RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.62■■□□□ 1.53
SQSTM1-215ENST00000514093 AKR1B1P15121 316 aa24.62■■□□□ 1.53
SQSTM1-215ENST00000514093 FAAP100Q0VG06 881 aa24.62■■□□□ 1.53
SQSTM1-215ENST00000514093 TJAP1Q5JTD0 557 aa24.62■■□□□ 1.53
SQSTM1-215ENST00000514093 SLC9C2Q5TAH2 1124 aa24.62■■□□□ 1.53
SQSTM1-215ENST00000514093 ZKSCAN2Q63HK3 967 aa24.62■■□□□ 1.53
SQSTM1-215ENST00000514093 ARHGEF10LQ9HCE6 1279 aa24.62■■□□□ 1.53
SQSTM1-215ENST00000514093 DCP1AQ9NPI6 582 aaPredicted RBP24.62■■□□□ 1.53
SQSTM1-215ENST00000514093 ZNFX1Q9P2E3 1918 aaKnown RBP24.62■■□□□ 1.53
SQSTM1-215ENST00000514093 PDE6AP16499 860 aa24.61■■□□□ 1.53
SQSTM1-215ENST00000514093 PPM1EQ8WY54 764 aa24.61■■□□□ 1.53
SQSTM1-215ENST00000514093 ZNF576Q9H609 170 aa24.61■■□□□ 1.53
SQSTM1-215ENST00000514093 VCPKMTQ9H867 229 aa24.61■■□□□ 1.53
SQSTM1-215ENST00000514093 FBXO28Q9NVF7 368 aa24.61■■□□□ 1.53
SQSTM1-215ENST00000514093 TMX2Q9Y320 296 aa24.61■■□□□ 1.53
SQSTM1-215ENST00000514093 SLC25A27O95847 323 aa24.6■■□□□ 1.53
SQSTM1-215ENST00000514093 ZNF865P0CJ78 1059 aaPredicted RBP24.6■■□□□ 1.53
SQSTM1-215ENST00000514093 COL9A1P20849 921 aa24.6■■□□□ 1.53
SQSTM1-215ENST00000514093 ICA1Q05084 483 aa24.6■■□□□ 1.53
SQSTM1-215ENST00000514093 TMED8Q6PL24 325 aaPredicted RBP24.6■■□□□ 1.53
SQSTM1-215ENST00000514093 LCORLQ8N3X6 602 aa24.6■■□□□ 1.53
SQSTM1-215ENST00000514093 NRBP1Q9UHY1 535 aa24.6■■□□□ 1.53
SQSTM1-215ENST00000514093 EXOC6BQ9Y2D4 811 aa24.6■■□□□ 1.53
SQSTM1-215ENST00000514093 ZNF532Q9HCE3 1301 aa24.6■■□□□ 1.53
SQSTM1-215ENST00000514093 MUC3AQ02505 3323 aa24.59■■□□□ 1.53
SQSTM1-215ENST00000514093 SMIM22K7EJ46 135 aa24.59■■□□□ 1.53
SQSTM1-215ENST00000514093 TNFRSF10AO00220 468 aa24.59■■□□□ 1.53
SQSTM1-215ENST00000514093 ZNF792Q3KQV3 632 aa24.59■■□□□ 1.53
SQSTM1-215ENST00000514093 GRXCR1A8MXD5 290 aa24.58■■□□□ 1.53
SQSTM1-215ENST00000514093 WDR46O15213 610 aaKnown RBP24.58■■□□□ 1.53
SQSTM1-215ENST00000514093 ADAMTS4O75173 837 aa24.58■■□□□ 1.53
SQSTM1-215ENST00000514093 AKR1A1P14550 325 aa24.58■■□□□ 1.53
SQSTM1-215ENST00000514093 KCTD2Q14681 263 aa24.58■■□□□ 1.53
SQSTM1-215ENST00000514093 TIFAQ96CG3 184 aa24.58■■□□□ 1.53
SQSTM1-215ENST00000514093 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.58■■□□□ 1.531e-6■■■□□ 15.6
SQSTM1-215ENST00000514093 ARMT1Q9H993 441 aa24.58■■□□□ 1.53
SQSTM1-215ENST00000514093 STARD7Q9NQZ5 370 aa24.58■■□□□ 1.53
SQSTM1-215ENST00000514093 RAPGEFL1Q9UHV5 662 aa24.58■■□□□ 1.53
SQSTM1-215ENST00000514093 DCDC2CA8MYV0 355 aa24.57■■□□□ 1.52
SQSTM1-215ENST00000514093 PRKAB2O43741 272 aa24.57■■□□□ 1.52
SQSTM1-215ENST00000514093 PBX2P40425 430 aa24.57■■□□□ 1.52
SQSTM1-215ENST00000514093 STAT3P40763 770 aa24.57■■□□□ 1.52
SQSTM1-215ENST00000514093 ACLYP53396 1101 aa24.57■■□□□ 1.52
SQSTM1-215ENST00000514093 TTF1Q15361 905 aaPredicted RBP24.57■■□□□ 1.52
SQSTM1-215ENST00000514093 ANKRD33Q7Z3H0 272 aa24.57■■□□□ 1.52
SQSTM1-215ENST00000514093 RIOX2Q8IUF8 465 aa24.57■■□□□ 1.52
SQSTM1-215ENST00000514093 SH2D4AQ9H788 454 aa24.57■■□□□ 1.52
SQSTM1-215ENST00000514093 IL1RAPL2Q9NP60 686 aa24.57■■□□□ 1.52
SQSTM1-215ENST00000514093 SWAP70Q9UH65 585 aa24.57■■□□□ 1.52
SQSTM1-215ENST00000514093 ADAMTS5Q9UNA0 930 aa24.57■■□□□ 1.52
SQSTM1-215ENST00000514093 CYP2D7A0A087X1C5 515 aa24.56■■□□□ 1.52
SQSTM1-215ENST00000514093 TCRBV5S4A2TA0A5A2 114 aa24.56■■□□□ 1.52
SQSTM1-215ENST00000514093 RAD21O60216 631 aa24.56■■□□□ 1.52
SQSTM1-215ENST00000514093 SLFNL1Q499Z3 407 aa24.56■■□□□ 1.52
SQSTM1-215ENST00000514093 ITPRIPQ8IWB1 547 aa24.56■■□□□ 1.52
SQSTM1-215ENST00000514093 TOX2Q96NM4 488 aa24.56■■□□□ 1.52
SQSTM1-215ENST00000514093 DIS3Q9Y2L1 958 aaKnown RBP24.56■■□□□ 1.52
SQSTM1-215ENST00000514093 COL11A1P12107 1806 aaPredicted RBP24.56■■□□□ 1.52
SQSTM1-215ENST00000514093 GOLIM4O00461 696 aa24.55■■□□□ 1.52
SQSTM1-215ENST00000514093 TIMP1P01033 207 aa24.55■■□□□ 1.52
SQSTM1-215ENST00000514093 EEF2P13639 858 aaKnown RBP24.55■■□□□ 1.52
SQSTM1-215ENST00000514093 IRX5P78411 483 aaPredicted RBP24.55■■□□□ 1.52
SQSTM1-215ENST00000514093 KCNA10Q16322 511 aa24.55■■□□□ 1.52
SQSTM1-215ENST00000514093 C16orf59Q7L2K0 433 aa24.55■■□□□ 1.52
SQSTM1-215ENST00000514093 DNAJC2Q99543 621 aaKnown RBP24.55■■□□□ 1.52
SQSTM1-215ENST00000514093 TSEN34Q9BSV6 310 aaKnown RBP24.55■■□□□ 1.52
SQSTM1-215ENST00000514093 BCL11AQ9H165 835 aa24.55■■□□□ 1.52
SQSTM1-215ENST00000514093 CNPY2Q9Y2B0 182 aa24.55■■□□□ 1.52
SQSTM1-215ENST00000514093 PARP14Q460N5 1801 aa24.55■■□□□ 1.52
SQSTM1-215ENST00000514093 SYNRGQ9UMZ2 1314 aa24.55■■□□□ 1.52
SQSTM1-215ENST00000514093 PLXNA1Q9UIW2 1896 aa24.54■■□□□ 1.52
SQSTM1-215ENST00000514093 VWA5AO00534 786 aa24.54■■□□□ 1.52
SQSTM1-215ENST00000514093 CCDC129Q6ZRS4 1044 aa24.54■■□□□ 1.52
SQSTM1-215ENST00000514093 NUP133Q8WUM0 1156 aa24.54■■□□□ 1.52
SQSTM1-215ENST00000514093 ZNF214Q9UL59 606 aaPredicted RBP24.54■■□□□ 1.52
SQSTM1-215ENST00000514093 MYADML2A6NDP7 307 aa24.53■■□□□ 1.52
SQSTM1-215ENST00000514093 RLBP1P12271 317 aa24.53■■□□□ 1.52
SQSTM1-215ENST00000514093 CDK8P49336 464 aa24.53■■□□□ 1.52
SQSTM1-215ENST00000514093 CEP85Q6P2H3 762 aa24.53■■□□□ 1.52
SQSTM1-215ENST00000514093 FTSJ3Q8IY81 847 aaKnown RBP24.53■■□□□ 1.52
SQSTM1-215ENST00000514093 KLHDC9Q8NEP7 349 aa24.53■■□□□ 1.52
SQSTM1-215ENST00000514093 GAS2L1Q99501 681 aaPredicted RBP24.53■■□□□ 1.52
SQSTM1-215ENST00000514093 PBX4Q9BYU1 374 aa24.53■■□□□ 1.52
SQSTM1-215ENST00000514093 PRDM12Q9H4Q4 367 aa24.53■■□□□ 1.52
SQSTM1-215ENST00000514093 TBX21Q9UL17 535 aa24.53■■□□□ 1.52
SQSTM1-215ENST00000514093 ROBO3Q96MS0 1386 aa24.53■■□□□ 1.52
SQSTM1-215ENST00000514093 SNAI1O95863 264 aaPredicted RBP24.52■■□□□ 1.52
SQSTM1-215ENST00000514093 FAM83BQ5T0W9 1011 aa24.52■■□□□ 1.52
SQSTM1-215ENST00000514093 MFSD5Q6N075 450 aa24.52■■□□□ 1.52
SQSTM1-215ENST00000514093 ERC1Q8IUD2 1116 aa24.52■■□□□ 1.52
SQSTM1-215ENST00000514093 REPS2Q8NFH8 660 aa24.52■■□□□ 1.52
SQSTM1-215ENST00000514093 ZHX1Q9UKY1 873 aaPredicted RBP24.52■■□□□ 1.52
SQSTM1-215ENST00000514093 FAM184BQ9ULE4 1060 aa24.52■■□□□ 1.52
SQSTM1-215ENST00000514093 PPP1R9AQ9ULJ8 1098 aa24.52■■□□□ 1.52
SQSTM1-215ENST00000514093 MBD4O95243 580 aa24.51■■□□□ 1.51
SQSTM1-215ENST00000514093 ACRP10323 421 aa24.51■■□□□ 1.51
SQSTM1-215ENST00000514093 CCDC85BQ15834 202 aaPredicted RBP24.51■■□□□ 1.51
SQSTM1-215ENST00000514093 TMEM240Q5SV17 173 aa24.51■■□□□ 1.51
SQSTM1-215ENST00000514093 CCSAPQ6IQ19 270 aaPredicted RBP24.51■■□□□ 1.51
SQSTM1-215ENST00000514093 CCDC17Q96LX7 622 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms