RNA–Protein interactions for RNA: ENST00000517824.5

SPIDR-204, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-204ENST00000517824 ZNF75DP51815 510 aa12.3□□□□□ -0.44
SPIDR-204ENST00000517824 GRIK5Q16478 980 aa12.3□□□□□ -0.44
SPIDR-204ENST00000517824 DNTTIP2Q5QJE6 756 aaKnown RBP12.3□□□□□ -0.44
SPIDR-204ENST00000517824 HEATR3Q7Z4Q2 680 aa12.3□□□□□ -0.44
SPIDR-204ENST00000517824 FAM177A1Q8N128 213 aaPredicted RBP12.3□□□□□ -0.44
SPIDR-204ENST00000517824 SRBD1Q8N5C6 995 aaKnown RBP12.3□□□□□ -0.44
SPIDR-204ENST00000517824 TTLL6Q8N841 843 aa12.3□□□□□ -0.44
SPIDR-204ENST00000517824 ZNF579Q8NAF0 562 aaKnown RBP12.3□□□□□ -0.44
SPIDR-204ENST00000517824 SLC44A5Q8NCS7 719 aa12.3□□□□□ -0.44
SPIDR-204ENST00000517824 ANKS1AQ92625 1134 aa12.3□□□□□ -0.44
SPIDR-204ENST00000517824 RRP36Q96EU6 259 aaKnown RBP12.3□□□□□ -0.44
SPIDR-204ENST00000517824 ZC3H4Q9UPT8 1303 aaKnown RBP12.3□□□□□ -0.44
SPIDR-204ENST00000517824 USP17L3A6NCW0 530 aa12.29□□□□□ -0.44
SPIDR-204ENST00000517824 USP17L4A6NCW7 530 aa12.29□□□□□ -0.44
SPIDR-204ENST00000517824 NFKBIEO00221 500 aa12.29□□□□□ -0.44
SPIDR-204ENST00000517824 BIN1O00499 593 aa12.29□□□□□ -0.44
SPIDR-204ENST00000517824 WDHD1O75717 1129 aaPredicted RBP12.29□□□□□ -0.44
SPIDR-204ENST00000517824 LMNB1P20700 586 aa12.29□□□□□ -0.44
SPIDR-204ENST00000517824 CDC25BP30305 580 aa12.29□□□□□ -0.44
SPIDR-204ENST00000517824 RBM5P52756 815 aaKnown RBP eCLIP12.29□□□□□ -0.44
SPIDR-204ENST00000517824 DHX8Q14562 1220 aaKnown RBP12.29□□□□□ -0.44
SPIDR-204ENST00000517824 PKN1Q16512 942 aa12.29□□□□□ -0.44
SPIDR-204ENST00000517824 GALNT17Q6IS24 598 aa12.29□□□□□ -0.44
SPIDR-204ENST00000517824 SHC4Q6S5L8 630 aa12.29□□□□□ -0.44
SPIDR-204ENST00000517824 KRBA2Q6ZNG9 492 aa12.29□□□□□ -0.44
SPIDR-204ENST00000517824 USP17L1Q7RTZ2 530 aa12.29□□□□□ -0.44
SPIDR-204ENST00000517824 NEDD1Q8NHV4 660 aa12.29□□□□□ -0.44
SPIDR-204ENST00000517824 OXER1Q8TDS5 423 aa12.29□□□□□ -0.44
SPIDR-204ENST00000517824 CLIC6Q96NY7 704 aa12.29□□□□□ -0.44
SPIDR-204ENST00000517824 USP40Q9NVE5 1235 aa12.29□□□□□ -0.44
SPIDR-204ENST00000517824 CLIP2Q9UDT6 1046 aa12.29□□□□□ -0.44
SPIDR-204ENST00000517824 MKRN1Q9UHC7 482 aaKnown RBP12.29□□□□□ -0.44
SPIDR-204ENST00000517824 FBXO2Q9UK22 296 aaPredicted RBP12.29□□□□□ -0.44
SPIDR-204ENST00000517824 PCDHB6Q9Y5E3 794 aa12.29□□□□□ -0.44
SPIDR-204ENST00000517824 MYO3BQ8WXR4 1341 aa12.29□□□□□ -0.44
SPIDR-204ENST00000517824 PLIN4Q96Q06 1357 aa12.29□□□□□ -0.44
SPIDR-204ENST00000517824 SIPA1L1O43166 1804 aa12.28□□□□□ -0.44
SPIDR-204ENST00000517824 GLTPD2A6NH11 291 aa12.28□□□□□ -0.44
SPIDR-204ENST00000517824 ZNF500O60304 480 aaPredicted RBP12.28□□□□□ -0.44
SPIDR-204ENST00000517824 PTPREP23469 700 aa12.28□□□□□ -0.44
SPIDR-204ENST00000517824 SCNN1DP51172 638 aa12.28□□□□□ -0.44
SPIDR-204ENST00000517824 NAPAP54920 295 aa12.28□□□□□ -0.44
SPIDR-204ENST00000517824 EVX2Q03828 476 aa12.28□□□□□ -0.44
SPIDR-204ENST00000517824 FUT2Q10981 343 aa12.28□□□□□ -0.44
SPIDR-204ENST00000517824 CC2D2BQ6DHV5 1058 aa12.28□□□□□ -0.44
SPIDR-204ENST00000517824 RCSD1Q6JBY9 416 aa12.28□□□□□ -0.44
SPIDR-204ENST00000517824 PIK3AP1Q6ZUJ8 805 aa12.28□□□□□ -0.44
SPIDR-204ENST00000517824 PODNQ7Z5L7 613 aa12.28□□□□□ -0.44
SPIDR-204ENST00000517824 BLIDQ8IZY5 108 aa12.28□□□□□ -0.44
SPIDR-204ENST00000517824 SMC1BQ8NDV3 1235 aa12.28□□□□□ -0.44
SPIDR-204ENST00000517824 RASSF8Q8NHQ8 419 aa12.28□□□□□ -0.44
SPIDR-204ENST00000517824 SMARCE1Q969G3 411 aa12.28□□□□□ -0.44
SPIDR-204ENST00000517824 TMEM47Q9BQJ4 181 aa12.28□□□□□ -0.44
SPIDR-204ENST00000517824 BPIFA3Q9BQP9 254 aa12.28□□□□□ -0.44
SPIDR-204ENST00000517824 PCDHA4Q9UN74 947 aa12.28□□□□□ -0.44
SPIDR-204ENST00000517824 HPSEQ9Y251 543 aa12.28□□□□□ -0.44
SPIDR-204ENST00000517824 SRPRBQ9Y5M8 271 aaKnown RBP12.28□□□□□ -0.44
SPIDR-204ENST00000517824 FAM237AA0A1B0GTK4 181 aa12.27□□□□□ -0.45
SPIDR-204ENST00000517824 MPHOSPH10O00566 681 aaKnown RBP12.27□□□□□ -0.45
SPIDR-204ENST00000517824 CBFA2T2O43439 604 aa12.27□□□□□ -0.45
SPIDR-204ENST00000517824 TOB1P50616 345 aaPredicted RBP12.27□□□□□ -0.45
SPIDR-204ENST00000517824 PLCD1P51178 756 aa12.27□□□□□ -0.45
SPIDR-204ENST00000517824 RHBDL3P58872 404 aa12.27□□□□□ -0.45
SPIDR-204ENST00000517824 ASPRV1Q53RT3 343 aa12.27□□□□□ -0.45
SPIDR-204ENST00000517824 SARM1Q6SZW1 724 aa12.27□□□□□ -0.45
SPIDR-204ENST00000517824 HHIPL2Q6UWX4 724 aa12.27□□□□□ -0.45
SPIDR-204ENST00000517824 GPKOWQ92917 476 aaPredicted RBP eCLIP12.27□□□□□ -0.45
SPIDR-204ENST00000517824 SPZ1Q9BXG8 430 aa12.27□□□□□ -0.45
SPIDR-204ENST00000517824 DBNDD1Q9H9R9 158 aa12.27□□□□□ -0.45
SPIDR-204ENST00000517824 C6orf50Q9HD87 102 aa12.27□□□□□ -0.45
SPIDR-204ENST00000517824 IL17RBQ9NRM6 502 aa12.27□□□□□ -0.45
SPIDR-204ENST00000517824 TMOD2Q9NZR1 351 aa12.27□□□□□ -0.45
SPIDR-204ENST00000517824 SERPINB13Q9UIV8 391 aa12.27□□□□□ -0.45
SPIDR-204ENST00000517824 MORC2Q9Y6X9 1032 aaPredicted RBP12.27□□□□□ -0.45
SPIDR-204ENST00000517824 ATAD5Q96QE3 1844 aa12.26□□□□□ -0.45
SPIDR-204ENST00000517824 POTECB2RU33 542 aa12.26□□□□□ -0.45
SPIDR-204ENST00000517824 KLRF2D3W0D1 207 aa12.26□□□□□ -0.45
SPIDR-204ENST00000517824 hCG_1984214I3L0E3 225 aa12.26□□□□□ -0.45
SPIDR-204ENST00000517824 POLR2DO15514 142 aaKnown RBP12.26□□□□□ -0.45
SPIDR-204ENST00000517824 ECE2O60344 883 aa12.26□□□□□ -0.45
SPIDR-204ENST00000517824 GNA11P29992 359 aa12.26□□□□□ -0.45
SPIDR-204ENST00000517824 CRKP46108 304 aa12.26□□□□□ -0.45
SPIDR-204ENST00000517824 FKBP1AP62942 108 aaKnown RBP12.26□□□□□ -0.45
SPIDR-204ENST00000517824 PNOCQ13519 176 aa12.26□□□□□ -0.45
SPIDR-204ENST00000517824 POSTNQ15063 836 aa12.26□□□□□ -0.45
SPIDR-204ENST00000517824 ZNF174Q15697 407 aa12.26□□□□□ -0.45
SPIDR-204ENST00000517824 CCDC96Q2M329 555 aa12.26□□□□□ -0.45
SPIDR-204ENST00000517824 DPCR1Q3MIW9 517 aa12.26□□□□□ -0.45
SPIDR-204ENST00000517824 COL13A1Q5TAT6 717 aaPredicted RBP12.26□□□□□ -0.45
SPIDR-204ENST00000517824 KRT25Q7Z3Z0 450 aa12.26□□□□□ -0.45
SPIDR-204ENST00000517824 PLA2G4DQ86XP0 818 aa12.26□□□□□ -0.45
SPIDR-204ENST00000517824 ZSCAN29Q8IWY8 852 aaPredicted RBP12.26□□□□□ -0.45
SPIDR-204ENST00000517824 ZNF713Q8N859 430 aaPredicted RBP12.26□□□□□ -0.45
SPIDR-204ENST00000517824 ERCC4Q92889 916 aaPredicted RBP12.26□□□□□ -0.45
SPIDR-204ENST00000517824 MRFAP1L1Q96HT8 127 aa12.26□□□□□ -0.45
SPIDR-204ENST00000517824 OSBPL5Q9H0X9 879 aaPredicted RBP12.26□□□□□ -0.45
SPIDR-204ENST00000517824 MYH7BA7E2Y1 1941 aa12.26□□□□□ -0.45
SPIDR-204ENST00000517824 MYO1BO43795 1136 aa12.25□□□□□ -0.45
SPIDR-204ENST00000517824 NEMFO60524 1076 aa12.25□□□□□ -0.45
SPIDR-204ENST00000517824 VEGFAP15692 232 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms