RNA–Protein interactions for RNA: ENST00000514831.1

SMAD1-214, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-214ENST00000514831 MYCNP04198 464 aaPredicted RBP27.55■■■□□ 2
SMAD1-214ENST00000514831 C9orf50Q5SZB4 431 aa27.55■■■□□ 2
SMAD1-214ENST00000514831 C12orf60Q5U649 245 aa27.55■■■□□ 2
SMAD1-214ENST00000514831 COL25A1Q9BXS0 654 aaPredicted RBP27.55■■■□□ 2
SMAD1-214ENST00000514831 ADAMTS5Q9UNA0 930 aa27.55■■■□□ 2
SMAD1-214ENST00000514831 LAMA2P24043 3122 aaKnown RBP27.55■■■□□ 2
SMAD1-214ENST00000514831 APBB1O00213 710 aa27.54■■■□□ 2
SMAD1-214ENST00000514831 HMMRO75330 724 aa27.54■■■□□ 2
SMAD1-214ENST00000514831 CDK8P49336 464 aa27.54■■■□□ 2
SMAD1-214ENST00000514831 C16orf86Q6ZW13 317 aa27.54■■■□□ 2
SMAD1-214ENST00000514831 RPAP2Q8IXW5 612 aaPredicted RBP27.54■■■□□ 2
SMAD1-214ENST00000514831 BADQ92934 168 aa27.54■■■□□ 2
SMAD1-214ENST00000514831 PHF24Q9UPV7 400 aa27.54■■■□□ 2
SMAD1-214ENST00000514831 SLFNL1Q499Z3 407 aa27.53■■■□□ 2
SMAD1-214ENST00000514831 RIOX2Q8IUF8 465 aa27.53■■■□□ 2
SMAD1-214ENST00000514831 AMOTL1Q8IY63 956 aa27.53■■■□□ 2
SMAD1-214ENST00000514831 MMP19Q99542 508 aa27.53■■■□□ 2
SMAD1-214ENST00000514831 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.53■■■□□ 2
SMAD1-214ENST00000514831 ZBED9Q6R2W3 1325 aa27.52■■■□□ 2
SMAD1-214ENST00000514831 CYP2D7A0A087X1C5 515 aa27.52■■■□□ 2
SMAD1-214ENST00000514831 SMIM22K7EJ46 135 aa27.52■■■□□ 2
SMAD1-214ENST00000514831 SAMD1Q6SPF0 538 aaPredicted RBP27.52■■■□□ 2
SMAD1-214ENST00000514831 FERMT2Q96AC1 680 aa27.52■■■□□ 2
SMAD1-214ENST00000514831 XPNPEP3Q9NQH7 507 aa27.52■■■□□ 2
SMAD1-214ENST00000514831 TRIM43BA6NCK2 446 aa27.51■■□□□ 1.99
SMAD1-214ENST00000514831 RAB11FIP3O75154 756 aa27.51■■□□□ 1.99
SMAD1-214ENST00000514831 RARBP10826 455 aa27.51■■□□□ 1.99
SMAD1-214ENST00000514831 EEF2P13639 858 aaKnown RBP27.51■■□□□ 1.99
SMAD1-214ENST00000514831 SMAD3P84022 425 aaKnown RBP27.51■■□□□ 1.99
SMAD1-214ENST00000514831 SH3RF1Q7Z6J0 888 aa27.51■■□□□ 1.99
SMAD1-214ENST00000514831 TRIM43Q96BQ3 446 aaPredicted RBP27.51■■□□□ 1.99
SMAD1-214ENST00000514831 BOLA2Q9H3K6 86 aa27.51■■□□□ 1.99
SMAD1-214ENST00000514831 KANSL2Q9H9L4 492 aa27.51■■□□□ 1.99
SMAD1-214ENST00000514831 FBXO28Q9NVF7 368 aa27.51■■□□□ 1.99
SMAD1-214ENST00000514831 DIS3Q9Y2L1 958 aaKnown RBP27.51■■□□□ 1.99
SMAD1-214ENST00000514831 USP17L12C9JPN9 530 aa27.5■■□□□ 1.99
SMAD1-214ENST00000514831 USP17L21D6R901 530 aa27.5■■□□□ 1.99
SMAD1-214ENST00000514831 MS4A1P11836 297 aa27.5■■□□□ 1.99
SMAD1-214ENST00000514831 ATP5JP18859 108 aa27.5■■□□□ 1.99
SMAD1-214ENST00000514831 KCTD2Q14681 263 aa27.5■■□□□ 1.99
SMAD1-214ENST00000514831 SIRT2Q8IXJ6 389 aa27.5■■□□□ 1.99
SMAD1-214ENST00000514831 DDRGK1Q96HY6 314 aa27.5■■□□□ 1.99
SMAD1-214ENST00000514831 CDX2Q99626 313 aaPredicted RBP27.5■■□□□ 1.99
SMAD1-214ENST00000514831 TINF2Q9BSI4 451 aa27.5■■□□□ 1.99
SMAD1-214ENST00000514831 GOPCQ9HD26 462 aa27.5■■□□□ 1.99
SMAD1-214ENST00000514831 ZNF214Q9UL59 606 aaPredicted RBP27.5■■□□□ 1.99
SMAD1-214ENST00000514831 PPP1R9AQ9ULJ8 1098 aa27.5■■□□□ 1.99
SMAD1-214ENST00000514831 VWA5AO00534 786 aa27.49■■□□□ 1.99
SMAD1-214ENST00000514831 PGK2P07205 417 aa27.49■■□□□ 1.99
SMAD1-214ENST00000514831 COPB2P35606 906 aa27.49■■□□□ 1.99
SMAD1-214ENST00000514831 TLE2Q04725 743 aa27.49■■□□□ 1.99
SMAD1-214ENST00000514831 UBE3CQ15386 1083 aa27.49■■□□□ 1.99
SMAD1-214ENST00000514831 ZNF792Q3KQV3 632 aa27.49■■□□□ 1.99
SMAD1-214ENST00000514831 RNF180Q86T96 592 aa27.49■■□□□ 1.99
SMAD1-214ENST00000514831 HAUS7Q99871 368 aa27.49■■□□□ 1.99
SMAD1-214ENST00000514831 REPS2Q8NFH8 660 aa27.48■■□□□ 1.99
SMAD1-214ENST00000514831 SEMA6BQ9H3T3 888 aa27.48■■□□□ 1.99
SMAD1-214ENST00000514831 DDX19BQ9UMR2 479 aa27.48■■□□□ 1.99
SMAD1-214ENST00000514831 TACC3Q9Y6A5 838 aa27.48■■□□□ 1.99
SMAD1-214ENST00000514831 CLTBP09497 229 aa27.47■■□□□ 1.99
SMAD1-214ENST00000514831 STAT3P40763 770 aa27.47■■□□□ 1.99
SMAD1-214ENST00000514831 BCL11AQ9H165 835 aa27.47■■□□□ 1.99
SMAD1-214ENST00000514831 ZBTB40Q9NUA8 1239 aa27.47■■□□□ 1.99
SMAD1-214ENST00000514831 PGK1P00558 417 aa27.46■■□□□ 1.99
SMAD1-214ENST00000514831 CHGBP05060 677 aa27.46■■□□□ 1.99
SMAD1-214ENST00000514831 ZNF865P0CJ78 1059 aaPredicted RBP27.46■■□□□ 1.99
SMAD1-214ENST00000514831 AKR1A1P14550 325 aa27.46■■□□□ 1.99
SMAD1-214ENST00000514831 SLC4A4Q9Y6R1 1079 aa27.46■■□□□ 1.99
SMAD1-214ENST00000514831 A0A1W2PQ45 241 aaPredicted RBP27.45■■□□□ 1.98
SMAD1-214ENST00000514831 A0A1W2PQY0 241 aa27.45■■□□□ 1.98
SMAD1-214ENST00000514831 TAL1P17542 331 aaPredicted RBP27.45■■□□□ 1.98
SMAD1-214ENST00000514831 ITGB8P26012 769 aa27.45■■□□□ 1.98
SMAD1-214ENST00000514831 FAM83BQ5T0W9 1011 aa27.45■■□□□ 1.98
SMAD1-214ENST00000514831 CTR9Q6PD62 1173 aa27.45■■□□□ 1.98
SMAD1-214ENST00000514831 MAFAQ8NHW3 353 aaPredicted RBP27.45■■□□□ 1.98
SMAD1-214ENST00000514831 TTYH1Q9H313 450 aaPredicted RBP27.45■■□□□ 1.98
SMAD1-214ENST00000514831 ARPP21Q9UBL0 812 aaPredicted RBP27.45■■□□□ 1.98
SMAD1-214ENST00000514831 KIAA0355O15063 1070 aa27.44■■□□□ 1.98
SMAD1-214ENST00000514831 MSL3Q8N5Y2 521 aaKnown RBP27.44■■□□□ 1.98
SMAD1-214ENST00000514831 TMEM265A0A087WTH1 108 aa27.43■■□□□ 1.98
SMAD1-214ENST00000514831 ADAMTS4O75173 837 aa27.43■■□□□ 1.98
SMAD1-214ENST00000514831 ZSCAN25Q6NSZ9 544 aa27.43■■□□□ 1.98
SMAD1-214ENST00000514831 LENG1Q96BZ8 264 aaPredicted RBP27.43■■□□□ 1.98
SMAD1-214ENST00000514831 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.43■■□□□ 1.98
SMAD1-214ENST00000514831 CNPY2Q9Y2B0 182 aa27.43■■□□□ 1.98
SMAD1-214ENST00000514831 MYH4Q9Y623 1939 aa27.43■■□□□ 1.98
SMAD1-214ENST00000514831 CDH23Q9H251 3354 aa27.43■■□□□ 1.98
SMAD1-214ENST00000514831 RNPC3Q96LT9 517 aaKnown RBP27.42■■□□□ 1.98
SMAD1-214ENST00000514831 TSEN34Q9BSV6 310 aaKnown RBP27.42■■□□□ 1.98
SMAD1-214ENST00000514831 TEX13BQ9BXU2 312 aa27.42■■□□□ 1.98
SMAD1-214ENST00000514831 PUS7LQ9H0K6 701 aaKnown RBP27.42■■□□□ 1.98
SMAD1-214ENST00000514831 COG6Q9Y2V7 657 aa27.42■■□□□ 1.98
SMAD1-214ENST00000514831 EYSQ5T1H1 3165 aa27.42■■□□□ 1.98
SMAD1-214ENST00000514831 SYNGAP1Q96PV0 1343 aa27.41■■□□□ 1.98
SMAD1-214ENST00000514831 RAD21O60216 631 aa27.41■■□□□ 1.98
SMAD1-214ENST00000514831 PQBP1O60828 265 aaKnown RBP27.41■■□□□ 1.98
SMAD1-214ENST00000514831 RAG1P15918 1043 aa27.41■■□□□ 1.98
SMAD1-214ENST00000514831 MYLIPQ8WY64 445 aa27.41■■□□□ 1.98
SMAD1-214ENST00000514831 SLF1Q9BQI6 1058 aa27.41■■□□□ 1.98
SMAD1-214ENST00000514831 SYNRGQ9UMZ2 1314 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms