RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 TRIM56Q9BRZ2 755 aaKnown RBP12.16□□□□□ -0.46
TRIM41-209ENST00000515834 RTEL1Q9NZ71 1219 aa12.16□□□□□ -0.46
TRIM41-209ENST00000515834 USP17L12C9JPN9 530 aa12.16□□□□□ -0.46
TRIM41-209ENST00000515834 USP17L21D6R901 530 aa12.16□□□□□ -0.46
TRIM41-209ENST00000515834 DISC1Q9NRI5 854 aa12.16□□□□□ -0.46
TRIM41-209ENST00000515834 LAMC3Q9Y6N6 1575 aa12.16□□□□□ -0.46
TRIM41-209ENST00000515834 PLEKHG3A1L390 1219 aa12.16□□□□□ -0.46
TRIM41-209ENST00000515834 GSTA1P08263 222 aa12.16□□□□□ -0.46
TRIM41-209ENST00000515834 GSTA2P09210 222 aa12.16□□□□□ -0.46
TRIM41-209ENST00000515834 SH2D4BQ5SQS7 431 aa12.16□□□□□ -0.46
TRIM41-209ENST00000515834 RILPQ96NA2 401 aa12.16□□□□□ -0.46
TRIM41-209ENST00000515834 NUCKS1Q9H1E3 243 aaKnown RBP12.16□□□□□ -0.46
TRIM41-209ENST00000515834 ARPP21Q9UBL0 812 aaPredicted RBP12.16□□□□□ -0.46
TRIM41-209ENST00000515834 POLIQ9UNA4 740 aa12.16□□□□□ -0.46
TRIM41-209ENST00000515834 TMEM232C9JQI7 657 aa12.15□□□□□ -0.46
TRIM41-209ENST00000515834 ABCB4P21439 1286 aa12.15□□□□□ -0.46
TRIM41-209ENST00000515834 ARHGEF2Q92974 986 aaKnown RBP12.15□□□□□ -0.46
TRIM41-209ENST00000515834 LSM14BQ9BX40 385 aaKnown RBP12.15□□□□□ -0.46
TRIM41-209ENST00000515834 CCDC68Q9H2F9 335 aa12.15□□□□□ -0.46
TRIM41-209ENST00000515834 IFNB1P01574 187 aa12.15□□□□□ -0.46
TRIM41-209ENST00000515834 DMP1Q13316 513 aaPredicted RBP12.15□□□□□ -0.46
TRIM41-209ENST00000515834 USPL1Q5W0Q7 1092 aa12.15□□□□□ -0.46
TRIM41-209ENST00000515834 FAM76AQ8TAV0 307 aa12.15□□□□□ -0.46
TRIM41-209ENST00000515834 NLRC4Q9NPP4 1024 aa12.15□□□□□ -0.46
TRIM41-209ENST00000515834 PTPROQ16827 1216 aa12.15□□□□□ -0.46
TRIM41-209ENST00000515834 TEKT3Q9BXF9 490 aa12.15□□□□□ -0.46
TRIM41-209ENST00000515834 NRBP2Q9NSY0 501 aa12.15□□□□□ -0.46
TRIM41-209ENST00000515834 ZSCAN20P17040 1043 aaPredicted RBP12.15□□□□□ -0.46
TRIM41-209ENST00000515834 SFMBT2Q5VUG0 894 aa12.15□□□□□ -0.46
TRIM41-209ENST00000515834 RSRC2Q7L4I2 434 aaKnown RBP12.15□□□□□ -0.46
TRIM41-209ENST00000515834 EEPD1Q7L9B9 569 aa12.15□□□□□ -0.46
TRIM41-209ENST00000515834 PALM2Q8IXS6 379 aa12.15□□□□□ -0.46
TRIM41-209ENST00000515834 PPFIBP2Q8ND30 876 aa12.15□□□□□ -0.46
TRIM41-209ENST00000515834 RBSNQ9H1K0 784 aa12.15□□□□□ -0.46
TRIM41-209ENST00000515834 PIK3CAP42336 1068 aa12.15□□□□□ -0.46
TRIM41-209ENST00000515834 BCAMP50895 628 aa12.15□□□□□ -0.46
TRIM41-209ENST00000515834 LACTBP83111 547 aaPredicted RBP12.15□□□□□ -0.46
TRIM41-209ENST00000515834 ABCB5Q2M3G0 1257 aa12.15□□□□□ -0.46
TRIM41-209ENST00000515834 U2AF1L4Q8WU68 220 aaKnown RBP12.15□□□□□ -0.46
TRIM41-209ENST00000515834 DCTPP1Q9H773 170 aa12.15□□□□□ -0.46
TRIM41-209ENST00000515834 RBBP5Q15291 538 aaKnown RBP12.15□□□□□ -0.47
TRIM41-209ENST00000515834 PLA2G4DQ86XP0 818 aa12.15□□□□□ -0.47
TRIM41-209ENST00000515834 KSR1Q8IVT5 923 aa12.15□□□□□ -0.47
TRIM41-209ENST00000515834 PLEKHM2Q8IWE5 1019 aa12.15□□□□□ -0.47
TRIM41-209ENST00000515834 RAB3IPQ96QF0 476 aaPredicted RBP12.15□□□□□ -0.47
TRIM41-209ENST00000515834 RAB20Q9NX57 234 aa12.15□□□□□ -0.47
TRIM41-209ENST00000515834 ZHX1Q9UKY1 873 aaPredicted RBP12.15□□□□□ -0.47
TRIM41-209ENST00000515834 TRPC5Q9UL62 973 aaPredicted RBP12.15□□□□□ -0.47
TRIM41-209ENST00000515834 MAGED2Q9UNF1 606 aaPredicted RBP12.15□□□□□ -0.47
TRIM41-209ENST00000515834 DBNDD1Q9H9R9 158 aa12.14□□□□□ -0.47
TRIM41-209ENST00000515834 BNIP3LO60238 219 aa12.14□□□□□ -0.47
TRIM41-209ENST00000515834 CAPN12Q6ZSI9 719 aa12.14□□□□□ -0.47
TRIM41-209ENST00000515834 METTL23Q86XA0 190 aa12.14□□□□□ -0.47
TRIM41-209ENST00000515834 SECISBP2LQ93073 1101 aaKnown RBP12.14□□□□□ -0.47
TRIM41-209ENST00000515834 KCNG1Q9UIX4 513 aa12.14□□□□□ -0.47
TRIM41-209ENST00000515834 ZNF518AQ6AHZ1 1483 aa12.14□□□□□ -0.47
TRIM41-209ENST00000515834 ARHGEF10O15013 1369 aa12.14□□□□□ -0.47
TRIM41-209ENST00000515834 ARFGAP2Q8N6H7 521 aa12.14□□□□□ -0.47
TRIM41-209ENST00000515834 MGARPQ8TDB4 240 aa12.14□□□□□ -0.47
TRIM41-209ENST00000515834 FAM207AQ9NSI2 230 aaPredicted RBP12.14□□□□□ -0.47
TRIM41-209ENST00000515834 ANAPC5Q9UJX4 755 aa12.14□□□□□ -0.47
TRIM41-209ENST00000515834 FMNL1O95466 1100 aaPredicted RBP12.14□□□□□ -0.47
TRIM41-209ENST00000515834 KAZNQ674X7 775 aa12.14□□□□□ -0.47
TRIM41-209ENST00000515834 ZNF772Q68DY9 489 aaPredicted RBP12.14□□□□□ -0.47
TRIM41-209ENST00000515834 PEX26Q7Z412 305 aa12.14□□□□□ -0.47
TRIM41-209ENST00000515834 KRT12Q99456 494 aa12.14□□□□□ -0.47
TRIM41-209ENST00000515834 NAPGQ99747 312 aaPredicted RBP12.14□□□□□ -0.47
TRIM41-209ENST00000515834 UBN1Q9NPG3 1134 aa12.14□□□□□ -0.47
TRIM41-209ENST00000515834 ATP8A2Q9NTI2 1148 aa12.14□□□□□ -0.47
TRIM41-209ENST00000515834 PPP2R3AQ06190 1150 aa12.14□□□□□ -0.47
TRIM41-209ENST00000515834 TRIM14Q14142 442 aa12.14□□□□□ -0.47
TRIM41-209ENST00000515834 TYW1BQ6NUM6 668 aa12.14□□□□□ -0.47
TRIM41-209ENST00000515834 CCDC62Q6P9F0 684 aa12.14□□□□□ -0.47
TRIM41-209ENST00000515834 ATP2A3Q93084 1043 aa12.14□□□□□ -0.47
TRIM41-209ENST00000515834 CCDC127Q96BQ5 260 aa12.14□□□□□ -0.47
TRIM41-209ENST00000515834 RABEP2Q9H5N1 569 aa12.14□□□□□ -0.47
TRIM41-209ENST00000515834 EBAG9O00559 213 aa12.13□□□□□ -0.47
TRIM41-209ENST00000515834 RAD17O75943 681 aa12.13□□□□□ -0.47
TRIM41-209ENST00000515834 NBPF11Q86T75 865 aa12.13□□□□□ -0.47
TRIM41-209ENST00000515834 CUTAO60888 179 aa12.13□□□□□ -0.47
TRIM41-209ENST00000515834 RRAGAQ7L523 313 aa12.13□□□□□ -0.47
TRIM41-209ENST00000515834 FTOQ9C0B1 505 aaKnown RBP eCLIP12.13□□□□□ -0.47
TRIM41-209ENST00000515834 DDX25Q9UHL0 483 aaKnown RBP12.13□□□□□ -0.47
TRIM41-209ENST00000515834 KDM3AQ9Y4C1 1321 aa12.13□□□□□ -0.47
TRIM41-209ENST00000515834 ZNF608Q9ULD9 1512 aaPredicted RBP12.13□□□□□ -0.47
TRIM41-209ENST00000515834 MAP7Q14244 749 aa12.13□□□□□ -0.47
TRIM41-209ENST00000515834 SPDYE1Q8NFV5 336 aaPredicted RBP12.13□□□□□ -0.47
TRIM41-209ENST00000515834 PRIMPOLQ96LW4 560 aa12.13□□□□□ -0.47
TRIM41-209ENST00000515834 C1orf112Q9NSG2 853 aa12.13□□□□□ -0.47
TRIM41-209ENST00000515834 FEZ2Q9UHY8 353 aaPredicted RBP12.13□□□□□ -0.47
TRIM41-209ENST00000515834 UBN2Q6ZU65 1347 aa12.13□□□□□ -0.47
TRIM41-209ENST00000515834 CSRNP1Q96S65 589 aa12.13□□□□□ -0.47
TRIM41-209ENST00000515834 SLITRK6Q9H5Y7 841 aa12.13□□□□□ -0.47
TRIM41-209ENST00000515834 ABCA10Q8WWZ4 1543 aa12.13□□□□□ -0.47
TRIM41-209ENST00000515834 PFDN6O15212 129 aa12.13□□□□□ -0.47
TRIM41-209ENST00000515834 PPP4R1Q8TF05 950 aa12.13□□□□□ -0.47
TRIM41-209ENST00000515834 MCUR1Q96AQ8 359 aa12.13□□□□□ -0.47
TRIM41-209ENST00000515834 NUP58Q9BVL2 599 aa12.13□□□□□ -0.47
TRIM41-209ENST00000515834 NT5C3AQ9H0P0 336 aa12.13□□□□□ -0.47
TRIM41-209ENST00000515834 A0A1W2PP64 1363 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms