RNA–Protein interactions for RNA: ENST00000513677.5

GYPB-215, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 221 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-215ENST00000513677 EFCC1Q9HA90 598 aa7.38□□□□□ -1.23
GYPB-215ENST00000513677 IFT57Q9NWB7 429 aa7.38□□□□□ -1.23
GYPB-215ENST00000513677 LEMD3Q9Y2U8 911 aa7.38□□□□□ -1.23
GYPB-215ENST00000513677 ECM29Q5VYK3 1845 aa7.38□□□□□ -1.23
GYPB-215ENST00000513677 SSC5DA1L4H1 1573 aa7.37□□□□□ -1.23
GYPB-215ENST00000513677 NEURL1BA8MQ27 555 aa7.37□□□□□ -1.23
GYPB-215ENST00000513677 ZNF853P0CG23 659 aa7.37□□□□□ -1.23
GYPB-215ENST00000513677 IREB2P48200 963 aaKnown RBP7.37□□□□□ -1.23
GYPB-215ENST00000513677 INHBEP58166 350 aa7.37□□□□□ -1.23
GYPB-215ENST00000513677 CALD1Q05682 793 aaKnown RBP7.37□□□□□ -1.23
GYPB-215ENST00000513677 CHRNDQ07001 517 aa7.37□□□□□ -1.23
GYPB-215ENST00000513677 GAS6Q14393 721 aa7.37□□□□□ -1.23
GYPB-215ENST00000513677 SLC4A8Q2Y0W8 1093 aa7.37□□□□□ -1.23
GYPB-215ENST00000513677 NOM1Q5C9Z4 860 aaKnown RBP7.37□□□□□ -1.23
GYPB-215ENST00000513677 INTS3Q68E01 1043 aaKnown RBP7.37□□□□□ -1.23
GYPB-215ENST00000513677 OTUD7BQ6GQQ9 843 aa7.37□□□□□ -1.23
GYPB-215ENST00000513677 G2E3Q7L622 706 aa7.37□□□□□ -1.23
GYPB-215ENST00000513677 ALDH16A1Q8IZ83 802 aa7.37□□□□□ -1.23
GYPB-215ENST00000513677 CERS5Q8N5B7 392 aa7.37□□□□□ -1.23
GYPB-215ENST00000513677 CD209Q9NNX6 404 aa7.37□□□□□ -1.23
GYPB-215ENST00000513677 PTPN22Q9Y2R2 807 aa7.37□□□□□ -1.23
GYPB-215ENST00000513677 AOX1Q06278 1338 aa7.36□□□□□ -1.23
GYPB-215ENST00000513677 ANKRD18BA2A2Z9 1011 aa7.36□□□□□ -1.23
GYPB-215ENST00000513677 ZBTB48P10074 688 aaPredicted RBP7.36□□□□□ -1.23
GYPB-215ENST00000513677 SP3Q02447 781 aa7.36□□□□□ -1.23
GYPB-215ENST00000513677 FKBP5Q13451 457 aaPredicted RBP7.36□□□□□ -1.23
GYPB-215ENST00000513677 SUPT20HL1Q3ZLR7 823 aa7.36□□□□□ -1.23
GYPB-215ENST00000513677 SLC9C1Q4G0N8 1177 aa7.36□□□□□ -1.23
GYPB-215ENST00000513677 TAF7LQ5H9L4 462 aa7.36□□□□□ -1.23
GYPB-215ENST00000513677 ZNF804AQ7Z570 1209 aa7.36□□□□□ -1.23
GYPB-215ENST00000513677 NLRP8Q86W28 1048 aa7.36□□□□□ -1.23
GYPB-215ENST00000513677 OPTNQ96CV9 577 aa7.36□□□□□ -1.23
GYPB-215ENST00000513677 ABHD17AQ96GS6 310 aa7.36□□□□□ -1.23
GYPB-215ENST00000513677 PRMT6Q96LA8 375 aaPredicted RBP7.36□□□□□ -1.23
GYPB-215ENST00000513677 CFHR5Q9BXR6 569 aa7.36□□□□□ -1.23
GYPB-215ENST00000513677 ZCCHC2Q9C0B9 1178 aaKnown RBP7.36□□□□□ -1.23
GYPB-215ENST00000513677 OTOFQ9HC10 1997 aa7.36□□□□□ -1.23
GYPB-215ENST00000513677 COL1A1P02452 1464 aaPredicted RBP7.36□□□□□ -1.23
GYPB-215ENST00000513677 TCP10L2B9ZVM9 353 aa7.35□□□□□ -1.23
GYPB-215ENST00000513677 USP2O75604 605 aaPredicted RBP7.35□□□□□ -1.23
GYPB-215ENST00000513677 CAP1Q01518 475 aa7.35□□□□□ -1.23
GYPB-215ENST00000513677 RASA3Q14644 834 aa7.35□□□□□ -1.23
GYPB-215ENST00000513677 TAF1CQ15572 869 aaPredicted RBP7.35□□□□□ -1.23
GYPB-215ENST00000513677 OCLNQ16625 522 aa7.35□□□□□ -1.23
GYPB-215ENST00000513677 C1orf53Q5VUE5 145 aa7.35□□□□□ -1.23
GYPB-215ENST00000513677 FIGNL1Q6PIW4 674 aa7.35□□□□□ -1.23
GYPB-215ENST00000513677 LRRC69Q6ZNQ3 347 aa7.35□□□□□ -1.23
GYPB-215ENST00000513677 ANKRD13AQ8IZ07 590 aa7.35□□□□□ -1.23
GYPB-215ENST00000513677 SH3TC2Q8TF17 1288 aa7.35□□□□□ -1.23
GYPB-215ENST00000513677 CLP1Q92989 425 aaKnown RBP7.35□□□□□ -1.23
GYPB-215ENST00000513677 VTI1AQ96AJ9 217 aa7.35□□□□□ -1.23
GYPB-215ENST00000513677 ZBED3Q96IU2 234 aaPredicted RBP7.35□□□□□ -1.23
GYPB-215ENST00000513677 PTPN18Q99952 460 aa7.35□□□□□ -1.23
GYPB-215ENST00000513677 TDRD3Q9H7E2 651 aaKnown RBP7.35□□□□□ -1.23
GYPB-215ENST00000513677 NEUROD4Q9HD90 331 aa7.35□□□□□ -1.23
GYPB-215ENST00000513677 PPP2R3BQ9Y5P8 575 aa7.35□□□□□ -1.23
GYPB-215ENST00000513677 PTCH2Q9Y6C5 1203 aa7.35□□□□□ -1.23
GYPB-215ENST00000513677 ZSWIM8A7E2V4 1837 aa7.35□□□□□ -1.23
GYPB-215ENST00000513677 A0A1B0GUL6 1792 aa7.35□□□□□ -1.23
GYPB-215ENST00000513677 RBBP6Q7Z6E9 1792 aaKnown RBP7.35□□□□□ -1.23
GYPB-215ENST00000513677 CCL15-CCL14A0A0B4J2E2 113 aa7.34□□□□□ -1.23
GYPB-215ENST00000513677 DCDC2BA2VCK2 349 aa7.34□□□□□ -1.23
GYPB-215ENST00000513677 BNIP3LO60238 219 aa7.34□□□□□ -1.23
GYPB-215ENST00000513677 MMP14P50281 582 aa7.34□□□□□ -1.23
GYPB-215ENST00000513677 FXR1P51114 621 aaKnown RBP eCLIP7.34□□□□□ -1.23
GYPB-215ENST00000513677 IFIT5Q13325 482 aaKnown RBP7.34□□□□□ -1.23
GYPB-215ENST00000513677 GCKRQ14397 625 aa7.34□□□□□ -1.23
GYPB-215ENST00000513677 CCL15Q16663 113 aa7.34□□□□□ -1.23
GYPB-215ENST00000513677 TWISTNBQ3B726 338 aaPredicted RBP7.34□□□□□ -1.23
GYPB-215ENST00000513677 HSH2DQ96JZ2 352 aa7.34□□□□□ -1.23
GYPB-215ENST00000513677 CHMP4AQ9BY43 222 aa7.34□□□□□ -1.23
GYPB-215ENST00000513677 MYH16Q9H6N6 1097 aa7.34□□□□□ -1.23
GYPB-215ENST00000513677 NDFIP2Q9NV92 336 aa7.34□□□□□ -1.23
GYPB-215ENST00000513677 PHF24Q9UPV7 400 aa7.34□□□□□ -1.23
GYPB-215ENST00000513677 GPC6Q9Y625 555 aaPredicted RBP7.34□□□□□ -1.23
GYPB-215ENST00000513677 CARNS1A5YM72 827 aa7.33□□□□□ -1.24
GYPB-215ENST00000513677 H0YGN5 161 aa7.33□□□□□ -1.24
GYPB-215ENST00000513677 ATXN7O15265 892 aaPredicted RBP7.33□□□□□ -1.24
GYPB-215ENST00000513677 MX2P20592 715 aa7.33□□□□□ -1.24
GYPB-215ENST00000513677 CACNB3P54284 484 aa7.33□□□□□ -1.24
GYPB-215ENST00000513677 CHAF1AQ13111 956 aaPredicted RBP7.33□□□□□ -1.24
GYPB-215ENST00000513677 MAP3K11Q16584 847 aa7.33□□□□□ -1.24
GYPB-215ENST00000513677 NBPF11Q86T75 865 aa7.33□□□□□ -1.24
GYPB-215ENST00000513677 DNAAF4Q8WXU2 420 aa7.33□□□□□ -1.24
GYPB-215ENST00000513677 BRI3BPQ8WY22 251 aa7.33□□□□□ -1.24
GYPB-215ENST00000513677 ARMC5Q96C12 935 aa7.33□□□□□ -1.24
GYPB-215ENST00000513677 MKNK1Q9BUB5 465 aa7.33□□□□□ -1.24
GYPB-215ENST00000513677 TMEM39BQ9GZU3 492 aa7.33□□□□□ -1.24
GYPB-215ENST00000513677 ZFYVE28Q9HCC9 887 aa7.33□□□□□ -1.24
GYPB-215ENST00000513677 CNNM1Q9NRU3 951 aa7.33□□□□□ -1.24
GYPB-215ENST00000513677 CXXC1Q9P0U4 656 aaPredicted RBP7.33□□□□□ -1.24
GYPB-215ENST00000513677 ZNF70Q9UC06 446 aaPredicted RBP7.33□□□□□ -1.24
GYPB-215ENST00000513677 ATXN7L1Q9ULK2 861 aaPredicted RBP7.33□□□□□ -1.24
GYPB-215ENST00000513677 TTF2Q9UNY4 1162 aaKnown RBP7.33□□□□□ -1.24
GYPB-215ENST00000513677 PCDHGC4Q9Y5F7 938 aa7.33□□□□□ -1.24
GYPB-215ENST00000513677 CSADQ9Y600 493 aa7.33□□□□□ -1.24
GYPB-215ENST00000513677 LAMB1P07942 1786 aa7.33□□□□□ -1.24
GYPB-215ENST00000513677 HTTP42858 3142 aa7.32□□□□□ -1.24
GYPB-215ENST00000513677 F6X3S4 739 aa7.32□□□□□ -1.24
GYPB-215ENST00000513677 KHNYNO15037 678 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms