RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 LMTK2Q8IWU2 1503 aa5.74□□□□□ -1.49
PDLIM5-218ENST00000513341 FANCGO15287 622 aa5.74□□□□□ -1.49
PDLIM5-218ENST00000513341 ARNTP27540 789 aa5.74□□□□□ -1.49
PDLIM5-218ENST00000513341 ZNF252P-AS1Q0IIN9 211 aa5.74□□□□□ -1.49
PDLIM5-218ENST00000513341 CXorf38Q8TB03 319 aa5.74□□□□□ -1.49
PDLIM5-218ENST00000513341 EMILIN2Q9BXX0 1053 aa5.74□□□□□ -1.49
PDLIM5-218ENST00000513341 RTEL1Q9NZ71 1219 aa5.74□□□□□ -1.49
PDLIM5-218ENST00000513341 ST14Q9Y5Y6 855 aa5.74□□□□□ -1.49
PDLIM5-218ENST00000513341 PNPLA6Q8IY17 1366 aa5.74□□□□□ -1.49
PDLIM5-218ENST00000513341 NHSL1Q5SYE7 1610 aa5.74□□□□□ -1.49
PDLIM5-218ENST00000513341 ZFYVE9O95405 1425 aa5.74□□□□□ -1.49
PDLIM5-218ENST00000513341 XRCC5P13010 732 aaKnown RBP5.73□□□□□ -1.49
PDLIM5-218ENST00000513341 ZNF157P51786 506 aaPredicted RBP5.73□□□□□ -1.49
PDLIM5-218ENST00000513341 SULF2Q8IWU5 870 aa5.73□□□□□ -1.49
PDLIM5-218ENST00000513341 BAHD1Q8TBE0 780 aaPredicted RBP5.73□□□□□ -1.49
PDLIM5-218ENST00000513341 BORCS6Q96GS4 357 aa5.73□□□□□ -1.49
PDLIM5-218ENST00000513341 IRF2BPLQ9H1B7 796 aa5.73□□□□□ -1.49
PDLIM5-218ENST00000513341 ZCCHC4Q9H5U6 513 aa5.73□□□□□ -1.49
PDLIM5-218ENST00000513341 ADGRB3O60242 1522 aa5.73□□□□□ -1.49
PDLIM5-218ENST00000513341 ASXL1Q8IXJ9 1541 aa5.73□□□□□ -1.49
PDLIM5-218ENST00000513341 ATRNO75882 1429 aa5.73□□□□□ -1.49
PDLIM5-218ENST00000513341 MYOM3Q5VTT5 1437 aa5.73□□□□□ -1.49
PDLIM5-218ENST00000513341 RIMS2Q9UQ26 1411 aa5.73□□□□□ -1.49
PDLIM5-218ENST00000513341 HPXP02790 462 aa5.72□□□□□ -1.49
PDLIM5-218ENST00000513341 NME2P22392 152 aa5.72□□□□□ -1.49
PDLIM5-218ENST00000513341 NFIXQ14938 502 aa5.72□□□□□ -1.49
PDLIM5-218ENST00000513341 SCARA3Q6AZY7 606 aa5.72□□□□□ -1.49
PDLIM5-218ENST00000513341 MFSD4AQ8N468 514 aa5.72□□□□□ -1.49
PDLIM5-218ENST00000513341 CCDC74AQ96AQ1 378 aa5.72□□□□□ -1.49
PDLIM5-218ENST00000513341 KCNK12Q9HB15 430 aa5.72□□□□□ -1.49
PDLIM5-218ENST00000513341 MST1RQ04912 1400 aa5.72□□□□□ -1.49
PDLIM5-218ENST00000513341 ADAMTS13Q76LX8 1427 aa5.72□□□□□ -1.49
PDLIM5-218ENST00000513341 RPRD2Q5VT52 1461 aaKnown RBP5.71□□□□□ -1.49
PDLIM5-218ENST00000513341 KIF15Q9NS87 1388 aa5.71□□□□□ -1.5
PDLIM5-218ENST00000513341 FAM155AB1AL88 458 aaPredicted RBP5.71□□□□□ -1.5
PDLIM5-218ENST00000513341 PEX10O60683 326 aa5.71□□□□□ -1.5
PDLIM5-218ENST00000513341 SEMA7AO75326 666 aa5.71□□□□□ -1.5
PDLIM5-218ENST00000513341 LRIG2O94898 1065 aa5.71□□□□□ -1.5
PDLIM5-218ENST00000513341 YY1P25490 414 aa5.71□□□□□ -1.5
PDLIM5-218ENST00000513341 KRTAP10-2P60368 255 aa5.71□□□□□ -1.5
PDLIM5-218ENST00000513341 PDE3BQ13370 1112 aa5.71□□□□□ -1.5
PDLIM5-218ENST00000513341 ZBTB37Q5TC79 503 aa5.71□□□□□ -1.5
PDLIM5-218ENST00000513341 TTC6Q86TZ1 520 aa5.71□□□□□ -1.5
PDLIM5-218ENST00000513341 IRF2BP1Q8IU81 584 aa5.71□□□□□ -1.5
PDLIM5-218ENST00000513341 MARCH10Q8NA82 808 aaPredicted RBP5.71□□□□□ -1.5
PDLIM5-218ENST00000513341 GPBAR1Q8TDU6 330 aa5.71□□□□□ -1.5
PDLIM5-218ENST00000513341 MYLIPQ8WY64 445 aa5.71□□□□□ -1.5
PDLIM5-218ENST00000513341 COX4I2Q96KJ9 171 aa5.71□□□□□ -1.5
PDLIM5-218ENST00000513341 CITED4Q96RK1 184 aa5.71□□□□□ -1.5
PDLIM5-218ENST00000513341 FAM129BQ96TA1 746 aa5.71□□□□□ -1.5
PDLIM5-218ENST00000513341 CAPN6Q9Y6Q1 641 aa5.71□□□□□ -1.5
PDLIM5-218ENST00000513341 EP400Q96L91 3159 aa5.71□□□□□ -1.5
PDLIM5-218ENST00000513341 BCL9LQ86UU0 1499 aa5.71□□□□□ -1.5
PDLIM5-218ENST00000513341 ADAMTS20P59510 1910 aa5.7□□□□□ -1.5
PDLIM5-218ENST00000513341 BMP7P18075 431 aa5.7□□□□□ -1.5
PDLIM5-218ENST00000513341 CAP2P40123 477 aa5.7□□□□□ -1.5
PDLIM5-218ENST00000513341 GRM2Q14416 872 aa5.7□□□□□ -1.5
PDLIM5-218ENST00000513341 PPM1JQ5JR12 505 aa5.7□□□□□ -1.5
PDLIM5-218ENST00000513341 SFRP5Q5T4F7 317 aa5.7□□□□□ -1.5
PDLIM5-218ENST00000513341 ARMCX6Q7L4S7 300 aa5.7□□□□□ -1.5
PDLIM5-218ENST00000513341 DEFB132Q7Z7B7 95 aa5.7□□□□□ -1.5
PDLIM5-218ENST00000513341 STK35Q8TDR2 534 aa5.7□□□□□ -1.5
PDLIM5-218ENST00000513341 RRP7BPQ9NSQ0 103 aa5.7□□□□□ -1.5
PDLIM5-218ENST00000513341 EGFL7Q9UHF1 273 aa5.7□□□□□ -1.5
PDLIM5-218ENST00000513341 GPN3Q9UHW5 284 aaPredicted RBP5.7□□□□□ -1.5
PDLIM5-218ENST00000513341 TMEM59LQ9UK28 342 aa5.7□□□□□ -1.5
PDLIM5-218ENST00000513341 LAMC1P11047 1609 aa5.7□□□□□ -1.5
PDLIM5-218ENST00000513341 TRPM2O94759 1503 aa5.69□□□□□ -1.5
PDLIM5-218ENST00000513341 SPHKAPQ2M3C7 1700 aa5.69□□□□□ -1.5
PDLIM5-218ENST00000513341 TMEM88BA6NKF7 163 aa5.69□□□□□ -1.5
PDLIM5-218ENST00000513341 PRR33A8MZF0 331 aa5.69□□□□□ -1.5
PDLIM5-218ENST00000513341 PSPNO60542 156 aa5.69□□□□□ -1.5
PDLIM5-218ENST00000513341 GADD45BO75293 160 aaPredicted RBP5.69□□□□□ -1.5
PDLIM5-218ENST00000513341 SLITRK5O94991 958 aa5.69□□□□□ -1.5
PDLIM5-218ENST00000513341 DLG4P78352 724 aa5.69□□□□□ -1.5
PDLIM5-218ENST00000513341 ORC1Q13415 861 aa5.69□□□□□ -1.5
PDLIM5-218ENST00000513341 DTHD1Q6ZMT9 781 aa5.69□□□□□ -1.5
PDLIM5-218ENST00000513341 CDC37L1Q7L3B6 337 aa5.69□□□□□ -1.5
PDLIM5-218ENST00000513341 TMPRSS7Q7RTY8 843 aa5.69□□□□□ -1.5
PDLIM5-218ENST00000513341 UBE3DQ7Z6J8 389 aa5.69□□□□□ -1.5
PDLIM5-218ENST00000513341 UNC5CLQ8IV45 518 aa5.69□□□□□ -1.5
PDLIM5-218ENST00000513341 TMEM151BQ8IW70 566 aa5.69□□□□□ -1.5
PDLIM5-218ENST00000513341 BRPF3Q9ULD4 1205 aa5.69□□□□□ -1.5
PDLIM5-218ENST00000513341 TMEM131LA2VDJ0 1609 aa5.69□□□□□ -1.5
PDLIM5-218ENST00000513341 UNC13BO14795 1591 aa5.68□□□□□ -1.5
PDLIM5-218ENST00000513341 H3BS24 57 aa5.68□□□□□ -1.5
PDLIM5-218ENST00000513341 TRIM37O94972 964 aa5.68□□□□□ -1.5
PDLIM5-218ENST00000513341 NFKB2Q00653 900 aa5.68□□□□□ -1.5
PDLIM5-218ENST00000513341 CDKAL1Q5VV42 579 aa5.68□□□□□ -1.5
PDLIM5-218ENST00000513341 TCERG1LQ5VWI1 586 aa5.68□□□□□ -1.5
PDLIM5-218ENST00000513341 MAP1SQ66K74 1059 aaPredicted RBP5.68□□□□□ -1.5
PDLIM5-218ENST00000513341 ZNF746Q6NUN9 644 aaPredicted RBP5.68□□□□□ -1.5
PDLIM5-218ENST00000513341 DDX17Q92841 729 aaKnown RBP5.68□□□□□ -1.5
PDLIM5-218ENST00000513341 PPP4R2Q9NY27 417 aa5.68□□□□□ -1.5
PDLIM5-218ENST00000513341 SLAMF8Q9P0V8 285 aa5.68□□□□□ -1.5
PDLIM5-218ENST00000513341 ANKRD30AQ9BXX3 1397 aa5.67□□□□□ -1.5
PDLIM5-218ENST00000513341 MYO5BQ9ULV0 1848 aa5.67□□□□□ -1.5
PDLIM5-218ENST00000513341 COL22A1Q8NFW1 1626 aaPredicted RBP5.67□□□□□ -1.5
PDLIM5-218ENST00000513341 PTPRUQ92729 1446 aa5.67□□□□□ -1.5
PDLIM5-218ENST00000513341 EIF1AYO14602 144 aaKnown RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms