RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 NOB1Q9ULX3 412 aaKnown RBP3.42□□□□□ -1.86
SKP1-204ENST00000517691 POLIQ9UNA4 740 aa3.42□□□□□ -1.86
SKP1-204ENST00000517691 UBR2Q8IWV8 1755 aa3.41□□□□□ -1.86
SKP1-204ENST00000517691 KRTAP9-7A8MTY7 169 aa3.41□□□□□ -1.86
SKP1-204ENST00000517691 BCAR3O75815 825 aa3.41□□□□□ -1.86
SKP1-204ENST00000517691 LDHBP07195 334 aaKnown RBP3.41□□□□□ -1.86
SKP1-204ENST00000517691 CT47B1P0C2W7 299 aaPredicted RBP3.41□□□□□ -1.86
SKP1-204ENST00000517691 H2AFB1P0C5Y9 115 aa3.41□□□□□ -1.86
SKP1-204ENST00000517691 H2AFB2P0C5Z0 115 aa3.41□□□□□ -1.86
SKP1-204ENST00000517691 HCLS1P14317 486 aaPredicted RBP3.41□□□□□ -1.86
SKP1-204ENST00000517691 PTMSP20962 102 aa3.41□□□□□ -1.86
SKP1-204ENST00000517691 HSD3B2P26439 372 aa3.41□□□□□ -1.86
SKP1-204ENST00000517691 MAPK8P45983 427 aa3.41□□□□□ -1.86
SKP1-204ENST00000517691 RARSP54136 660 aaKnown RBP3.41□□□□□ -1.86
SKP1-204ENST00000517691 DGKZQ13574 1117 aa3.41□□□□□ -1.86
SKP1-204ENST00000517691 RTN1Q16799 776 aa3.41□□□□□ -1.86
SKP1-204ENST00000517691 CWF19L2Q2TBE0 894 aaKnown RBP3.41□□□□□ -1.86
SKP1-204ENST00000517691 ALDH1L2Q3SY69 923 aa3.41□□□□□ -1.86
SKP1-204ENST00000517691 LONRF3Q496Y0 759 aa3.41□□□□□ -1.86
SKP1-204ENST00000517691 RNF187Q5TA31 235 aaPredicted RBP3.41□□□□□ -1.86
SKP1-204ENST00000517691 TSHZ1Q6ZSZ6 1077 aa3.41□□□□□ -1.86
SKP1-204ENST00000517691 FAM43BQ6ZT52 329 aaPredicted RBP3.41□□□□□ -1.86
SKP1-204ENST00000517691 SYNE4Q8N205 404 aa3.41□□□□□ -1.86
SKP1-204ENST00000517691 DNAAF4Q8WXU2 420 aa3.41□□□□□ -1.86
SKP1-204ENST00000517691 ALKBH8Q96BT7 664 aaKnown RBP3.41□□□□□ -1.86
SKP1-204ENST00000517691 KLRG1Q96E93 195 aa3.41□□□□□ -1.86
SKP1-204ENST00000517691 IFT43Q96FT9 208 aa3.41□□□□□ -1.86
SKP1-204ENST00000517691 DMRTB1Q96MA1 342 aa3.41□□□□□ -1.86
SKP1-204ENST00000517691 NLRP3Q96P20 1036 aa3.41□□□□□ -1.86
SKP1-204ENST00000517691 GMLQ99445 158 aa3.41□□□□□ -1.86
SKP1-204ENST00000517691 BRINP2Q9C0B6 783 aa3.41□□□□□ -1.86
SKP1-204ENST00000517691 PHACTR1Q9C0D0 580 aa3.41□□□□□ -1.86
SKP1-204ENST00000517691 NIF3L1Q9GZT8 377 aa3.41□□□□□ -1.86
SKP1-204ENST00000517691 MAF1Q9H063 256 aa3.41□□□□□ -1.86
SKP1-204ENST00000517691 SUV39H2Q9H5I1 410 aa3.41□□□□□ -1.86
SKP1-204ENST00000517691 RRAGCQ9HB90 399 aa3.41□□□□□ -1.86
SKP1-204ENST00000517691 CWC25Q9NXE8 425 aaPredicted RBP3.41□□□□□ -1.86
SKP1-204ENST00000517691 DDX56Q9NY93 547 aaKnown RBP3.41□□□□□ -1.86
SKP1-204ENST00000517691 PIM2Q9P1W9 311 aa3.41□□□□□ -1.86
SKP1-204ENST00000517691 BCS1LQ9Y276 419 aa3.41□□□□□ -1.86
SKP1-204ENST00000517691 RPS6KL1Q9Y6S9 549 aa3.41□□□□□ -1.86
SKP1-204ENST00000517691 ZNF831Q5JPB2 1677 aa3.41□□□□□ -1.86
SKP1-204ENST00000517691 UBN2Q6ZU65 1347 aa3.41□□□□□ -1.86
SKP1-204ENST00000517691 KDM3BQ7LBC6 1761 aa3.41□□□□□ -1.86
SKP1-204ENST00000517691 TAF1LQ8IZX4 1826 aa3.41□□□□□ -1.86
SKP1-204ENST00000517691 COL5A3P25940 1745 aaPredicted RBP3.41□□□□□ -1.86
SKP1-204ENST00000517691 MEN1O00255 615 aa3.41□□□□□ -1.86
SKP1-204ENST00000517691 IRS4O14654 1257 aaPredicted RBP3.41□□□□□ -1.86
SKP1-204ENST00000517691 IPO8O15397 1037 aaKnown RBP3.41□□□□□ -1.86
SKP1-204ENST00000517691 PRPF40AO75400 957 aaKnown RBP3.41□□□□□ -1.86
SKP1-204ENST00000517691 EIF3JO75822 258 aaKnown RBP3.41□□□□□ -1.86
SKP1-204ENST00000517691 NTSR2O95665 410 aa3.41□□□□□ -1.86
SKP1-204ENST00000517691 TXLNAP40222 546 aa3.41□□□□□ -1.86
SKP1-204ENST00000517691 TBX4P57082 545 aa3.41□□□□□ -1.86
SKP1-204ENST00000517691 DALRD3Q5D0E6 543 aaKnown RBP3.41□□□□□ -1.86
SKP1-204ENST00000517691 ARHGAP27Q6ZUM4 889 aa3.41□□□□□ -1.86
SKP1-204ENST00000517691 C11orf96Q7Z7L8 435 aa3.41□□□□□ -1.86
SKP1-204ENST00000517691 CCDC191Q8NCU4 936 aa3.41□□□□□ -1.86
SKP1-204ENST00000517691 EDEM1Q92611 657 aa3.41□□□□□ -1.86
SKP1-204ENST00000517691 RPGRQ92834 1020 aaKnown RBP3.41□□□□□ -1.86
SKP1-204ENST00000517691 RNF34Q969K3 372 aa3.41□□□□□ -1.86
SKP1-204ENST00000517691 ARMC5Q96C12 935 aa3.41□□□□□ -1.86
SKP1-204ENST00000517691 RPS6KC1Q96S38 1066 aa3.41□□□□□ -1.86
SKP1-204ENST00000517691 DUSP9Q99956 384 aaKnown RBP3.41□□□□□ -1.86
SKP1-204ENST00000517691 ISCA1Q9BUE6 129 aa3.41□□□□□ -1.86
SKP1-204ENST00000517691 CFHR5Q9BXR6 569 aa3.41□□□□□ -1.86
SKP1-204ENST00000517691 C9orf78Q9NZ63 289 aaPredicted RBP3.41□□□□□ -1.86
SKP1-204ENST00000517691 ZNF232Q9UNY5 417 aa3.41□□□□□ -1.86
SKP1-204ENST00000517691 CASZ1Q86V15 1759 aa3.41□□□□□ -1.86
SKP1-204ENST00000517691 SH3TC1Q8TE82 1336 aa3.4□□□□□ -1.86
SKP1-204ENST00000517691 ADCY9O60503 1353 aa3.4□□□□□ -1.86
SKP1-204ENST00000517691 CICQ96RK0 1608 aaPredicted RBP3.4□□□□□ -1.86
SKP1-204ENST00000517691 MYH14Q7Z406 1995 aaKnown RBP3.4□□□□□ -1.86
SKP1-204ENST00000517691 NEURL1BA8MQ27 555 aa3.4□□□□□ -1.87
SKP1-204ENST00000517691 GRIN3BO60391 1043 aa3.4□□□□□ -1.87
SKP1-204ENST00000517691 PDGFAP04085 211 aa3.4□□□□□ -1.87
SKP1-204ENST00000517691 S100BP04271 92 aaPredicted RBP3.4□□□□□ -1.87
SKP1-204ENST00000517691 IGKV5-2P06315 115 aa3.4□□□□□ -1.87
SKP1-204ENST00000517691 SRGNP10124 158 aa3.4□□□□□ -1.87
SKP1-204ENST00000517691 NPR1P16066 1061 aa3.4□□□□□ -1.87
SKP1-204ENST00000517691 KCNA3P22001 575 aa3.4□□□□□ -1.87
SKP1-204ENST00000517691 MZF1P28698 734 aaPredicted RBP3.4□□□□□ -1.87
SKP1-204ENST00000517691 ZAP70P43403 619 aa3.4□□□□□ -1.87
SKP1-204ENST00000517691 DAB2P98082 770 aa3.4□□□□□ -1.87
SKP1-204ENST00000517691 DNM1Q05193 864 aaKnown RBP3.4□□□□□ -1.87
SKP1-204ENST00000517691 TRIM28Q13263 835 aaKnown RBP3.4□□□□□ -1.87
SKP1-204ENST00000517691 BIRC2Q13490 618 aa3.4□□□□□ -1.87
SKP1-204ENST00000517691 GCKRQ14397 625 aa3.4□□□□□ -1.87
SKP1-204ENST00000517691 ENOX2Q16206 610 aaKnown RBP3.4□□□□□ -1.87
SKP1-204ENST00000517691 C1orf53Q5VUE5 145 aa3.4□□□□□ -1.87
SKP1-204ENST00000517691 DDX46Q7L014 1031 aaKnown RBP3.4□□□□□ -1.87
SKP1-204ENST00000517691 TMC4Q7Z404 712 aa3.4□□□□□ -1.87
SKP1-204ENST00000517691 TTLL6Q8N841 843 aa3.4□□□□□ -1.87
SKP1-204ENST00000517691 ZBTB38Q8NAP3 1195 aaPredicted RBP3.4□□□□□ -1.87
SKP1-204ENST00000517691 LINS1Q8NG48 757 aa3.4□□□□□ -1.87
SKP1-204ENST00000517691 MASTLQ96GX5 879 aa3.4□□□□□ -1.87
SKP1-204ENST00000517691 RBM17Q96I25 401 aaKnown RBP3.4□□□□□ -1.87
SKP1-204ENST00000517691 ZSCAN10Q96SZ4 725 aaPredicted RBP3.4□□□□□ -1.87
SKP1-204ENST00000517691 API5Q9BZZ5 524 aaKnown RBP3.4□□□□□ -1.87
SKP1-204ENST00000517691 GRIP2Q9C0E4 1043 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms