RNA–Protein interactions for RNA: ENST00000515066.6

AP3S1-208, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 2

Gene AP3S1, Length 1,670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-208ENST00000515066 SMCHD1A6NHR9 2005 aa19.54■□□□□ 0.72
AP3S1-208ENST00000515066 CYTH3O43739 400 aa19.54■□□□□ 0.72
AP3S1-208ENST00000515066 FKBP1BP68106 108 aa19.54■□□□□ 0.72
AP3S1-208ENST00000515066 DGKZQ13574 1117 aa19.54■□□□□ 0.72
AP3S1-208ENST00000515066 MTMR2Q13614 643 aa19.54■□□□□ 0.72
AP3S1-208ENST00000515066 ZYXQ15942 572 aaKnown RBP19.54■□□□□ 0.72
AP3S1-208ENST00000515066 ASPRV1Q53RT3 343 aa19.54■□□□□ 0.72
AP3S1-208ENST00000515066 ZNF280CQ8ND82 737 aa19.54■□□□□ 0.72
AP3S1-208ENST00000515066 DCAF4Q8WV16 495 aa19.54■□□□□ 0.72
AP3S1-208ENST00000515066 NUP88Q99567 741 aaPredicted RBP19.54■□□□□ 0.72
AP3S1-208ENST00000515066 CPVLQ9H3G5 476 aa19.54■□□□□ 0.72
AP3S1-208ENST00000515066 GBA2Q9HCG7 927 aaPredicted RBP19.54■□□□□ 0.72
AP3S1-208ENST00000515066 CWC22Q9HCG8 908 aaKnown RBP19.54■□□□□ 0.72
AP3S1-208ENST00000515066 GOPCQ9HD26 462 aa19.54■□□□□ 0.72
AP3S1-208ENST00000515066 AFG3L2Q9Y4W6 797 aa19.54■□□□□ 0.72
AP3S1-208ENST00000515066 USP17L10C9JJH3 530 aa19.53■□□□□ 0.72
AP3S1-208ENST00000515066 KLRF2D3W0D1 207 aa19.53■□□□□ 0.72
AP3S1-208ENST00000515066 RAD21O60216 631 aa19.53■□□□□ 0.72
AP3S1-208ENST00000515066 CDKL5O76039 1030 aa19.53■□□□□ 0.72
AP3S1-208ENST00000515066 FMNL1O95466 1100 aaPredicted RBP19.53■□□□□ 0.72
AP3S1-208ENST00000515066 SLC1A4P43007 532 aa19.53■□□□□ 0.72
AP3S1-208ENST00000515066 HMGN5P82970 282 aaKnown RBP19.53■□□□□ 0.72
AP3S1-208ENST00000515066 CPLX2Q6PUV4 134 aaKnown RBP19.53■□□□□ 0.72
AP3S1-208ENST00000515066 KCTD1Q719H9 257 aa19.53■□□□□ 0.72
AP3S1-208ENST00000515066 FEZ1Q99689 392 aa19.53■□□□□ 0.72
AP3S1-208ENST00000515066 ELP3Q9H9T3 547 aa19.53■□□□□ 0.72
AP3S1-208ENST00000515066 AS3MTQ9HBK9 375 aa19.53■□□□□ 0.72
AP3S1-208ENST00000515066 STK36Q9NRP7 1315 aa19.53■□□□□ 0.72
AP3S1-208ENST00000515066 SPDYE5A6NIY4 337 aa19.52■□□□□ 0.72
AP3S1-208ENST00000515066 TRIM75PA6NK02 468 aa19.52■□□□□ 0.72
AP3S1-208ENST00000515066 BACE1P56817 501 aa19.52■□□□□ 0.72
AP3S1-208ENST00000515066 GPATCH4Q5T3I0 446 aaKnown RBP19.52■□□□□ 0.72
AP3S1-208ENST00000515066 TTBK2Q6IQ55 1244 aa19.52■□□□□ 0.72
AP3S1-208ENST00000515066 EMILIN3Q9NT22 766 aa19.52■□□□□ 0.72
AP3S1-208ENST00000515066 ORC3Q9UBD5 711 aaPredicted RBP19.52■□□□□ 0.72
AP3S1-208ENST00000515066 GNAQP50148 359 aa19.52■□□□□ 0.71
AP3S1-208ENST00000515066 CCDC96Q2M329 555 aa19.52■□□□□ 0.71
AP3S1-208ENST00000515066 ERO1BQ86YB8 467 aa19.52■□□□□ 0.71
AP3S1-208ENST00000515066 SPZ1Q9BXG8 430 aa19.52■□□□□ 0.71
AP3S1-208ENST00000515066 SLC26A6Q9BXS9 759 aa19.52■□□□□ 0.71
AP3S1-208ENST00000515066 RNF26Q9BY78 433 aaPredicted RBP19.52■□□□□ 0.71
AP3S1-208ENST00000515066 GPCPD1Q9NPB8 672 aa19.52■□□□□ 0.71
AP3S1-208ENST00000515066 UNCXA6NJT0 531 aa19.51■□□□□ 0.71
AP3S1-208ENST00000515066 YY1P25490 414 aa19.51■□□□□ 0.71
AP3S1-208ENST00000515066 PKP1Q13835 747 aa19.51■□□□□ 0.71
AP3S1-208ENST00000515066 ZNF784Q8NCA9 323 aaPredicted RBP19.51■□□□□ 0.71
AP3S1-208ENST00000515066 LPAR1Q92633 364 aa19.51■□□□□ 0.71
AP3S1-208ENST00000515066 hCG_1642624A0A1W2PR95 340 aa19.5■□□□□ 0.71
AP3S1-208ENST00000515066 IRF6O14896 467 aa19.5■□□□□ 0.71
AP3S1-208ENST00000515066 BMP3P12645 472 aa19.5■□□□□ 0.71
AP3S1-208ENST00000515066 SMARCA1P28370 1054 aa19.5■□□□□ 0.71
AP3S1-208ENST00000515066 PPATQ06203 517 aa19.5■□□□□ 0.71
AP3S1-208ENST00000515066 SSRP1Q08945 709 aaKnown RBP19.5■□□□□ 0.71
AP3S1-208ENST00000515066 PKN1Q16512 942 aa19.5■□□□□ 0.71
AP3S1-208ENST00000515066 FAM83BQ5T0W9 1011 aa19.5■□□□□ 0.71
AP3S1-208ENST00000515066 OTUD5Q96G74 571 aa19.5■□□□□ 0.71
AP3S1-208ENST00000515066 AIFM3Q96NN9 605 aa19.5■□□□□ 0.71
AP3S1-208ENST00000515066 LZTS2Q9BRK4 669 aa19.5■□□□□ 0.71
AP3S1-208ENST00000515066 UBA5Q9GZZ9 404 aa19.5■□□□□ 0.71
AP3S1-208ENST00000515066 RIOX1Q9H6W3 641 aa19.5■□□□□ 0.71
AP3S1-208ENST00000515066 COL11A1P12107 1806 aaPredicted RBP19.5■□□□□ 0.71
AP3S1-208ENST00000515066 PRPF3O43395 683 aaKnown RBP19.49■□□□□ 0.71
AP3S1-208ENST00000515066 SYT1P21579 422 aa19.49■□□□□ 0.71
AP3S1-208ENST00000515066 SLC16A2P36021 539 aa19.49■□□□□ 0.71
AP3S1-208ENST00000515066 HMGCS2P54868 508 aa19.49■□□□□ 0.71
AP3S1-208ENST00000515066 C2orf69Q8N8R5 385 aa19.49■□□□□ 0.71
AP3S1-208ENST00000515066 SMC1BQ8NDV3 1235 aa19.49■□□□□ 0.71
AP3S1-208ENST00000515066 C12orf42Q96LP6 360 aa19.49■□□□□ 0.71
AP3S1-208ENST00000515066 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.49■□□□□ 0.71
AP3S1-208ENST00000515066 V9GY48 417 aaPredicted RBP19.49■□□□□ 0.71
AP3S1-208ENST00000515066 TOMM70O94826 608 aa19.49■□□□□ 0.71
AP3S1-208ENST00000515066 VCAM1P19320 739 aa19.49■□□□□ 0.71
AP3S1-208ENST00000515066 GJA5P36382 358 aa19.49■□□□□ 0.71
AP3S1-208ENST00000515066 USP14P54578 494 aa19.49■□□□□ 0.71
AP3S1-208ENST00000515066 SH3D19Q5HYK7 790 aa19.49■□□□□ 0.71
AP3S1-208ENST00000515066 TRIM22Q8IYM9 498 aa19.49■□□□□ 0.71
AP3S1-208ENST00000515066 OPTNQ96CV9 577 aa19.49■□□□□ 0.71
AP3S1-208ENST00000515066 C19orf81C9J6K1 198 aa19.48■□□□□ 0.71
AP3S1-208ENST00000515066 WDR46O15213 610 aaKnown RBP19.48■□□□□ 0.71
AP3S1-208ENST00000515066 DEXIO95424 95 aa19.48■□□□□ 0.71
AP3S1-208ENST00000515066 PPIL2Q13356 520 aa19.48■□□□□ 0.71
AP3S1-208ENST00000515066 BTNL9Q6UXG8 535 aa19.48■□□□□ 0.71
AP3S1-208ENST00000515066 FAM184AQ8NB25 1140 aa19.48■□□□□ 0.71
AP3S1-208ENST00000515066 RBM46Q8TBY0 533 aaKnown RBP19.48■□□□□ 0.71
AP3S1-208ENST00000515066 SHISA4Q96DD7 197 aa19.48■□□□□ 0.71
AP3S1-208ENST00000515066 KCNH4Q9UQ05 1017 aa19.48■□□□□ 0.71
AP3S1-208ENST00000515066 TMEM232C9JQI7 657 aa19.47■□□□□ 0.71
AP3S1-208ENST00000515066 ADGRF4Q8IZF3 695 aa19.47■□□□□ 0.71
AP3S1-208ENST00000515066 MTMR8Q96EF0 704 aa19.47■□□□□ 0.71
AP3S1-208ENST00000515066 JMJD4Q9H9V9 463 aa19.47■□□□□ 0.71
AP3S1-208ENST00000515066 GJB4Q9NTQ9 266 aa19.47■□□□□ 0.71
AP3S1-208ENST00000515066 CIZ1Q9ULV3 898 aaPredicted RBP19.47■□□□□ 0.71
AP3S1-208ENST00000515066 TCHHQ07283 1943 aa19.47■□□□□ 0.71
AP3S1-208ENST00000515066 MYH15Q9Y2K3 1946 aa19.47■□□□□ 0.71
AP3S1-208ENST00000515066 LARP1BQ659C4 914 aaKnown RBP19.46■□□□□ 0.71
AP3S1-208ENST00000515066 PIBF1Q8WXW3 757 aa19.46■□□□□ 0.71
AP3S1-208ENST00000515066 ALG1Q9BT22 464 aa19.46■□□□□ 0.71
AP3S1-208ENST00000515066 ISY1Q9ULR0 285 aaKnown RBP19.46■□□□□ 0.71
AP3S1-208ENST00000515066 ZDHHC9Q9Y397 364 aa19.46■□□□□ 0.71
AP3S1-208ENST00000515066 A0A0G2JLL6 359 aaPredicted RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms