RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, human

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-231	ENST00000515620	MICALL1	Q8N3F8	863 aa		12.81	□□□□□ -0.36
CLDND1-231	ENST00000515620	NUP133	Q8WUM0	1156 aa		12.81	□□□□□ -0.36
CLDND1-231	ENST00000515620	ATG4C	Q96DT6	458 aa		12.81	□□□□□ -0.36
CLDND1-231	ENST00000515620	CDCA7L	Q96GN5	454 aa		12.81	□□□□□ -0.36
CLDND1-231	ENST00000515620	DBNDD2	Q9BQY9	259 aa		12.81	□□□□□ -0.36
CLDND1-231	ENST00000515620	HCN4	Q9Y3Q4	1203 aa		12.81	□□□□□ -0.36
CLDND1-231	ENST00000515620	SYNRG	Q9UMZ2	1314 aa		12.81	□□□□□ -0.36
CLDND1-231	ENST00000515620	MYO5A	Q9Y4I1	1855 aa	Known RBP	12.8	□□□□□ -0.36
CLDND1-231	ENST00000515620	APBB1	O00213	710 aa		12.8	□□□□□ -0.36
CLDND1-231	ENST00000515620	ADAMTS4	O75173	837 aa		12.8	□□□□□ -0.36
CLDND1-231	ENST00000515620	IDH1	O75874	414 aa	Known RBP	12.8	□□□□□ -0.36
CLDND1-231	ENST00000515620	ACR	P10323	421 aa		12.8	□□□□□ -0.36
CLDND1-231	ENST00000515620	DSG3	P32926	999 aa		12.8	□□□□□ -0.36
CLDND1-231	ENST00000515620	PLCD1	P51178	756 aa		12.8	□□□□□ -0.36
CLDND1-231	ENST00000515620	TFF2	Q03403	129 aa		12.8	□□□□□ -0.36
CLDND1-231	ENST00000515620	RAB30	Q15771	203 aa		12.8	□□□□□ -0.36
CLDND1-231	ENST00000515620	KIAA1755	Q5JYT7	1200 aa		12.8	□□□□□ -0.36
CLDND1-231	ENST00000515620	CCDC158	Q5M9N0	1113 aa		12.8	□□□□□ -0.36
CLDND1-231	ENST00000515620	PSRC1	Q6PGN9	363 aa	Predicted RBP	12.8	□□□□□ -0.36
CLDND1-231	ENST00000515620	ZNF365	Q70YC5	407 aa		12.8	□□□□□ -0.36
CLDND1-231	ENST00000515620	MMP19	Q99542	508 aa		12.8	□□□□□ -0.36
CLDND1-231	ENST00000515620	TINF2	Q9BSI4	451 aa		12.8	□□□□□ -0.36
CLDND1-231	ENST00000515620	TSEN34	Q9BSV6	310 aa	Known RBP	12.8	□□□□□ -0.36
CLDND1-231	ENST00000515620	TSPYL2	Q9H2G4	693 aa	Predicted RBP	12.8	□□□□□ -0.36
CLDND1-231	ENST00000515620	NKX2-4	Q9H2Z4	354 aa		12.8	□□□□□ -0.36
CLDND1-231	ENST00000515620	CXXC1	Q9P0U4	656 aa	Predicted RBP	12.8	□□□□□ -0.36
CLDND1-231	ENST00000515620	MSRA	Q9UJ68	235 aa		12.8	□□□□□ -0.36
CLDND1-231	ENST00000515620	CHD9	Q3L8U1	2897 aa		12.8	□□□□□ -0.36
CLDND1-231	ENST00000515620	PNMA6E	A0A0J9YXQ4	647 aa		12.79	□□□□□ -0.36
CLDND1-231	ENST00000515620	ANP32C	O43423	234 aa		12.79	□□□□□ -0.36
CLDND1-231	ENST00000515620	ZNF865	P0CJ78	1059 aa	Predicted RBP	12.79	□□□□□ -0.36
CLDND1-231	ENST00000515620	ATXN8OS	P0DMR3	200 aa		12.79	□□□□□ -0.36
CLDND1-231	ENST00000515620	KCNQ1	P51787	676 aa		12.79	□□□□□ -0.36
CLDND1-231	ENST00000515620	TNNI3K	Q59H18	835 aa		12.79	□□□□□ -0.36
CLDND1-231	ENST00000515620	SPICE1	Q8N0Z3	855 aa		12.79	□□□□□ -0.36
CLDND1-231	ENST00000515620	PPP1R12C	Q9BZL4	782 aa		12.79	□□□□□ -0.36
CLDND1-231	ENST00000515620	CNPY2	Q9Y2B0	182 aa		12.79	□□□□□ -0.36
CLDND1-231	ENST00000515620	FPGT-TNNI3K	V9GXZ4	949 aa		12.79	□□□□□ -0.36
CLDND1-231	ENST00000515620	SYNGAP1	Q96PV0	1343 aa		12.79	□□□□□ -0.36
CLDND1-231	ENST00000515620	MYADML2	A6NDP7	307 aa		12.78	□□□□□ -0.36
CLDND1-231	ENST00000515620	MOXD2P	A6NHM9	499 aa		12.78	□□□□□ -0.36
CLDND1-231	ENST00000515620	BMP1	P13497	986 aa		12.78	□□□□□ -0.36
CLDND1-231	ENST00000515620	EVX2	Q03828	476 aa		12.78	□□□□□ -0.36
CLDND1-231	ENST00000515620	SLFN5	Q08AF3	891 aa		12.78	□□□□□ -0.36
CLDND1-231	ENST00000515620	KCTD2	Q14681	263 aa		12.78	□□□□□ -0.36
CLDND1-231	ENST00000515620	TMEM132B	Q14DG7	1078 aa		12.78	□□□□□ -0.36
CLDND1-231	ENST00000515620	KCNA10	Q16322	511 aa		12.78	□□□□□ -0.36
CLDND1-231	ENST00000515620	CERS3	Q8IU89	383 aa		12.78	□□□□□ -0.36
CLDND1-231	ENST00000515620	CLEC10A	Q8IUN9	316 aa		12.78	□□□□□ -0.36
CLDND1-231	ENST00000515620	TMEM199	Q8N511	208 aa		12.78	□□□□□ -0.36
CLDND1-231	ENST00000515620	MAGEB6	Q8N7X4	407 aa		12.78	□□□□□ -0.36
CLDND1-231	ENST00000515620	LRFN3	Q9BTN0	628 aa		12.78	□□□□□ -0.36
CLDND1-231	ENST00000515620	SLC28A3	Q9HAS3	691 aa		12.78	□□□□□ -0.36
CLDND1-231	ENST00000515620	YBX2	Q9Y2T7	364 aa	Known RBP	12.78	□□□□□ -0.36
CLDND1-231	ENST00000515620	MROH7	Q68CQ1	1323 aa		12.78	□□□□□ -0.36
CLDND1-231	ENST00000515620	SMCHD1	A6NHR9	2005 aa		12.78	□□□□□ -0.36
CLDND1-231	ENST00000515620	NAV1	Q8NEY1	1877 aa		12.77	□□□□□ -0.37
CLDND1-231	ENST00000515620	IGSF3	O75054	1194 aa		12.77	□□□□□ -0.37
CLDND1-231	ENST00000515620	SLC25A27	O95847	323 aa		12.77	□□□□□ -0.37
CLDND1-231	ENST00000515620	POLR3D	P05423	398 aa	Predicted RBP	12.77	□□□□□ -0.37
CLDND1-231	ENST00000515620	GABPA	Q06546	454 aa		12.77	□□□□□ -0.37
CLDND1-231	ENST00000515620	SKIV2L	Q15477	1246 aa	Known RBP	12.77	□□□□□ -0.37
CLDND1-231	ENST00000515620	ZNF792	Q3KQV3	632 aa		12.77	□□□□□ -0.37
CLDND1-231	ENST00000515620	KLHDC9	Q8NEP7	349 aa		12.77	□□□□□ -0.37
CLDND1-231	ENST00000515620	GLT1D1	Q96MS3	346 aa		12.77	□□□□□ -0.37
CLDND1-231	ENST00000515620	TCF20	Q9UGU0	1960 aa	Known RBP	12.76	□□□□□ -0.37
CLDND1-231	ENST00000515620	CYP2C18	P33260	490 aa		12.76	□□□□□ -0.37
CLDND1-231	ENST00000515620	IRX5	P78411	483 aa	Predicted RBP	12.76	□□□□□ -0.37
CLDND1-231	ENST00000515620	OS9	Q13438	667 aa	Predicted RBP	12.76	□□□□□ -0.37
CLDND1-231	ENST00000515620	AAK1	Q2M2I8	961 aa		12.76	□□□□□ -0.37
CLDND1-231	ENST00000515620	CCSAP	Q6IQ19	270 aa	Predicted RBP	12.76	□□□□□ -0.37
CLDND1-231	ENST00000515620	HERVK_113	Q902F9	699 aa		12.76	□□□□□ -0.37
CLDND1-231	ENST00000515620	VTI1A	Q96AJ9	217 aa		12.76	□□□□□ -0.37
CLDND1-231	ENST00000515620	ZNF512B	Q96KM6	892 aa	Predicted RBP	12.76	□□□□□ -0.37
CLDND1-231	ENST00000515620	MTIF3	Q9H2K0	278 aa	Known RBP	12.76	□□□□□ -0.37
CLDND1-231	ENST00000515620	EPHX3	Q9H6B9	360 aa		12.76	□□□□□ -0.37
CLDND1-231	ENST00000515620	GPR108	Q9NPR9	543 aa		12.76	□□□□□ -0.37
CLDND1-231	ENST00000515620	TLR7	Q9NYK1	1049 aa	Known RBP	12.76	□□□□□ -0.37
CLDND1-231	ENST00000515620	ZHX1	Q9UKY1	873 aa	Predicted RBP	12.76	□□□□□ -0.37
CLDND1-231	ENST00000515620	DIS3	Q9Y2L1	958 aa	Known RBP	12.76	□□□□□ -0.37
CLDND1-231	ENST00000515620	ARIH1	Q9Y4X5	557 aa	Predicted RBP	12.76	□□□□□ -0.37
CLDND1-231	ENST00000515620	MYO9B	Q13459	2157 aa		12.76	□□□□□ -0.37
CLDND1-231	ENST00000515620		A0A0U1RQG5	324 aa	Predicted RBP	12.75	□□□□□ -0.37
CLDND1-231	ENST00000515620	ELP1	O95163	1332 aa		12.75	□□□□□ -0.37
CLDND1-231	ENST00000515620	GNAI2	P04899	355 aa		12.75	□□□□□ -0.37
CLDND1-231	ENST00000515620	ASGR1	P07306	291 aa		12.75	□□□□□ -0.37
CLDND1-231	ENST00000515620	C6orf222	P0C671	652 aa	Predicted RBP	12.75	□□□□□ -0.37
CLDND1-231	ENST00000515620	CDK7	P50613	346 aa		12.75	□□□□□ -0.37
CLDND1-231	ENST00000515620	ICA1	Q05084	483 aa		12.75	□□□□□ -0.37
CLDND1-231	ENST00000515620	TMEM31	Q5JXX7	168 aa		12.75	□□□□□ -0.37
CLDND1-231	ENST00000515620	PPP2R2D	Q66LE6	453 aa		12.75	□□□□□ -0.37
CLDND1-231	ENST00000515620	TMEM179	Q6ZVK1	233 aa		12.75	□□□□□ -0.37
CLDND1-231	ENST00000515620	RIOX2	Q8IUF8	465 aa		12.75	□□□□□ -0.37
CLDND1-231	ENST00000515620	ARHGEF10L	Q9HCE6	1279 aa		12.75	□□□□□ -0.37
CLDND1-231	ENST00000515620	IL23A	Q9NPF7	189 aa		12.75	□□□□□ -0.37
CLDND1-231	ENST00000515620	DBNL	Q9UJU6	430 aa	Known RBP	12.75	□□□□□ -0.37
CLDND1-231	ENST00000515620	FAM184B	Q9ULE4	1060 aa		12.75	□□□□□ -0.37
CLDND1-231	ENST00000515620	GBF1	Q92538	1859 aa		12.74	□□□□□ -0.37
CLDND1-231	ENST00000515620	COL11A1	P12107	1806 aa	Predicted RBP	12.74	□□□□□ -0.37
CLDND1-231	ENST00000515620	PARP14	Q460N5	1801 aa		12.74	□□□□□ -0.37

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