RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 NCAPG2Q86XI2 1143 aa11.67□□□□□ -0.54
TCOF1-212ENST00000513538 ERC1Q8IUD2 1116 aa11.67□□□□□ -0.54
TCOF1-212ENST00000513538 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.67□□□□□ -0.54
TCOF1-212ENST00000513538 LENG1Q96BZ8 264 aaPredicted RBP11.67□□□□□ -0.54
TCOF1-212ENST00000513538 SEMA6BQ9H3T3 888 aa11.67□□□□□ -0.54
TCOF1-212ENST00000513538 MROH8Q9H579 483 aa11.67□□□□□ -0.54
TCOF1-212ENST00000513538 VCPKMTQ9H867 229 aa11.67□□□□□ -0.54
TCOF1-212ENST00000513538 ADAMTS5Q9UNA0 930 aa11.67□□□□□ -0.54
TCOF1-212ENST00000513538 TMX2Q9Y320 296 aa11.67□□□□□ -0.54
TCOF1-212ENST00000513538 MCM3APO60318 1980 aa11.67□□□□□ -0.54
TCOF1-212ENST00000513538 APBB1O00213 710 aa11.66□□□□□ -0.54
TCOF1-212ENST00000513538 WDR46O15213 610 aaKnown RBP11.66□□□□□ -0.54
TCOF1-212ENST00000513538 PGK2P07205 417 aa11.66□□□□□ -0.54
TCOF1-212ENST00000513538 TAL1P17542 331 aaPredicted RBP11.66□□□□□ -0.54
TCOF1-212ENST00000513538 TLE2Q04725 743 aa11.66□□□□□ -0.54
TCOF1-212ENST00000513538 C12orf60Q5U649 245 aa11.66□□□□□ -0.54
TCOF1-212ENST00000513538 SIRT2Q8IXJ6 389 aa11.66□□□□□ -0.54
TCOF1-212ENST00000513538 ABRAQ8N0Z2 381 aa11.66□□□□□ -0.54
TCOF1-212ENST00000513538 MB21D1Q8N884 522 aa11.66□□□□□ -0.54
TCOF1-212ENST00000513538 REPS2Q8NFH8 660 aa11.66□□□□□ -0.54
TCOF1-212ENST00000513538 SWAP70Q9UH65 585 aa11.66□□□□□ -0.54
TCOF1-212ENST00000513538 PHF24Q9UPV7 400 aa11.66□□□□□ -0.54
TCOF1-212ENST00000513538 ROBO3Q96MS0 1386 aa11.66□□□□□ -0.54
TCOF1-212ENST00000513538 ADD2P35612 726 aa11.65□□□□□ -0.54
TCOF1-212ENST00000513538 CDK8P49336 464 aa11.65□□□□□ -0.54
TCOF1-212ENST00000513538 ZNF792Q3KQV3 632 aa11.65□□□□□ -0.54
TCOF1-212ENST00000513538 C1orf53Q5VUE5 145 aa11.65□□□□□ -0.54
TCOF1-212ENST00000513538 RIOX2Q8IUF8 465 aa11.65□□□□□ -0.54
TCOF1-212ENST00000513538 MYLIPQ8WY64 445 aa11.65□□□□□ -0.54
TCOF1-212ENST00000513538 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.65□□□□□ -0.54
TCOF1-212ENST00000513538 FOXD4L1Q9NU39 408 aa11.65□□□□□ -0.54
TCOF1-212ENST00000513538 ZBED9Q6R2W3 1325 aa11.64□□□□□ -0.55
TCOF1-212ENST00000513538 CDH23Q9H251 3354 aa11.64□□□□□ -0.55
TCOF1-212ENST00000513538 USP17L12C9JPN9 530 aa11.64□□□□□ -0.55
TCOF1-212ENST00000513538 USP17L21D6R901 530 aa11.64□□□□□ -0.55
TCOF1-212ENST00000513538 PGK1P00558 417 aa11.64□□□□□ -0.55
TCOF1-212ENST00000513538 ZNF865P0CJ78 1059 aaPredicted RBP11.64□□□□□ -0.55
TCOF1-212ENST00000513538 FCER1AP12319 257 aa11.64□□□□□ -0.55
TCOF1-212ENST00000513538 EEF2P13639 858 aaKnown RBP11.64□□□□□ -0.55
TCOF1-212ENST00000513538 HNRNPUQ00839 825 aaKnown RBP eCLIP11.64□□□□□ -0.55
TCOF1-212ENST00000513538 C16orf86Q6ZW13 317 aa11.64□□□□□ -0.55
TCOF1-212ENST00000513538 MAFAQ8NHW3 353 aaPredicted RBP11.64□□□□□ -0.55
TCOF1-212ENST00000513538 KIF1BPQ96EK5 621 aa11.64□□□□□ -0.55
TCOF1-212ENST00000513538 MMP19Q99542 508 aa11.64□□□□□ -0.55
TCOF1-212ENST00000513538 TINF2Q9BSI4 451 aa11.64□□□□□ -0.55
TCOF1-212ENST00000513538 BCL11AQ9H165 835 aa11.64□□□□□ -0.55
TCOF1-212ENST00000513538 BOLA2Q9H3K6 86 aa11.64□□□□□ -0.55
TCOF1-212ENST00000513538 ARHGEF10LQ9HCE6 1279 aa11.64□□□□□ -0.55
TCOF1-212ENST00000513538 XPNPEP3Q9NQH7 507 aa11.64□□□□□ -0.55
TCOF1-212ENST00000513538 PAG1Q9NWQ8 432 aa11.64□□□□□ -0.55
TCOF1-212ENST00000513538 ZNF214Q9UL59 606 aaPredicted RBP11.64□□□□□ -0.55
TCOF1-212ENST00000513538 MYH4Q9Y623 1939 aa11.64□□□□□ -0.55
TCOF1-212ENST00000513538 PRUNE2Q8WUY3 3088 aa11.63□□□□□ -0.55
TCOF1-212ENST00000513538 A0A1W2PQ45 241 aaPredicted RBP11.63□□□□□ -0.55
TCOF1-212ENST00000513538 A0A1W2PQY0 241 aa11.63□□□□□ -0.55
TCOF1-212ENST00000513538 VWA5AO00534 786 aa11.63□□□□□ -0.55
TCOF1-212ENST00000513538 ADAMTS4O75173 837 aa11.63□□□□□ -0.55
TCOF1-212ENST00000513538 SLC25A27O95847 323 aa11.63□□□□□ -0.55
TCOF1-212ENST00000513538 SMAD3P84022 425 aaKnown RBP11.63□□□□□ -0.55
TCOF1-212ENST00000513538 HSP90AB4PQ58FF6 505 aa11.63□□□□□ -0.55
TCOF1-212ENST00000513538 FAM83BQ5T0W9 1011 aa11.63□□□□□ -0.55
TCOF1-212ENST00000513538 MIER1Q8N108 512 aa11.63□□□□□ -0.55
TCOF1-212ENST00000513538 CLASRPQ8N2M8 674 aaKnown RBP11.63□□□□□ -0.55
TCOF1-212ENST00000513538 NUP88Q99567 741 aaPredicted RBP11.63□□□□□ -0.55
TCOF1-212ENST00000513538 SH2D4AQ9H788 454 aa11.63□□□□□ -0.55
TCOF1-212ENST00000513538 ATP8A2Q9NTI2 1148 aa11.63□□□□□ -0.55
TCOF1-212ENST00000513538 SLC5A4Q9NY91 659 aa11.63□□□□□ -0.55
TCOF1-212ENST00000513538 PPP1R9AQ9ULJ8 1098 aa11.63□□□□□ -0.55
TCOF1-212ENST00000513538 MYADML2A6NDP7 307 aa11.62□□□□□ -0.55
TCOF1-212ENST00000513538 KIAA0355O15063 1070 aa11.62□□□□□ -0.55
TCOF1-212ENST00000513538 ADCY6O43306 1168 aa11.62□□□□□ -0.55
TCOF1-212ENST00000513538 PQBP1O60828 265 aaKnown RBP11.62□□□□□ -0.55
TCOF1-212ENST00000513538 CLTBP09497 229 aa11.62□□□□□ -0.55
TCOF1-212ENST00000513538 IFIT2P09913 472 aaKnown RBP11.62□□□□□ -0.55
TCOF1-212ENST00000513538 RARBP10826 455 aa11.62□□□□□ -0.55
TCOF1-212ENST00000513538 STAT3P40763 770 aa11.62□□□□□ -0.55
TCOF1-212ENST00000513538 IRX5P78411 483 aaPredicted RBP11.62□□□□□ -0.55
TCOF1-212ENST00000513538 CTR9Q6PD62 1173 aa11.62□□□□□ -0.55
TCOF1-212ENST00000513538 CCDC17Q96LX7 622 aa11.62□□□□□ -0.55
TCOF1-212ENST00000513538 HAUS7Q99871 368 aa11.62□□□□□ -0.55
TCOF1-212ENST00000513538 NRBP1Q9UHY1 535 aa11.62□□□□□ -0.55
TCOF1-212ENST00000513538 DIS3Q9Y2L1 958 aaKnown RBP11.62□□□□□ -0.55
TCOF1-212ENST00000513538 RIPK3Q9Y572 518 aa11.62□□□□□ -0.55
TCOF1-212ENST00000513538 VCANP13611 3396 aa11.62□□□□□ -0.55
TCOF1-212ENST00000513538 SYNRGQ9UMZ2 1314 aa11.61□□□□□ -0.55
TCOF1-212ENST00000513538 SNAI1O95863 264 aaPredicted RBP11.61□□□□□ -0.55
TCOF1-212ENST00000513538 ATP5JP18859 108 aa11.61□□□□□ -0.55
TCOF1-212ENST00000513538 USP38Q8NB14 1042 aa11.61□□□□□ -0.55
TCOF1-212ENST00000513538 RNPC3Q96LT9 517 aaKnown RBP11.61□□□□□ -0.55
TCOF1-212ENST00000513538 PUS7LQ9H0K6 701 aaKnown RBP11.61□□□□□ -0.55
TCOF1-212ENST00000513538 KANSL2Q9H9L4 492 aa11.61□□□□□ -0.55
TCOF1-212ENST00000513538 ZBTB40Q9NUA8 1239 aa11.61□□□□□ -0.55
TCOF1-212ENST00000513538 TACC3Q9Y6A5 838 aa11.61□□□□□ -0.55
TCOF1-212ENST00000513538 LRRC37A2A6NM11 1700 aa11.6□□□□□ -0.55
TCOF1-212ENST00000513538 DNAJC25-GNG10A0A024R161 153 aa11.6□□□□□ -0.55
TCOF1-212ENST00000513538 AKR1A1P14550 325 aa11.6□□□□□ -0.55
TCOF1-212ENST00000513538 FOSL2P15408 326 aa11.6□□□□□ -0.55
TCOF1-212ENST00000513538 FAAP100Q0VG06 881 aa11.6□□□□□ -0.55
TCOF1-212ENST00000513538 KCTD2Q14681 263 aa11.6□□□□□ -0.55
TCOF1-212ENST00000513538 UBE3CQ15386 1083 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms