RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 RGS20O76081 388 aa11.47□□□□□ -0.57
TPM3-221ENST00000513769 DEXIO95424 95 aa11.47□□□□□ -0.57
TPM3-221ENST00000513769 FMNL1O95466 1100 aaPredicted RBP11.47□□□□□ -0.57
TPM3-221ENST00000513769 CYP2D6P10635 497 aa11.47□□□□□ -0.57
TPM3-221ENST00000513769 NCLP19338 710 aaKnown RBP11.47□□□□□ -0.57
TPM3-221ENST00000513769 ZNF280AP59817 542 aaPredicted RBP11.47□□□□□ -0.57
TPM3-221ENST00000513769 RCSD1Q6JBY9 416 aa11.47□□□□□ -0.57
TPM3-221ENST00000513769 TATDN1Q6P1N9 297 aa11.47□□□□□ -0.57
TPM3-221ENST00000513769 TMEM87AQ8NBN3 555 aa11.47□□□□□ -0.57
TPM3-221ENST00000513769 CTCFLQ8NI51 663 aaPredicted RBP11.47□□□□□ -0.57
TPM3-221ENST00000513769 FAM151AQ8WW52 585 aa11.47□□□□□ -0.57
TPM3-221ENST00000513769 MKL1Q969V6 931 aa11.47□□□□□ -0.57
TPM3-221ENST00000513769 ZBED3Q96IU2 234 aaPredicted RBP11.47□□□□□ -0.57
TPM3-221ENST00000513769 ZKSCAN3Q9BRR0 538 aa11.47□□□□□ -0.57
TPM3-221ENST00000513769 HERC5Q9UII4 1024 aaKnown RBP11.47□□□□□ -0.57
TPM3-221ENST00000513769 SYNPO2Q9UMS6 1093 aa11.47□□□□□ -0.57
TPM3-221ENST00000513769 COL2A1P02458 1487 aaPredicted RBP11.46□□□□□ -0.57
TPM3-221ENST00000513769 ATRNL1Q5VV63 1379 aa11.46□□□□□ -0.57
TPM3-221ENST00000513769 NFKBIEO00221 500 aa11.46□□□□□ -0.57
TPM3-221ENST00000513769 TRAK2O60296 914 aa11.46□□□□□ -0.57
TPM3-221ENST00000513769 TOP1P11387 765 aaKnown RBP11.46□□□□□ -0.57
TPM3-221ENST00000513769 CDC27P30260 824 aa11.46□□□□□ -0.57
TPM3-221ENST00000513769 AKAP17AQ02040 695 aaKnown RBP11.46□□□□□ -0.57
TPM3-221ENST00000513769 MAP3K10Q02779 954 aa11.46□□□□□ -0.57
TPM3-221ENST00000513769 FAM47AQ5JRC9 791 aa11.46□□□□□ -0.57
TPM3-221ENST00000513769 BRAPQ7Z569 592 aa11.46□□□□□ -0.57
TPM3-221ENST00000513769 NKX2-3Q8TAU0 364 aa11.46□□□□□ -0.57
TPM3-221ENST00000513769 DYNLL2Q96FJ2 89 aa11.46□□□□□ -0.57
TPM3-221ENST00000513769 C8orf76Q96K31 380 aa11.46□□□□□ -0.57
TPM3-221ENST00000513769 NCOA5Q9HCD5 579 aaKnown RBP11.46□□□□□ -0.57
TPM3-221ENST00000513769 DDX4Q9NQI0 724 aaKnown RBP11.46□□□□□ -0.57
TPM3-221ENST00000513769 SAP30BPQ9UHR5 308 aaKnown RBP11.46□□□□□ -0.57
TPM3-221ENST00000513769 BAZ2AQ9UIF9 1905 aaKnown RBP11.46□□□□□ -0.58
TPM3-221ENST00000513769 FER1L6Q2WGJ9 1857 aa11.46□□□□□ -0.58
TPM3-221ENST00000513769 JAK2O60674 1132 aa11.45□□□□□ -0.58
TPM3-221ENST00000513769 LMNB1P20700 586 aa11.45□□□□□ -0.58
TPM3-221ENST00000513769 TNNI2P48788 182 aa11.45□□□□□ -0.58
TPM3-221ENST00000513769 KRT85P78386 507 aa11.45□□□□□ -0.58
TPM3-221ENST00000513769 PICALMQ13492 652 aa11.45□□□□□ -0.58
TPM3-221ENST00000513769 TNFAIP1Q13829 316 aa11.45□□□□□ -0.58
TPM3-221ENST00000513769 TRIM29Q14134 588 aa11.45□□□□□ -0.58
TPM3-221ENST00000513769 C9orf131Q5VYM1 1079 aa11.45□□□□□ -0.58
TPM3-221ENST00000513769 MCTP1Q6DN14 999 aa11.45□□□□□ -0.58
TPM3-221ENST00000513769 NBPF11Q86T75 865 aa11.45□□□□□ -0.58
TPM3-221ENST00000513769 MICU3Q86XE3 530 aa11.45□□□□□ -0.58
TPM3-221ENST00000513769 STK11IPQ8N1F8 1099 aa11.45□□□□□ -0.58
TPM3-221ENST00000513769 RBM46Q8TBY0 533 aaKnown RBP11.45□□□□□ -0.58
TPM3-221ENST00000513769 DDX11Q96FC9 970 aa11.45□□□□□ -0.58
TPM3-221ENST00000513769 ZNF396Q96N95 335 aaPredicted RBP11.45□□□□□ -0.58
TPM3-221ENST00000513769 TDRD3Q9H7E2 651 aaKnown RBP11.45□□□□□ -0.58
TPM3-221ENST00000513769 KANSL2Q9H9L4 492 aa11.45□□□□□ -0.58
TPM3-221ENST00000513769 SENP2Q9HC62 589 aa11.45□□□□□ -0.58
TPM3-221ENST00000513769 GINM1Q9NU53 330 aa11.45□□□□□ -0.58
TPM3-221ENST00000513769 LMBRD1Q9NUN5 540 aa11.45□□□□□ -0.58
TPM3-221ENST00000513769 MTMR4Q9NYA4 1195 aa11.45□□□□□ -0.58
TPM3-221ENST00000513769 ZNF70Q9UC06 446 aaPredicted RBP11.45□□□□□ -0.58
TPM3-221ENST00000513769 PSME4Q14997 1843 aa11.44□□□□□ -0.58
TPM3-221ENST00000513769 PLIN4Q96Q06 1357 aa11.44□□□□□ -0.58
TPM3-221ENST00000513769 ELP1O95163 1332 aa11.44□□□□□ -0.58
TPM3-221ENST00000513769 IGKV6D-41A0A0C4DH26 115 aa11.44□□□□□ -0.58
TPM3-221ENST00000513769 VPS37CA5D8V6 355 aaPredicted RBP11.44□□□□□ -0.58
TPM3-221ENST00000513769 PALM3A6NDB9 673 aaPredicted RBP11.44□□□□□ -0.58
TPM3-221ENST00000513769 H7C1D1 291 aa11.44□□□□□ -0.58
TPM3-221ENST00000513769 SMIM22K7EJ46 135 aa11.44□□□□□ -0.58
TPM3-221ENST00000513769 PRPF40AO75400 957 aaKnown RBP11.44□□□□□ -0.58
TPM3-221ENST00000513769 TTLL1O95922 423 aa11.44□□□□□ -0.58
TPM3-221ENST00000513769 MBD3O95983 291 aa11.44□□□□□ -0.58
TPM3-221ENST00000513769 KLHL40Q2TBA0 621 aa11.44□□□□□ -0.58
TPM3-221ENST00000513769 CERKLQ49MI3 558 aaPredicted RBP11.44□□□□□ -0.58
TPM3-221ENST00000513769 PNMA1Q8ND90 353 aa11.44□□□□□ -0.58
TPM3-221ENST00000513769 NUP133Q8WUM0 1156 aa11.44□□□□□ -0.58
TPM3-221ENST00000513769 HOOK2Q96ED9 719 aa11.44□□□□□ -0.58
TPM3-221ENST00000513769 TMEM47Q9BQJ4 181 aa11.44□□□□□ -0.58
TPM3-221ENST00000513769 TRIM34Q9BYJ4 488 aa11.44□□□□□ -0.58
TPM3-221ENST00000513769 MYOZ2Q9NPC6 264 aa11.44□□□□□ -0.58
TPM3-221ENST00000513769 SH3GLB2Q9NR46 395 aa11.44□□□□□ -0.58
TPM3-221ENST00000513769 NYAP2Q9P242 653 aa11.44□□□□□ -0.58
TPM3-221ENST00000513769 BRCA1P38398 1863 aaKnown RBP11.44□□□□□ -0.58
TPM3-221ENST00000513769 SCN9AQ15858 1988 aa11.43□□□□□ -0.58
TPM3-221ENST00000513769 U2AF2P26368 475 aaKnown RBP eCLIP11.43□□□□□ -0.58
TPM3-221ENST00000513769 FUT2Q10981 343 aa11.43□□□□□ -0.58
TPM3-221ENST00000513769 NFIAQ12857 509 aa11.43□□□□□ -0.58
TPM3-221ENST00000513769 PTGDRQ13258 359 aa11.43□□□□□ -0.58
TPM3-221ENST00000513769 SAFBQ15424 915 aaKnown RBP eCLIP11.43□□□□□ -0.58
TPM3-221ENST00000513769 GALNT17Q6IS24 598 aa11.43□□□□□ -0.58
TPM3-221ENST00000513769 ZSCAN29Q8IWY8 852 aaPredicted RBP11.43□□□□□ -0.58
TPM3-221ENST00000513769 ALG1Q9BT22 464 aa11.43□□□□□ -0.58
TPM3-221ENST00000513769 CABP5Q9NP86 173 aa11.43□□□□□ -0.58
TPM3-221ENST00000513769 CNOT7Q9UIV1 285 aaKnown RBP11.43□□□□□ -0.58
TPM3-221ENST00000513769 RCOR1Q9UKL0 485 aa11.43□□□□□ -0.58
TPM3-221ENST00000513769 FOCADQ5VW36 1801 aa11.43□□□□□ -0.58
TPM3-221ENST00000513769 MYH1P12882 1939 aa11.43□□□□□ -0.58
TPM3-221ENST00000513769 DDTLA6NHG4 134 aaPredicted RBP11.42□□□□□ -0.58
TPM3-221ENST00000513769 WNT10BO00744 389 aa11.42□□□□□ -0.58
TPM3-221ENST00000513769 PRKCSHP14314 528 aaPredicted RBP11.42□□□□□ -0.58
TPM3-221ENST00000513769 SHMT1P34896 483 aa11.42□□□□□ -0.58
TPM3-221ENST00000513769 HTRA3P83110 453 aa11.42□□□□□ -0.58
TPM3-221ENST00000513769 FSTL1Q12841 308 aa11.42□□□□□ -0.58
TPM3-221ENST00000513769 GRM4Q14833 912 aa11.42□□□□□ -0.58
TPM3-221ENST00000513769 TMEM179Q6ZVK1 233 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms