RNA–Protein interactions for RNA: ENST00000517693.5

SPIDR-203, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 1,848 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-203ENST00000517693 UBE2Q2LH0YL09 131 aa13.52□□□□□ -0.25
SPIDR-203ENST00000517693 NR5A1Q13285 461 aa13.52□□□□□ -0.25
SPIDR-203ENST00000517693 TNFAIP1Q13829 316 aa13.52□□□□□ -0.25
SPIDR-203ENST00000517693 ZRSR1Q15695 479 aaKnown RBP13.52□□□□□ -0.25
SPIDR-203ENST00000517693 PPP1R18Q6NYC8 613 aa13.52□□□□□ -0.25
SPIDR-203ENST00000517693 BLIDQ8IZY5 108 aa13.52□□□□□ -0.25
SPIDR-203ENST00000517693 ZNF579Q8NAF0 562 aaKnown RBP13.52□□□□□ -0.25
SPIDR-203ENST00000517693 DCAF4Q8WV16 495 aa13.52□□□□□ -0.25
SPIDR-203ENST00000517693 PRMT6Q96LA8 375 aaPredicted RBP13.52□□□□□ -0.25
SPIDR-203ENST00000517693 TIGD1Q96MW7 591 aa13.52□□□□□ -0.25
SPIDR-203ENST00000517693 FAM13BQ9NYF5 915 aa13.52□□□□□ -0.25
SPIDR-203ENST00000517693 CLIP2Q9UDT6 1046 aa13.52□□□□□ -0.25
SPIDR-203ENST00000517693 BCS1LQ9Y276 419 aa13.52□□□□□ -0.25
SPIDR-203ENST00000517693 EIF6P56537 245 aaKnown RBP13.51□□□□□ -0.25
SPIDR-203ENST00000517693 RBM26Q5T8P6 1007 aaKnown RBP13.51□□□□□ -0.25
SPIDR-203ENST00000517693 HEATR3Q7Z4Q2 680 aa13.51□□□□□ -0.25
SPIDR-203ENST00000517693 ENGASEQ8NFI3 743 aa13.51□□□□□ -0.25
SPIDR-203ENST00000517693 MKL1Q969V6 931 aa13.51□□□□□ -0.25
SPIDR-203ENST00000517693 FERMT2Q96AC1 680 aa13.51□□□□□ -0.25
SPIDR-203ENST00000517693 RBSNQ9H1K0 784 aa13.51□□□□□ -0.25
SPIDR-203ENST00000517693 RIOX1Q9H6W3 641 aa13.51□□□□□ -0.25
SPIDR-203ENST00000517693 C6orf50Q9HD87 102 aa13.51□□□□□ -0.25
SPIDR-203ENST00000517693 ZNF70Q9UC06 446 aaPredicted RBP13.51□□□□□ -0.25
SPIDR-203ENST00000517693 MTMR7Q9Y216 660 aa13.51□□□□□ -0.25
SPIDR-203ENST00000517693 SIPA1L1O43166 1804 aa13.51□□□□□ -0.25
SPIDR-203ENST00000517693 ARFGEF1Q9Y6D6 1849 aa13.51□□□□□ -0.25
SPIDR-203ENST00000517693 FAM237AA0A1B0GTK4 181 aa13.5□□□□□ -0.25
SPIDR-203ENST00000517693 ESYT2A0FGR8 921 aa13.5□□□□□ -0.25
SPIDR-203ENST00000517693 CACNB3P54284 484 aa13.5□□□□□ -0.25
SPIDR-203ENST00000517693 ICA1Q05084 483 aa13.5□□□□□ -0.25
SPIDR-203ENST00000517693 CXCL9Q07325 125 aa13.5□□□□□ -0.25
SPIDR-203ENST00000517693 ABCB5Q2M3G0 1257 aa13.5□□□□□ -0.25
SPIDR-203ENST00000517693 FMR1NBQ8N0W7 255 aaPredicted RBP13.5□□□□□ -0.25
SPIDR-203ENST00000517693 COL4A5P29400 1685 aa13.5□□□□□ -0.25
SPIDR-203ENST00000517693 CCDC194A0A1B0GVG4 234 aa13.5□□□□□ -0.25
SPIDR-203ENST00000517693 hCG_1642624A0A1W2PR95 340 aa13.5□□□□□ -0.25
SPIDR-203ENST00000517693 PSDA5PKW4 1024 aaPredicted RBP13.5□□□□□ -0.25
SPIDR-203ENST00000517693 NAPAP54920 295 aa13.5□□□□□ -0.25
SPIDR-203ENST00000517693 ZNF543Q08ER8 600 aa13.5□□□□□ -0.25
SPIDR-203ENST00000517693 SNW1Q13573 536 aaKnown RBP13.5□□□□□ -0.25
SPIDR-203ENST00000517693 AXDND1Q5T1B0 1012 aaPredicted RBP13.5□□□□□ -0.25
SPIDR-203ENST00000517693 RESP18Q5W5W9 173 aa13.5□□□□□ -0.25
SPIDR-203ENST00000517693 USP17L2Q6R6M4 530 aa13.5□□□□□ -0.25
SPIDR-203ENST00000517693 LRRC47Q8N1G4 583 aaKnown RBP13.5□□□□□ -0.25
SPIDR-203ENST00000517693 OXER1Q8TDS5 423 aa13.5□□□□□ -0.25
SPIDR-203ENST00000517693 TNFRSF25Q93038 417 aa13.5□□□□□ -0.25
SPIDR-203ENST00000517693 SDF4Q9BRK5 362 aa13.5□□□□□ -0.25
SPIDR-203ENST00000517693 PYM1Q9BRP8 204 aaKnown RBP13.5□□□□□ -0.25
SPIDR-203ENST00000517693 FUCA2Q9BTY2 467 aa13.5□□□□□ -0.25
SPIDR-203ENST00000517693 GLT8D2Q9H1C3 349 aa13.5□□□□□ -0.25
SPIDR-203ENST00000517693 GOLPH3LQ9H4A5 285 aa13.5□□□□□ -0.25
SPIDR-203ENST00000517693 DNAJC18Q9H819 358 aa13.5□□□□□ -0.25
SPIDR-203ENST00000517693 MYH4Q9Y623 1939 aa13.49□□□□□ -0.25
SPIDR-203ENST00000517693 USP17L5A8MUK1 530 aa13.49□□□□□ -0.25
SPIDR-203ENST00000517693 STXBP3O00186 592 aa13.49□□□□□ -0.25
SPIDR-203ENST00000517693 NFKBIEO00221 500 aa13.49□□□□□ -0.25
SPIDR-203ENST00000517693 TBC1D12O60347 775 aa13.49□□□□□ -0.25
SPIDR-203ENST00000517693 PTPREP23469 700 aa13.49□□□□□ -0.25
SPIDR-203ENST00000517693 MARCKSP29966 332 aaPredicted RBP13.49□□□□□ -0.25
SPIDR-203ENST00000517693 SYKP43405 635 aa13.49□□□□□ -0.25
SPIDR-203ENST00000517693 ATP2B2Q01814 1243 aa13.49□□□□□ -0.25
SPIDR-203ENST00000517693 TYRO3Q06418 890 aa13.49□□□□□ -0.25
SPIDR-203ENST00000517693 ORC2Q13416 577 aaPredicted RBP13.49□□□□□ -0.25
SPIDR-203ENST00000517693 CAMK4Q16566 473 aa13.49□□□□□ -0.25
SPIDR-203ENST00000517693 CCDC96Q2M329 555 aa13.49□□□□□ -0.25
SPIDR-203ENST00000517693 TTC38Q5R3I4 469 aa13.49□□□□□ -0.25
SPIDR-203ENST00000517693 WWC2Q6AWC2 1192 aa13.49□□□□□ -0.25
SPIDR-203ENST00000517693 SH3BP5LQ7L8J4 393 aa13.49□□□□□ -0.25
SPIDR-203ENST00000517693 KRT25Q7Z3Z0 450 aa13.49□□□□□ -0.25
SPIDR-203ENST00000517693 ZFPM1Q8IX07 1006 aa13.49□□□□□ -0.25
SPIDR-203ENST00000517693 DPF2Q92785 391 aa13.49□□□□□ -0.25
SPIDR-203ENST00000517693 ZMYND12Q9H0C1 365 aa13.49□□□□□ -0.25
SPIDR-203ENST00000517693 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.49□□□□□ -0.25
SPIDR-203ENST00000517693 PCDHAC2Q9Y5I4 1007 aa13.49□□□□□ -0.25
SPIDR-203ENST00000517693 SRPRBQ9Y5M8 271 aaKnown RBP13.49□□□□□ -0.25
SPIDR-203ENST00000517693 TCP10L2B9ZVM9 353 aa13.48□□□□□ -0.25
SPIDR-203ENST00000517693 CYTH3O43739 400 aa13.48□□□□□ -0.25
SPIDR-203ENST00000517693 PFKFB1P16118 471 aa13.48□□□□□ -0.25
SPIDR-203ENST00000517693 TOB1P50616 345 aaPredicted RBP13.48□□□□□ -0.25
SPIDR-203ENST00000517693 NDUFA8P51970 172 aa13.48□□□□□ -0.25
SPIDR-203ENST00000517693 STX1AQ16623 288 aa13.48□□□□□ -0.25
SPIDR-203ENST00000517693 ELOA2Q8IYF1 753 aaPredicted RBP13.48□□□□□ -0.25
SPIDR-203ENST00000517693 GMCL1P1Q8NEA9 526 aa13.48□□□□□ -0.25
SPIDR-203ENST00000517693 FAM200AQ8TCP9 573 aa13.48□□□□□ -0.25
SPIDR-203ENST00000517693 PIBF1Q8WXW3 757 aa13.48□□□□□ -0.25
SPIDR-203ENST00000517693 SH2D4AQ9H788 454 aa13.48□□□□□ -0.25
SPIDR-203ENST00000517693 VEZTQ9HBM0 779 aa13.48□□□□□ -0.25
SPIDR-203ENST00000517693 ARHGEF10LQ9HCE6 1279 aa13.48□□□□□ -0.25
SPIDR-203ENST00000517693 MYOZ2Q9NPC6 264 aa13.48□□□□□ -0.25
SPIDR-203ENST00000517693 ZBTB12Q9Y330 459 aaPredicted RBP13.48□□□□□ -0.25
SPIDR-203ENST00000517693 A0A1B0GVL5 298 aa13.48□□□□□ -0.25
SPIDR-203ENST00000517693 ZNF202O95125 648 aa13.48□□□□□ -0.25
SPIDR-203ENST00000517693 GOLGA8HP0CJ92 632 aa13.48□□□□□ -0.25
SPIDR-203ENST00000517693 PTGER2P43116 358 aa13.48□□□□□ -0.25
SPIDR-203ENST00000517693 ZNF280AP59817 542 aaPredicted RBP13.48□□□□□ -0.25
SPIDR-203ENST00000517693 TRAF1Q13077 416 aa13.48□□□□□ -0.25
SPIDR-203ENST00000517693 NPY5RQ15761 445 aa13.48□□□□□ -0.25
SPIDR-203ENST00000517693 KANK3Q6NY19 840 aa13.48□□□□□ -0.25
SPIDR-203ENST00000517693 TRIM44Q96DX7 344 aaPredicted RBP13.48□□□□□ -0.25
SPIDR-203ENST00000517693 ZBED3Q96IU2 234 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms