RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 CPVLQ9H3G5 476 aa11.58□□□□□ -0.56
CLN8-202ENST00000517514 RPAP3Q9H6T3 665 aaPredicted RBP11.58□□□□□ -0.56
CLN8-202ENST00000517514 FBXO28Q9NVF7 368 aa11.58□□□□□ -0.56
CLN8-202ENST00000517514 MAD2L2Q9UI95 211 aa11.58□□□□□ -0.56
CLN8-202ENST00000517514 AGTPBP1Q9UPW5 1226 aa11.58□□□□□ -0.56
CLN8-202ENST00000517514 MTMR7Q9Y216 660 aa11.58□□□□□ -0.56
CLN8-202ENST00000517514 ERICH2A1L162 156 aa11.57□□□□□ -0.56
CLN8-202ENST00000517514 PALM3A6NDB9 673 aaPredicted RBP11.57□□□□□ -0.56
CLN8-202ENST00000517514 MANSC4A6NHS7 340 aaPredicted RBP11.57□□□□□ -0.56
CLN8-202ENST00000517514 WDR46O15213 610 aaKnown RBP11.57□□□□□ -0.56
CLN8-202ENST00000517514 GOLGA8HP0CJ92 632 aa11.57□□□□□ -0.56
CLN8-202ENST00000517514 PDIA3P30101 505 aaKnown RBP11.57□□□□□ -0.56
CLN8-202ENST00000517514 HOXA7P31268 230 aaPredicted RBP11.57□□□□□ -0.56
CLN8-202ENST00000517514 ZNF543Q08ER8 600 aa11.57□□□□□ -0.56
CLN8-202ENST00000517514 NOGQ13253 232 aa11.57□□□□□ -0.56
CLN8-202ENST00000517514 CATSPERGQ6ZRH7 1159 aa11.57□□□□□ -0.56
CLN8-202ENST00000517514 PAXIP1Q6ZW49 1069 aaPredicted RBP11.57□□□□□ -0.56
CLN8-202ENST00000517514 KCTD1Q719H9 257 aa11.57□□□□□ -0.56
CLN8-202ENST00000517514 ANKRD23Q86SG2 305 aa11.57□□□□□ -0.56
CLN8-202ENST00000517514 NBPF11Q86T75 865 aa11.57□□□□□ -0.56
CLN8-202ENST00000517514 TMTC2Q8N394 836 aa11.57□□□□□ -0.56
CLN8-202ENST00000517514 DCAF4Q8WV16 495 aa11.57□□□□□ -0.56
CLN8-202ENST00000517514 LPAR1Q92633 364 aa11.57□□□□□ -0.56
CLN8-202ENST00000517514 SH2D4AQ9H788 454 aa11.57□□□□□ -0.56
CLN8-202ENST00000517514 GOPCQ9HD26 462 aa11.57□□□□□ -0.56
CLN8-202ENST00000517514 FRMPD2Q68DX3 1309 aaPredicted RBP11.57□□□□□ -0.56
CLN8-202ENST00000517514 MYH6P13533 1939 aa11.56□□□□□ -0.56
CLN8-202ENST00000517514 CCDC69A6NI79 296 aa11.56□□□□□ -0.56
CLN8-202ENST00000517514 DDAH1O94760 285 aa11.56□□□□□ -0.56
CLN8-202ENST00000517514 BMP3P12645 472 aa11.56□□□□□ -0.56
CLN8-202ENST00000517514 CDC27P30260 824 aa11.56□□□□□ -0.56
CLN8-202ENST00000517514 FUT2Q10981 343 aa11.56□□□□□ -0.56
CLN8-202ENST00000517514 ME3Q16798 604 aa11.56□□□□□ -0.56
CLN8-202ENST00000517514 BTNL9Q6UXG8 535 aa11.56□□□□□ -0.56
CLN8-202ENST00000517514 NFXL1Q6ZNB6 911 aa11.56□□□□□ -0.56
CLN8-202ENST00000517514 FASTKD5Q7L8L6 764 aaKnown RBP11.56□□□□□ -0.56
CLN8-202ENST00000517514 IFNL1Q8IU54 200 aa11.56□□□□□ -0.56
CLN8-202ENST00000517514 ZNF274Q96GC6 653 aaPredicted RBP11.56□□□□□ -0.56
CLN8-202ENST00000517514 MAP3K14Q99558 947 aa11.56□□□□□ -0.56
CLN8-202ENST00000517514 GPCPD1Q9NPB8 672 aa11.56□□□□□ -0.56
CLN8-202ENST00000517514 TMOD4Q9NZQ9 345 aa11.56□□□□□ -0.56
CLN8-202ENST00000517514 ADGRA2Q96PE1 1338 aa11.56□□□□□ -0.56
CLN8-202ENST00000517514 SPDYE16A6NNV3 312 aaPredicted RBP11.55□□□□□ -0.56
CLN8-202ENST00000517514 PDHXO00330 501 aa11.55□□□□□ -0.56
CLN8-202ENST00000517514 ZBTB43O43298 467 aa11.55□□□□□ -0.56
CLN8-202ENST00000517514 CYTH3O43739 400 aa11.55□□□□□ -0.56
CLN8-202ENST00000517514 RAD21O60216 631 aa11.55□□□□□ -0.56
CLN8-202ENST00000517514 PEX10O60683 326 aa11.55□□□□□ -0.56
CLN8-202ENST00000517514 PLA2G6O60733 806 aa11.55□□□□□ -0.56
CLN8-202ENST00000517514 DTNBO60941 627 aa11.55□□□□□ -0.56
CLN8-202ENST00000517514 PLEKHA8P1O95397 391 aa11.55□□□□□ -0.56
CLN8-202ENST00000517514 SLC16A2P36021 539 aa11.55□□□□□ -0.56
CLN8-202ENST00000517514 MAP2K2P36507 400 aa11.55□□□□□ -0.56
CLN8-202ENST00000517514 SLC1A4P43007 532 aa11.55□□□□□ -0.56
CLN8-202ENST00000517514 NTRK3Q16288 839 aa11.55□□□□□ -0.56
CLN8-202ENST00000517514 NOL8Q76FK4 1167 aaKnown RBP11.55□□□□□ -0.56
CLN8-202ENST00000517514 CATIPQ7Z7H3 387 aa11.55□□□□□ -0.56
CLN8-202ENST00000517514 MICU3Q86XE3 530 aa11.55□□□□□ -0.56
CLN8-202ENST00000517514 CCDC144CPQ8IYA2 1237 aa11.55□□□□□ -0.56
CLN8-202ENST00000517514 FANCBQ8NB91 859 aa11.55□□□□□ -0.56
CLN8-202ENST00000517514 REPS2Q8NFH8 660 aa11.55□□□□□ -0.56
CLN8-202ENST00000517514 NUP133Q8WUM0 1156 aa11.55□□□□□ -0.56
CLN8-202ENST00000517514 P2RX7Q99572 595 aaKnown RBP11.55□□□□□ -0.56
CLN8-202ENST00000517514 UBA5Q9GZZ9 404 aa11.55□□□□□ -0.56
CLN8-202ENST00000517514 ASCC2Q9H1I8 757 aaPredicted RBP11.55□□□□□ -0.56
CLN8-202ENST00000517514 R3HDMLQ9H3Y0 253 aa11.55□□□□□ -0.56
CLN8-202ENST00000517514 NCOA5Q9HCD5 579 aaKnown RBP11.55□□□□□ -0.56
CLN8-202ENST00000517514 ADAMTS5Q9UNA0 930 aa11.55□□□□□ -0.56
CLN8-202ENST00000517514 SLC45A1Q9Y2W3 748 aa11.55□□□□□ -0.56
CLN8-202ENST00000517514 SLC12A7Q9Y666 1083 aa11.55□□□□□ -0.56
CLN8-202ENST00000517514 ZSWIM8A7E2V4 1837 aa11.55□□□□□ -0.56
CLN8-202ENST00000517514 GOLGA8BA8MQT2 603 aa11.54□□□□□ -0.56
CLN8-202ENST00000517514 USP17L15C9J2P7 530 aa11.54□□□□□ -0.56
CLN8-202ENST00000517514 USP17L13C9JLJ4 530 aa11.54□□□□□ -0.56
CLN8-202ENST00000517514 TMEM232C9JQI7 657 aa11.54□□□□□ -0.56
CLN8-202ENST00000517514 USP17L11C9JVI0 530 aa11.54□□□□□ -0.56
CLN8-202ENST00000517514 USP17L18D6R9N7 530 aa11.54□□□□□ -0.56
CLN8-202ENST00000517514 USP17L22D6RA61 530 aa11.54□□□□□ -0.56
CLN8-202ENST00000517514 USP17L17D6RBQ6 530 aa11.54□□□□□ -0.56
CLN8-202ENST00000517514 USP17L19D6RCP7 530 aa11.54□□□□□ -0.56
CLN8-202ENST00000517514 USP17L20D6RJB6 530 aa11.54□□□□□ -0.56
CLN8-202ENST00000517514 PFKFB2O60825 505 aa11.54□□□□□ -0.56
CLN8-202ENST00000517514 CNMDO75829 334 aa11.54□□□□□ -0.56
CLN8-202ENST00000517514 CTDNEP1O95476 244 aa11.54□□□□□ -0.56
CLN8-202ENST00000517514 CYP2C8P10632 490 aa11.54□□□□□ -0.56
CLN8-202ENST00000517514 DSG3P32926 999 aa11.54□□□□□ -0.56
CLN8-202ENST00000517514 ADD1P35611 737 aaKnown RBP11.54□□□□□ -0.56
CLN8-202ENST00000517514 RCAN1P53805 252 aa11.54□□□□□ -0.56
CLN8-202ENST00000517514 INHBEP58166 350 aa11.54□□□□□ -0.56
CLN8-202ENST00000517514 USP17L24Q0WX57 530 aa11.54□□□□□ -0.56
CLN8-202ENST00000517514 SCRN1Q12765 414 aa11.54□□□□□ -0.56
CLN8-202ENST00000517514 ASPRV1Q53RT3 343 aa11.54□□□□□ -0.56
CLN8-202ENST00000517514 CMTR1Q8N1G2 835 aaKnown RBP11.54□□□□□ -0.56
CLN8-202ENST00000517514 SRBD1Q8N5C6 995 aaKnown RBP11.54□□□□□ -0.56
CLN8-202ENST00000517514 NECAB1Q8N987 351 aa11.54□□□□□ -0.56
CLN8-202ENST00000517514 PPP1R9AQ9ULJ8 1098 aa11.54□□□□□ -0.56
CLN8-202ENST00000517514 GOLGA8AA7E2F4 631 aa11.53□□□□□ -0.56
CLN8-202ENST00000517514 KLRF2D3W0D1 207 aa11.53□□□□□ -0.56
CLN8-202ENST00000517514 PARP1P09874 1014 aaKnown RBP11.53□□□□□ -0.56
CLN8-202ENST00000517514 SNAP25P60880 206 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms