RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 KLRC3Q07444 240 aa29.11■■■□□ 2.25
SNF8-213ENST00000514929 FAM47AQ5JRC9 791 aa29.11■■■□□ 2.25
SNF8-213ENST00000514929 NEDD1Q8NHV4 660 aa29.11■■■□□ 2.25
SNF8-213ENST00000514929 FBXO28Q9NVF7 368 aa29.11■■■□□ 2.25
SNF8-213ENST00000514929 MTMR4Q9NYA4 1195 aa29.11■■■□□ 2.25
SNF8-213ENST00000514929 CTDSPL2Q05D32 466 aa29.1■■■□□ 2.25
SNF8-213ENST00000514929 CCL14Q16627 93 aa29.1■■■□□ 2.25
SNF8-213ENST00000514929 PARP14Q460N5 1801 aa29.09■■■□□ 2.25
SNF8-213ENST00000514929 TTLL1O95922 423 aa29.09■■■□□ 2.25
SNF8-213ENST00000514929 PRKAR2AP13861 404 aaKnown RBP29.09■■■□□ 2.25
SNF8-213ENST00000514929 CAPN2P17655 700 aa29.09■■■□□ 2.25
SNF8-213ENST00000514929 SDSP20132 328 aa29.09■■■□□ 2.25
SNF8-213ENST00000514929 GRB14Q14449 540 aa29.09■■■□□ 2.25
SNF8-213ENST00000514929 ALX1Q15699 326 aa29.09■■■□□ 2.25
SNF8-213ENST00000514929 SHCBP1Q8NEM2 672 aa29.09■■■□□ 2.25
SNF8-213ENST00000514929 NUP88Q99567 741 aaPredicted RBP29.09■■■□□ 2.25
SNF8-213ENST00000514929 PLIN4Q96Q06 1357 aa29.09■■■□□ 2.25
SNF8-213ENST00000514929 FARP2O94887 1054 aaPredicted RBP29.08■■■□□ 2.25
SNF8-213ENST00000514929 NDUFB10O96000 172 aa29.08■■■□□ 2.25
SNF8-213ENST00000514929 ERCC3P19447 782 aa29.08■■■□□ 2.25
SNF8-213ENST00000514929 ZNF589Q86UQ0 364 aaPredicted RBP29.08■■■□□ 2.25
SNF8-213ENST00000514929 NCAPG2Q86XI2 1143 aa29.08■■■□□ 2.25
SNF8-213ENST00000514929 MKL1Q969V6 931 aa29.08■■■□□ 2.25
SNF8-213ENST00000514929 PPP1R9AQ9ULJ8 1098 aa29.08■■■□□ 2.25
SNF8-213ENST00000514929 CCDC171Q6TFL3 1326 aa29.08■■■□□ 2.25
SNF8-213ENST00000514929 MYH4Q9Y623 1939 aa29.08■■■□□ 2.25
SNF8-213ENST00000514929 STRNO43815 780 aa29.07■■■□□ 2.24
SNF8-213ENST00000514929 TMEM132BQ14DG7 1078 aa29.07■■■□□ 2.24
SNF8-213ENST00000514929 MAP3K21Q5TCX8 1036 aa29.07■■■□□ 2.24
SNF8-213ENST00000514929 MROH8Q9H579 483 aa29.07■■■□□ 2.24
SNF8-213ENST00000514929 ANAPC4Q9UJX5 808 aa29.07■■■□□ 2.24
SNF8-213ENST00000514929 ADAMTS5Q9UNA0 930 aa29.07■■■□□ 2.24
SNF8-213ENST00000514929 DDX52Q9Y2R4 599 aaKnown RBP eCLIP29.07■■■□□ 2.24
SNF8-213ENST00000514929 TSPY2A6NKD2 308 aa29.06■■■□□ 2.24
SNF8-213ENST00000514929 FGAP02671 866 aa29.06■■■□□ 2.24
SNF8-213ENST00000514929 HSPD1P10809 573 aaKnown RBP29.06■■■□□ 2.24
SNF8-213ENST00000514929 MFAP1P55081 439 aaKnown RBP29.06■■■□□ 2.24
SNF8-213ENST00000514929 LRRC47Q8N1G4 583 aaKnown RBP29.06■■■□□ 2.24
SNF8-213ENST00000514929 CRISPLD2Q9H0B8 497 aa29.06■■■□□ 2.24
SNF8-213ENST00000514929 INCENPQ9NQS7 918 aa29.06■■■□□ 2.24
SNF8-213ENST00000514929 SYNPO2Q9UMS6 1093 aa29.06■■■□□ 2.24
SNF8-213ENST00000514929 VWA5AO00534 786 aa29.05■■■□□ 2.24
SNF8-213ENST00000514929 HOXC6P09630 235 aa29.05■■■□□ 2.24
SNF8-213ENST00000514929 CACNB2Q08289 660 aaPredicted RBP29.05■■■□□ 2.24
SNF8-213ENST00000514929 UBE2Q1Q7Z7E8 422 aa29.05■■■□□ 2.24
SNF8-213ENST00000514929 DPP9Q86TI2 863 aa29.05■■■□□ 2.24
SNF8-213ENST00000514929 SLF1Q9BQI6 1058 aa29.05■■■□□ 2.24
SNF8-213ENST00000514929 DIAPH3Q9NSV4 1193 aa29.05■■■□□ 2.24
SNF8-213ENST00000514929 RANBP6O60518 1105 aaKnown RBP29.04■■■□□ 2.24
SNF8-213ENST00000514929 SLC25A27O95847 323 aa29.04■■■□□ 2.24
SNF8-213ENST00000514929 ADORA2AP29274 412 aa29.04■■■□□ 2.24
SNF8-213ENST00000514929 PPP4R3BQ5MIZ7 849 aa29.04■■■□□ 2.24
SNF8-213ENST00000514929 MFSD14CQ5VZR4 134 aa29.04■■■□□ 2.24
SNF8-213ENST00000514929 HIP1O00291 1037 aa29.03■■■□□ 2.24
SNF8-213ENST00000514929 GMCL1P1Q8NEA9 526 aa29.03■■■□□ 2.24
SNF8-213ENST00000514929 NPLOC4Q8TAT6 608 aa29.03■■■□□ 2.24
SNF8-213ENST00000514929 TOMM22Q9NS69 142 aa29.03■■■□□ 2.24
SNF8-213ENST00000514929 COL11A1P12107 1806 aaPredicted RBP29.03■■■□□ 2.24
SNF8-213ENST00000514929 ZMYM6O95789 1325 aa29.02■■■□□ 2.24
SNF8-213ENST00000514929 STAT3P40763 770 aa29.02■■■□□ 2.24
SNF8-213ENST00000514929 CWC27Q6UX04 472 aaKnown RBP29.02■■■□□ 2.24
SNF8-213ENST00000514929 PRPF38AQ8NAV1 312 aaKnown RBP29.02■■■□□ 2.24
SNF8-213ENST00000514929 HTATIP2Q9BUP3 242 aa29.02■■■□□ 2.24
SNF8-213ENST00000514929 FLRT1Q9NZU1 646 aa29.02■■■□□ 2.24
SNF8-213ENST00000514929 STX8Q9UNK0 236 aa29.02■■■□□ 2.24
SNF8-213ENST00000514929 ZNF236Q9UL36 1845 aa29.01■■■□□ 2.24
SNF8-213ENST00000514929 ORC4O43929 436 aa29.01■■■□□ 2.23
SNF8-213ENST00000514929 PDE4AP27815 886 aa29.01■■■□□ 2.23
SNF8-213ENST00000514929 SLFN13Q68D06 897 aa29.01■■■□□ 2.23
SNF8-213ENST00000514929 RIOX2Q8IUF8 465 aa29.01■■■□□ 2.23
SNF8-213ENST00000514929 DPF3Q92784 378 aa29.01■■■□□ 2.23
SNF8-213ENST00000514929 ZNF214Q9UL59 606 aaPredicted RBP29.01■■■□□ 2.23
SNF8-213ENST00000514929 ISY1Q9ULR0 285 aaKnown RBP29.01■■■□□ 2.23
SNF8-213ENST00000514929 TACC3Q9Y6A5 838 aa29.01■■■□□ 2.23
SNF8-213ENST00000514929 FCER1AP12319 257 aa29■■■□□ 2.23
SNF8-213ENST00000514929 CCND3P30281 292 aaPredicted RBP29■■■□□ 2.23
SNF8-213ENST00000514929 RRP12Q5JTH9 1297 aaKnown RBP29■■■□□ 2.23
SNF8-213ENST00000514929 ABRAQ8N0Z2 381 aa29■■■□□ 2.23
SNF8-213ENST00000514929 REPS2Q8NFH8 660 aa29■■■□□ 2.23
SNF8-213ENST00000514929 KIFC2Q96AC6 838 aa29■■■□□ 2.23
SNF8-213ENST00000514929 SLC5A4Q9NY91 659 aa29■■■□□ 2.23
SNF8-213ENST00000514929 CTDP1Q9Y5B0 961 aaPredicted RBP29■■■□□ 2.23
SNF8-213ENST00000514929 FGRP09769 529 aa28.99■■■□□ 2.23
SNF8-213ENST00000514929 BMP3P12645 472 aa28.99■■■□□ 2.23
SNF8-213ENST00000514929 COPB2P35606 906 aa28.99■■■□□ 2.23
SNF8-213ENST00000514929 HAND2P61296 217 aa28.99■■■□□ 2.23
SNF8-213ENST00000514929 ANKLE1Q8NAG6 615 aa28.99■■■□□ 2.23
SNF8-213ENST00000514929 IL17RBQ9NRM6 502 aa28.99■■■□□ 2.23
SNF8-213ENST00000514929 FEM1BQ9UK73 627 aa28.99■■■□□ 2.23
SNF8-213ENST00000514929 NMT2O60551 498 aa28.98■■■□□ 2.23
SNF8-213ENST00000514929 PAWRQ96IZ0 340 aaKnown RBP28.98■■■□□ 2.23
SNF8-213ENST00000514929 MMP19Q99542 508 aa28.98■■■□□ 2.23
SNF8-213ENST00000514929 COBLO75128 1261 aa28.97■■■□□ 2.23
SNF8-213ENST00000514929 ZBED4O75132 1171 aa28.97■■■□□ 2.23
SNF8-213ENST00000514929 CYP2C19P33261 490 aa28.97■■■□□ 2.23
SNF8-213ENST00000514929 TEX13BQ9BXU2 312 aa28.97■■■□□ 2.23
SNF8-213ENST00000514929 KCTD2Q14681 263 aa28.96■■■□□ 2.23
SNF8-213ENST00000514929 TTC22Q5TAA0 569 aa28.96■■■□□ 2.23
SNF8-213ENST00000514929 OLFML2BQ68BL8 750 aa28.96■■■□□ 2.23
SNF8-213ENST00000514929 SNRNP48Q6IEG0 339 aaKnown RBP28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms