RNA–Protein interactions for RNA: ENST00000518542.1

CSGALNACT1-206, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-206ENST00000518542 STX8Q9UNK0 236 aa9.05□□□□□ -0.96
CSGALNACT1-206ENST00000518542 IGKV6D-41A0A0C4DH26 115 aa9.04□□□□□ -0.96
CSGALNACT1-206ENST00000518542 ERICH2A1L162 156 aa9.04□□□□□ -0.96
CSGALNACT1-206ENST00000518542 RAD21O60216 631 aa9.04□□□□□ -0.96
CSGALNACT1-206ENST00000518542 HMGB1P09429 215 aaKnown RBP9.04□□□□□ -0.96
CSGALNACT1-206ENST00000518542 ANP32AP39687 249 aaKnown RBP9.04□□□□□ -0.96
CSGALNACT1-206ENST00000518542 HMGCS2P54868 508 aa9.04□□□□□ -0.96
CSGALNACT1-206ENST00000518542 FOXK1P85037 733 aa9.04□□□□□ -0.96
CSGALNACT1-206ENST00000518542 PABPC4Q13310 644 aaKnown RBP eCLIP9.04□□□□□ -0.96
CSGALNACT1-206ENST00000518542 ZYXQ15942 572 aaKnown RBP9.04□□□□□ -0.96
CSGALNACT1-206ENST00000518542 SH3D19Q5HYK7 790 aa9.04□□□□□ -0.96
CSGALNACT1-206ENST00000518542 PPP1R15BQ5SWA1 713 aa9.04□□□□□ -0.96
CSGALNACT1-206ENST00000518542 CLEC10AQ8IUN9 316 aa9.04□□□□□ -0.96
CSGALNACT1-206ENST00000518542 ACER1Q8TDN7 264 aa9.04□□□□□ -0.96
CSGALNACT1-206ENST00000518542 BRI3BPQ8WY22 251 aa9.04□□□□□ -0.96
CSGALNACT1-206ENST00000518542 TTC14Q96N46 770 aa9.04□□□□□ -0.96
CSGALNACT1-206ENST00000518542 ZIC5Q96T25 663 aa9.04□□□□□ -0.96
CSGALNACT1-206ENST00000518542 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.04□□□□□ -0.96
CSGALNACT1-206ENST00000518542 ZSWIM5Q9P217 1185 aa9.04□□□□□ -0.96
CSGALNACT1-206ENST00000518542 SYNPO2Q9UMS6 1093 aa9.04□□□□□ -0.96
CSGALNACT1-206ENST00000518542 TMX2Q9Y320 296 aa9.04□□□□□ -0.96
CSGALNACT1-206ENST00000518542 LOC285556D6RIA3 1793 aa9.04□□□□□ -0.96
CSGALNACT1-206ENST00000518542 A0A1W2PRG0 241 aa9.03□□□□□ -0.96
CSGALNACT1-206ENST00000518542 NMT2O60551 498 aa9.03□□□□□ -0.96
CSGALNACT1-206ENST00000518542 PSMA5P28066 241 aa9.03□□□□□ -0.96
CSGALNACT1-206ENST00000518542 MCM5P33992 734 aa9.03□□□□□ -0.96
CSGALNACT1-206ENST00000518542 STOX1Q6ZVD7 989 aa9.03□□□□□ -0.96
CSGALNACT1-206ENST00000518542 ANKRD23Q86SG2 305 aa9.03□□□□□ -0.96
CSGALNACT1-206ENST00000518542 DGKHQ86XP1 1220 aa9.03□□□□□ -0.96
CSGALNACT1-206ENST00000518542 SIAH1Q8IUQ4 282 aa9.03□□□□□ -0.96
CSGALNACT1-206ENST00000518542 LPAR1Q92633 364 aa9.03□□□□□ -0.96
CSGALNACT1-206ENST00000518542 KCNB2Q92953 911 aa9.03□□□□□ -0.96
CSGALNACT1-206ENST00000518542 MKL1Q969V6 931 aa9.03□□□□□ -0.96
CSGALNACT1-206ENST00000518542 C12orf42Q96LP6 360 aa9.03□□□□□ -0.96
CSGALNACT1-206ENST00000518542 NEK1Q96PY6 1258 aa9.03□□□□□ -0.96
CSGALNACT1-206ENST00000518542 ZSCAN10Q96SZ4 725 aaPredicted RBP9.03□□□□□ -0.96
CSGALNACT1-206ENST00000518542 ZKSCAN3Q9BRR0 538 aa9.03□□□□□ -0.96
CSGALNACT1-206ENST00000518542 VCPKMTQ9H867 229 aa9.03□□□□□ -0.96
CSGALNACT1-206ENST00000518542 UPF2Q9HAU5 1272 aaKnown RBP9.03□□□□□ -0.96
CSGALNACT1-206ENST00000518542 ZCCHC17Q9NP64 241 aaKnown RBP9.03□□□□□ -0.96
CSGALNACT1-206ENST00000518542 IL17RBQ9NRM6 502 aa9.03□□□□□ -0.96
CSGALNACT1-206ENST00000518542 AGTPBP1Q9UPW5 1226 aa9.03□□□□□ -0.96
CSGALNACT1-206ENST00000518542 TAF6LQ9Y6J9 622 aa9.03□□□□□ -0.96
CSGALNACT1-206ENST00000518542 BTBD19C9JJ37 291 aa9.02□□□□□ -0.97
CSGALNACT1-206ENST00000518542 PDHXO00330 501 aa9.02□□□□□ -0.97
CSGALNACT1-206ENST00000518542 IFIT3O14879 490 aaKnown RBP9.02□□□□□ -0.97
CSGALNACT1-206ENST00000518542 CA12O43570 354 aa9.02□□□□□ -0.97
CSGALNACT1-206ENST00000518542 TOP1P11387 765 aaKnown RBP9.02□□□□□ -0.97
CSGALNACT1-206ENST00000518542 OSBPP22059 807 aa9.02□□□□□ -0.97
CSGALNACT1-206ENST00000518542 DGKZQ13574 1117 aa9.02□□□□□ -0.97
CSGALNACT1-206ENST00000518542 IFIT1BQ5T764 474 aaKnown RBP9.02□□□□□ -0.97
CSGALNACT1-206ENST00000518542 CYB5R4Q7L1T6 521 aa9.02□□□□□ -0.97
CSGALNACT1-206ENST00000518542 MB21D2Q8IYB1 491 aaPredicted RBP9.02□□□□□ -0.97
CSGALNACT1-206ENST00000518542 SLAIN1Q8ND83 568 aa9.02□□□□□ -0.97
CSGALNACT1-206ENST00000518542 TMEM87BQ96K49 555 aa9.02□□□□□ -0.97
CSGALNACT1-206ENST00000518542 JAKMIP1Q96N16 626 aaKnown RBP9.02□□□□□ -0.97
CSGALNACT1-206ENST00000518542 PTPN18Q99952 460 aa9.02□□□□□ -0.97
CSGALNACT1-206ENST00000518542 MTA3Q9BTC8 594 aa9.02□□□□□ -0.97
CSGALNACT1-206ENST00000518542 KAT14Q9H8E8 782 aa9.02□□□□□ -0.97
CSGALNACT1-206ENST00000518542 EMILIN3Q9NT22 766 aa9.02□□□□□ -0.97
CSGALNACT1-206ENST00000518542 PNMA3Q9UL41 463 aa9.02□□□□□ -0.97
CSGALNACT1-206ENST00000518542 SLC45A1Q9Y2W3 748 aa9.02□□□□□ -0.97
CSGALNACT1-206ENST00000518542 SNX14Q9Y5W7 946 aa9.02□□□□□ -0.97
CSGALNACT1-206ENST00000518542 TNKSO95271 1327 aa9.02□□□□□ -0.97
CSGALNACT1-206ENST00000518542 USP17L15C9J2P7 530 aa9.01□□□□□ -0.97
CSGALNACT1-206ENST00000518542 USP17L13C9JLJ4 530 aa9.01□□□□□ -0.97
CSGALNACT1-206ENST00000518542 USP17L11C9JVI0 530 aa9.01□□□□□ -0.97
CSGALNACT1-206ENST00000518542 USP17L18D6R9N7 530 aa9.01□□□□□ -0.97
CSGALNACT1-206ENST00000518542 USP17L22D6RA61 530 aa9.01□□□□□ -0.97
CSGALNACT1-206ENST00000518542 USP17L17D6RBQ6 530 aa9.01□□□□□ -0.97
CSGALNACT1-206ENST00000518542 USP17L19D6RCP7 530 aa9.01□□□□□ -0.97
CSGALNACT1-206ENST00000518542 USP17L20D6RJB6 530 aa9.01□□□□□ -0.97
CSGALNACT1-206ENST00000518542 F5H6K3 240 aa9.01□□□□□ -0.97
CSGALNACT1-206ENST00000518542 IGF2BP3O00425 579 aaKnown RBP eCLIP9.01□□□□□ -0.97
CSGALNACT1-206ENST00000518542 WDR46O15213 610 aaKnown RBP9.01□□□□□ -0.97
CSGALNACT1-206ENST00000518542 PRC1O43663 620 aa9.01□□□□□ -0.97
CSGALNACT1-206ENST00000518542 TRPA1O75762 1119 aa9.01□□□□□ -0.97
CSGALNACT1-206ENST00000518542 VCAM1P19320 739 aa9.01□□□□□ -0.97
CSGALNACT1-206ENST00000518542 HOXA7P31268 230 aaPredicted RBP9.01□□□□□ -0.97
CSGALNACT1-206ENST00000518542 NOVP48745 357 aa9.01□□□□□ -0.97
CSGALNACT1-206ENST00000518542 ANAPC15P60006 121 aa9.01□□□□□ -0.97
CSGALNACT1-206ENST00000518542 IRX3P78415 501 aaPredicted RBP9.01□□□□□ -0.97
CSGALNACT1-206ENST00000518542 FGD1P98174 961 aa9.01□□□□□ -0.97
CSGALNACT1-206ENST00000518542 KLRC3Q07444 240 aa9.01□□□□□ -0.97
CSGALNACT1-206ENST00000518542 USP17L24Q0WX57 530 aa9.01□□□□□ -0.97
CSGALNACT1-206ENST00000518542 MOGSQ13724 837 aa9.01□□□□□ -0.97
CSGALNACT1-206ENST00000518542 WTAPQ15007 396 aa9.01□□□□□ -0.97
CSGALNACT1-206ENST00000518542 TAF1CQ15572 869 aaPredicted RBP9.01□□□□□ -0.97
CSGALNACT1-206ENST00000518542 TMEM67Q5HYA8 995 aa9.01□□□□□ -0.97
CSGALNACT1-206ENST00000518542 TREML2Q5T2D2 321 aa9.01□□□□□ -0.97
CSGALNACT1-206ENST00000518542 GPAT2Q6NUI2 795 aa9.01□□□□□ -0.97
CSGALNACT1-206ENST00000518542 BLOC1S2Q6QNY1 142 aa9.01□□□□□ -0.97
CSGALNACT1-206ENST00000518542 DHX32Q7L7V1 743 aaKnown RBP9.01□□□□□ -0.97
CSGALNACT1-206ENST00000518542 PLPP6Q8IY26 295 aa9.01□□□□□ -0.97
CSGALNACT1-206ENST00000518542 SPICE1Q8N0Z3 855 aa9.01□□□□□ -0.97
CSGALNACT1-206ENST00000518542 LRRC47Q8N1G4 583 aaKnown RBP9.01□□□□□ -0.97
CSGALNACT1-206ENST00000518542 FAM43AQ8N2R8 423 aa9.01□□□□□ -0.97
CSGALNACT1-206ENST00000518542 TMTC2Q8N394 836 aa9.01□□□□□ -0.97
CSGALNACT1-206ENST00000518542 ENAHQ8N8S7 591 aaPredicted RBP9.01□□□□□ -0.97
CSGALNACT1-206ENST00000518542 GMCL1P1Q8NEA9 526 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms