RNA–Protein interactions for RNA: ENST00000515215.6

SNCAIP-221, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 1,708 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-221ENST00000515215 POTEIP0CG38 1075 aa14.52□□□□□ -0.08
SNCAIP-221ENST00000515215 POTEJP0CG39 1038 aa14.52□□□□□ -0.08
SNCAIP-221ENST00000515215 FOSBP53539 338 aa14.52□□□□□ -0.08
SNCAIP-221ENST00000515215 AKAP17AQ02040 695 aaKnown RBP14.52□□□□□ -0.08
SNCAIP-221ENST00000515215 NOL9Q5SY16 702 aaKnown RBP14.52□□□□□ -0.08
SNCAIP-221ENST00000515215 GPATCH4Q5T3I0 446 aaKnown RBP14.52□□□□□ -0.08
SNCAIP-221ENST00000515215 OTUD7BQ6GQQ9 843 aa14.52□□□□□ -0.08
SNCAIP-221ENST00000515215 CCDC84Q86UT8 332 aaPredicted RBP14.52□□□□□ -0.08
SNCAIP-221ENST00000515215 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.52□□□□□ -0.08
SNCAIP-221ENST00000515215 SHISA4Q96DD7 197 aa14.52□□□□□ -0.08
SNCAIP-221ENST00000515215 CDCA5Q96FF9 252 aa14.52□□□□□ -0.08
SNCAIP-221ENST00000515215 GLIS2Q9BZE0 524 aaPredicted RBP14.52□□□□□ -0.08
SNCAIP-221ENST00000515215 CPVLQ9H3G5 476 aa14.52□□□□□ -0.08
SNCAIP-221ENST00000515215 RIOX1Q9H6W3 641 aa14.52□□□□□ -0.08
SNCAIP-221ENST00000515215 RBM27Q9P2N5 1060 aaKnown RBP14.52□□□□□ -0.08
SNCAIP-221ENST00000515215 FRMPD2Q68DX3 1309 aaPredicted RBP14.52□□□□□ -0.08
SNCAIP-221ENST00000515215 hCG_1642624A0A1W2PR95 340 aa14.52□□□□□ -0.09
SNCAIP-221ENST00000515215 BAG4O95429 457 aaKnown RBP14.52□□□□□ -0.09
SNCAIP-221ENST00000515215 VEGFAP15692 232 aaPredicted RBP14.52□□□□□ -0.09
SNCAIP-221ENST00000515215 GUCY1B3Q02153 619 aa14.52□□□□□ -0.09
SNCAIP-221ENST00000515215 RESTQ13127 1097 aa14.52□□□□□ -0.09
SNCAIP-221ENST00000515215 PFKFB3Q16875 520 aaPredicted RBP14.52□□□□□ -0.09
SNCAIP-221ENST00000515215 KIAA1755Q5JYT7 1200 aa14.52□□□□□ -0.09
SNCAIP-221ENST00000515215 ZKSCAN4Q969J2 545 aaPredicted RBP14.52□□□□□ -0.09
SNCAIP-221ENST00000515215 RRAGCQ9HB90 399 aa14.52□□□□□ -0.09
SNCAIP-221ENST00000515215 SLC1A4P43007 532 aa14.51□□□□□ -0.09
SNCAIP-221ENST00000515215 KRT40Q6A162 431 aa14.51□□□□□ -0.09
SNCAIP-221ENST00000515215 TTBK2Q6IQ55 1244 aa14.51□□□□□ -0.09
SNCAIP-221ENST00000515215 KCTD1Q719H9 257 aa14.51□□□□□ -0.09
SNCAIP-221ENST00000515215 FERMT3Q86UX7 667 aa14.51□□□□□ -0.09
SNCAIP-221ENST00000515215 UBA5Q9GZZ9 404 aa14.51□□□□□ -0.09
SNCAIP-221ENST00000515215 SH2D4AQ9H788 454 aa14.51□□□□□ -0.09
SNCAIP-221ENST00000515215 VCPKMTQ9H867 229 aa14.51□□□□□ -0.09
SNCAIP-221ENST00000515215 GPCPD1Q9NPB8 672 aa14.51□□□□□ -0.09
SNCAIP-221ENST00000515215 SCG2P13521 617 aa14.5□□□□□ -0.09
SNCAIP-221ENST00000515215 NFKBIBQ15653 356 aa14.5□□□□□ -0.09
SNCAIP-221ENST00000515215 CCDC96Q2M329 555 aa14.5□□□□□ -0.09
SNCAIP-221ENST00000515215 CHAMP1Q96JM3 812 aa14.5□□□□□ -0.09
SNCAIP-221ENST00000515215 GOPCQ9HD26 462 aa14.5□□□□□ -0.09
SNCAIP-221ENST00000515215 PPP1R12BO60237 982 aaPredicted RBP14.49□□□□□ -0.09
SNCAIP-221ENST00000515215 PTPRAP18433 802 aa14.49□□□□□ -0.09
SNCAIP-221ENST00000515215 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.49□□□□□ -0.09
SNCAIP-221ENST00000515215 MTMR8Q96EF0 704 aa14.49□□□□□ -0.09
SNCAIP-221ENST00000515215 GBP4Q96PP9 640 aa14.49□□□□□ -0.09
SNCAIP-221ENST00000515215 WDR18Q9BV38 432 aa14.49□□□□□ -0.09
SNCAIP-221ENST00000515215 ZSCAN16Q9H4T2 348 aaPredicted RBP14.49□□□□□ -0.09
SNCAIP-221ENST00000515215 RAD21O60216 631 aa14.49□□□□□ -0.09
SNCAIP-221ENST00000515215 MMP1P03956 469 aa14.49□□□□□ -0.09
SNCAIP-221ENST00000515215 BMP3P12645 472 aa14.49□□□□□ -0.09
SNCAIP-221ENST00000515215 KIF23Q02241 960 aaPredicted RBP14.49□□□□□ -0.09
SNCAIP-221ENST00000515215 PRKG1Q13976 671 aa14.49□□□□□ -0.09
SNCAIP-221ENST00000515215 MAP3K11Q16584 847 aa14.49□□□□□ -0.09
SNCAIP-221ENST00000515215 BTNL9Q6UXG8 535 aa14.49□□□□□ -0.09
SNCAIP-221ENST00000515215 NUP88Q99567 741 aaPredicted RBP14.49□□□□□ -0.09
SNCAIP-221ENST00000515215 KIAA1683Q9H0B3 1180 aa14.49□□□□□ -0.09
SNCAIP-221ENST00000515215 JMJD4Q9H9V9 463 aa14.49□□□□□ -0.09
SNCAIP-221ENST00000515215 PICK1Q9NRD5 415 aa14.49□□□□□ -0.09
SNCAIP-221ENST00000515215 VPS54Q9P1Q0 977 aa14.49□□□□□ -0.09
SNCAIP-221ENST00000515215 ATP6V1DQ9Y5K8 247 aa14.49□□□□□ -0.09
SNCAIP-221ENST00000515215 PTPRFP10586 1907 aa14.48□□□□□ -0.09
SNCAIP-221ENST00000515215 KIF28PB7ZC32 967 aa14.48□□□□□ -0.09
SNCAIP-221ENST00000515215 MCM4P33991 863 aa14.48□□□□□ -0.09
SNCAIP-221ENST00000515215 SLC16A2P36021 539 aa14.48□□□□□ -0.09
SNCAIP-221ENST00000515215 MAP3K9P80192 1104 aa14.48□□□□□ -0.09
SNCAIP-221ENST00000515215 TRIM29Q14134 588 aa14.48□□□□□ -0.09
SNCAIP-221ENST00000515215 MAP1SQ66K74 1059 aaPredicted RBP14.48□□□□□ -0.09
SNCAIP-221ENST00000515215 LDHDQ86WU2 507 aa14.48□□□□□ -0.09
SNCAIP-221ENST00000515215 ADGRF4Q8IZF3 695 aa14.48□□□□□ -0.09
SNCAIP-221ENST00000515215 SPICE1Q8N0Z3 855 aa14.48□□□□□ -0.09
SNCAIP-221ENST00000515215 PIBF1Q8WXW3 757 aa14.48□□□□□ -0.09
SNCAIP-221ENST00000515215 PIGSQ96S52 555 aa14.48□□□□□ -0.09
SNCAIP-221ENST00000515215 PHF20Q9BVI0 1012 aa14.48□□□□□ -0.09
SNCAIP-221ENST00000515215 NMRK2Q9NPI5 230 aa14.48□□□□□ -0.09
SNCAIP-221ENST00000515215 KCNJ14Q9UNX9 436 aa14.48□□□□□ -0.09
SNCAIP-221ENST00000515215 CLEC11AQ9Y240 323 aa14.48□□□□□ -0.09
SNCAIP-221ENST00000515215 SNCAIPQ9Y6H5 919 aa14.48□□□□□ -0.09
SNCAIP-221ENST00000515215 USP17L10C9JJH3 530 aa14.47□□□□□ -0.09
SNCAIP-221ENST00000515215 XBP1P17861 261 aa14.47□□□□□ -0.09
SNCAIP-221ENST00000515215 NF2P35240 595 aa14.47□□□□□ -0.09
SNCAIP-221ENST00000515215 VGLL4Q14135 290 aa14.47□□□□□ -0.09
SNCAIP-221ENST00000515215 NPY5RQ15761 445 aa14.47□□□□□ -0.09
SNCAIP-221ENST00000515215 WWC2Q6AWC2 1192 aa14.47□□□□□ -0.09
SNCAIP-221ENST00000515215 MCTP1Q6DN14 999 aa14.47□□□□□ -0.09
SNCAIP-221ENST00000515215 TYW1BQ6NUM6 668 aa14.47□□□□□ -0.09
SNCAIP-221ENST00000515215 FAM173BQ6P4H8 233 aa14.47□□□□□ -0.09
SNCAIP-221ENST00000515215 RRP36Q96EU6 259 aaKnown RBP14.47□□□□□ -0.09
SNCAIP-221ENST00000515215 AS3MTQ9HBK9 375 aa14.47□□□□□ -0.09
SNCAIP-221ENST00000515215 VAT1LQ9HCJ6 419 aa14.47□□□□□ -0.09
SNCAIP-221ENST00000515215 SH3GLB2Q9NR46 395 aa14.47□□□□□ -0.09
SNCAIP-221ENST00000515215 U2AF2P26368 475 aaKnown RBP eCLIP14.46□□□□□ -0.09
SNCAIP-221ENST00000515215 IREB2P48200 963 aaKnown RBP14.46□□□□□ -0.09
SNCAIP-221ENST00000515215 ZYXQ15942 572 aaKnown RBP14.46□□□□□ -0.09
SNCAIP-221ENST00000515215 FOXD4L6Q3SYB3 417 aaPredicted RBP14.46□□□□□ -0.09
SNCAIP-221ENST00000515215 FAM83BQ5T0W9 1011 aa14.46□□□□□ -0.09
SNCAIP-221ENST00000515215 FOXD4L3Q6VB84 417 aaPredicted RBP14.46□□□□□ -0.09
SNCAIP-221ENST00000515215 HOMER1Q86YM7 354 aa14.46□□□□□ -0.09
SNCAIP-221ENST00000515215 FAM177A1Q8N128 213 aaPredicted RBP14.46□□□□□ -0.09
SNCAIP-221ENST00000515215 ZNF280CQ8ND82 737 aa14.46□□□□□ -0.09
SNCAIP-221ENST00000515215 LPAR1Q92633 364 aa14.46□□□□□ -0.09
SNCAIP-221ENST00000515215 GPKOWQ92917 476 aaPredicted RBP eCLIP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms