RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 HARSP12081 509 aaKnown RBP14.66□□□□□ -0.06
TCOF1-214ENST00000515035 DCUN1D2Q6PH85 259 aa14.66□□□□□ -0.06
TCOF1-214ENST00000515035 NELFCDQ8IXH7 590 aa14.66□□□□□ -0.06
TCOF1-214ENST00000515035 NRBP1Q9UHY1 535 aa14.66□□□□□ -0.06
TCOF1-214ENST00000515035 GPAA1O43292 621 aa14.65□□□□□ -0.06
TCOF1-214ENST00000515035 CTAGE3PQ8IX95 158 aa14.65□□□□□ -0.06
TCOF1-214ENST00000515035 CCDC13Q8IYE1 715 aa14.65□□□□□ -0.06
TCOF1-214ENST00000515035 SUDS3Q9H7L9 328 aaPredicted RBP14.65□□□□□ -0.06
TCOF1-214ENST00000515035 TARBP1Q13395 1621 aaKnown RBP14.65□□□□□ -0.06
TCOF1-214ENST00000515035 PPP2R5DQ14738 602 aa14.65□□□□□ -0.06
TCOF1-214ENST00000515035 HINFPQ9BQA5 517 aa14.65□□□□□ -0.06
TCOF1-214ENST00000515035 MYO1AQ9UBC5 1043 aa14.65□□□□□ -0.06
TCOF1-214ENST00000515035 PPP1R9AQ9ULJ8 1098 aa14.65□□□□□ -0.06
TCOF1-214ENST00000515035 BACH1O14867 736 aa14.65□□□□□ -0.06
TCOF1-214ENST00000515035 STMN1P16949 149 aa14.65□□□□□ -0.06
TCOF1-214ENST00000515035 TCP11Q8WWU5 503 aa14.65□□□□□ -0.06
TCOF1-214ENST00000515035 SLC52A2Q9HAB3 445 aa14.65□□□□□ -0.06
TCOF1-214ENST00000515035 MAGI2Q86UL8 1455 aa14.65□□□□□ -0.06
TCOF1-214ENST00000515035 CCDC169A6NNP5 214 aa14.65□□□□□ -0.06
TCOF1-214ENST00000515035 TTC6Q86TZ1 520 aa14.65□□□□□ -0.06
TCOF1-214ENST00000515035 CCDC197Q8NCU1 140 aa14.65□□□□□ -0.06
TCOF1-214ENST00000515035 UHMK1Q8TAS1 419 aaKnown RBP14.65□□□□□ -0.06
TCOF1-214ENST00000515035 ATP2A3Q93084 1043 aa14.65□□□□□ -0.06
TCOF1-214ENST00000515035 EFCC1Q9HA90 598 aa14.65□□□□□ -0.06
TCOF1-214ENST00000515035 TBC1D7Q9P0N9 293 aa14.65□□□□□ -0.06
TCOF1-214ENST00000515035 KAT6BQ8WYB5 2073 aa14.64□□□□□ -0.07
TCOF1-214ENST00000515035 BCRP11274 1271 aa14.64□□□□□ -0.07
TCOF1-214ENST00000515035 CASC4Q6P4E1 433 aa14.64□□□□□ -0.07
TCOF1-214ENST00000515035 KBTBD3Q8NAB2 608 aa14.64□□□□□ -0.07
TCOF1-214ENST00000515035 CCDC87Q9NVE4 849 aa14.64□□□□□ -0.07
TCOF1-214ENST00000515035 MGEA5O60502 916 aa14.64□□□□□ -0.07
TCOF1-214ENST00000515035 EXOC4Q96A65 974 aa14.64□□□□□ -0.07
TCOF1-214ENST00000515035 BUB1O43683 1085 aa14.64□□□□□ -0.07
TCOF1-214ENST00000515035 STK10O94804 968 aaKnown RBP14.64□□□□□ -0.07
TCOF1-214ENST00000515035 SUN1O94901 812 aa14.64□□□□□ -0.07
TCOF1-214ENST00000515035 LDHBP07195 334 aaKnown RBP14.64□□□□□ -0.07
TCOF1-214ENST00000515035 DNM2P50570 870 aa14.64□□□□□ -0.07
TCOF1-214ENST00000515035 SMTNP53814 917 aa14.64□□□□□ -0.07
TCOF1-214ENST00000515035 SATB1Q01826 763 aa14.64□□□□□ -0.07
TCOF1-214ENST00000515035 SP4Q02446 784 aa14.64□□□□□ -0.07
TCOF1-214ENST00000515035 GUCY2DQ02846 1103 aa14.64□□□□□ -0.07
TCOF1-214ENST00000515035 NCBP1Q09161 790 aaKnown RBP14.64□□□□□ -0.07
TCOF1-214ENST00000515035 PPP2R5AQ15172 486 aa14.64□□□□□ -0.07
TCOF1-214ENST00000515035 NONOQ15233 471 aaKnown RBP eCLIP14.64□□□□□ -0.07
TCOF1-214ENST00000515035 U2AF1L4Q8WU68 220 aaKnown RBP14.64□□□□□ -0.07
TCOF1-214ENST00000515035 EYA2O00167 538 aa14.64□□□□□ -0.07
TCOF1-214ENST00000515035 CHMP2AO43633 222 aa14.64□□□□□ -0.07
TCOF1-214ENST00000515035 CHAMP1Q96JM3 812 aa14.64□□□□□ -0.07
TCOF1-214ENST00000515035 JPH2Q9BR39 696 aaPredicted RBP14.64□□□□□ -0.07
TCOF1-214ENST00000515035 ARHGEF5Q12774 1597 aa14.64□□□□□ -0.07
TCOF1-214ENST00000515035 EXOC3O60645 756 aa14.63□□□□□ -0.07
TCOF1-214ENST00000515035 MAN1A1P33908 653 aa14.63□□□□□ -0.07
TCOF1-214ENST00000515035 ZNF827Q17R98 1081 aa14.63□□□□□ -0.07
TCOF1-214ENST00000515035 CCDC89Q8N998 374 aa14.63□□□□□ -0.07
TCOF1-214ENST00000515035 EPN1Q9Y6I3 576 aaPredicted RBP14.63□□□□□ -0.07
TCOF1-214ENST00000515035 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.63□□□□□ -0.07
TCOF1-214ENST00000515035 MORC3Q14149 939 aa14.63□□□□□ -0.07
TCOF1-214ENST00000515035 PRR16Q569H4 304 aa14.63□□□□□ -0.07
TCOF1-214ENST00000515035 HSP90AA5PQ58FG0 334 aa14.63□□□□□ -0.07
TCOF1-214ENST00000515035 CABP7Q86V35 215 aa14.63□□□□□ -0.07
TCOF1-214ENST00000515035 TDRD7Q8NHU6 1098 aaKnown RBP14.63□□□□□ -0.07
TCOF1-214ENST00000515035 GABPB2Q8TAK5 448 aaPredicted RBP14.63□□□□□ -0.07
TCOF1-214ENST00000515035 PKD2L1Q9P0L9 805 aa14.63□□□□□ -0.07
TCOF1-214ENST00000515035 SPATA31E1Q6ZUB1 1445 aa14.63□□□□□ -0.07
TCOF1-214ENST00000515035 PNMA6EA0A0J9YXQ4 647 aa14.63□□□□□ -0.07
TCOF1-214ENST00000515035 PRDM1O75626 825 aa14.63□□□□□ -0.07
TCOF1-214ENST00000515035 BAG6P46379 1132 aa14.63□□□□□ -0.07
TCOF1-214ENST00000515035 RBM6P78332 1123 aaKnown RBP14.63□□□□□ -0.07
TCOF1-214ENST00000515035 KLHDC4Q8TBB5 520 aa14.63□□□□□ -0.07
TCOF1-214ENST00000515035 ARMT1Q9H993 441 aa14.63□□□□□ -0.07
TCOF1-214ENST00000515035 IFNB1P01574 187 aa14.63□□□□□ -0.07
TCOF1-214ENST00000515035 ABCB4P21439 1286 aa14.63□□□□□ -0.07
TCOF1-214ENST00000515035 RASEFQ8IZ41 740 aa14.63□□□□□ -0.07
TCOF1-214ENST00000515035 METTL22Q9BUU2 404 aaPredicted RBP14.63□□□□□ -0.07
TCOF1-214ENST00000515035 IFNAR2P48551 515 aa14.62□□□□□ -0.07
TCOF1-214ENST00000515035 PPP2R5BQ15173 497 aa14.62□□□□□ -0.07
TCOF1-214ENST00000515035 ARHGAP44Q17R89 818 aa14.62□□□□□ -0.07
TCOF1-214ENST00000515035 LSM14BQ9BX40 385 aaKnown RBP14.62□□□□□ -0.07
TCOF1-214ENST00000515035 DENND2AQ9ULE3 1009 aa14.62□□□□□ -0.07
TCOF1-214ENST00000515035 B4DLN1 442 aa14.62□□□□□ -0.07
TCOF1-214ENST00000515035 STAT1P42224 750 aa14.62□□□□□ -0.07
TCOF1-214ENST00000515035 KRT25Q7Z3Z0 450 aa14.62□□□□□ -0.07
TCOF1-214ENST00000515035 WHAMMQ8TF30 809 aa14.62□□□□□ -0.07
TCOF1-214ENST00000515035 INTS9Q9NV88 658 aaKnown RBP14.62□□□□□ -0.07
TCOF1-214ENST00000515035 SPECC1L-ADORA2AF8WAN1 911 aa14.62□□□□□ -0.07
TCOF1-214ENST00000515035 RIMBP2O15034 1052 aa14.62□□□□□ -0.07
TCOF1-214ENST00000515035 VPS41P49754 854 aa14.62□□□□□ -0.07
TCOF1-214ENST00000515035 RAD51AP2Q09MP3 1159 aa14.62□□□□□ -0.07
TCOF1-214ENST00000515035 PTPROQ16827 1216 aa14.62□□□□□ -0.07
TCOF1-214ENST00000515035 SLC35F6Q8N357 371 aa14.62□□□□□ -0.07
TCOF1-214ENST00000515035 CMA1P23946 247 aa14.62□□□□□ -0.07
TCOF1-214ENST00000515035 PALM2Q8IXS6 379 aa14.62□□□□□ -0.07
TCOF1-214ENST00000515035 TRIML1Q8N9V2 468 aa14.62□□□□□ -0.07
TCOF1-214ENST00000515035 PPP4R1Q8TF05 950 aa14.62□□□□□ -0.07
TCOF1-214ENST00000515035 CACTINQ8WUQ7 758 aaKnown RBP14.62□□□□□ -0.07
TCOF1-214ENST00000515035 GPCPD1Q9NPB8 672 aa14.62□□□□□ -0.07
TCOF1-214ENST00000515035 CCDC151A5D8V7 595 aa14.61□□□□□ -0.07
TCOF1-214ENST00000515035 ARHGEF35A5YM69 484 aa14.61□□□□□ -0.07
TCOF1-214ENST00000515035 KSR1Q8IVT5 923 aa14.61□□□□□ -0.07
TCOF1-214ENST00000515035 KRT12Q99456 494 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms