCDC6-203ENST00000518638 ABT1Q9ULW3 272 aaKnown RBP8.33□□□□□ -1.08
CCDC6-203ENST00000518638 EIF1AYO14602 144 aaKnown RBP8.32□□□□□ -1.08
CCDC6-203ENST00000518638 SMNDC1O75940 238 aaKnown RBP eCLIP8.32□□□□□ -1.08
CCDC6-203ENST00000518638 ACPPP15309 386 aa8.32□□□□□ -1.08
CCDC6-203ENST00000518638 EAPPQ56P03 285 aaPredicted RBP8.32□□□□□ -1.08
CCDC6-203ENST00000518638 ZNF530Q6P9A1 599 aaPredicted RBP8.32□□□□□ -1.08
CCDC6-203ENST00000518638 GALNT11Q8NCW6 608 aa8.32□□□□□ -1.08
CCDC6-203ENST00000518638 ASIC4Q96FT7 647 aa8.32□□□□□ -1.08
CCDC6-203ENST00000518638 CSRNP1Q96S65 589 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms