RNA–Protein interactions for RNA: ENST00000513159.5

PTPN20-227, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-227ENST00000513159 LIFRP42702 1097 aa12.14□□□□□ -0.47
PTPN20-227ENST00000513159 TROAPQ12815 778 aa12.14□□□□□ -0.47
PTPN20-227ENST00000513159 TOB2Q14106 344 aaPredicted RBP12.14□□□□□ -0.47
PTPN20-227ENST00000513159 WTAPQ15007 396 aa12.14□□□□□ -0.47
PTPN20-227ENST00000513159 CCDC178Q5BJE1 867 aa12.14□□□□□ -0.47
PTPN20-227ENST00000513159 IFIT1BQ5T764 474 aaKnown RBP12.14□□□□□ -0.47
PTPN20-227ENST00000513159 TTBK2Q6IQ55 1244 aa12.14□□□□□ -0.47
PTPN20-227ENST00000513159 BLOC1S2Q6QNY1 142 aa12.14□□□□□ -0.47
PTPN20-227ENST00000513159 RUFY3Q7L099 469 aa12.14□□□□□ -0.47
PTPN20-227ENST00000513159 FBXL16Q8N461 479 aa12.14□□□□□ -0.47
PTPN20-227ENST00000513159 TMEM87BQ96K49 555 aa12.14□□□□□ -0.47
PTPN20-227ENST00000513159 SH2D4AQ9H788 454 aa12.14□□□□□ -0.47
PTPN20-227ENST00000513159 GOPCQ9HD26 462 aa12.14□□□□□ -0.47
PTPN20-227ENST00000513159 TXNRD2Q9NNW7 524 aa12.14□□□□□ -0.47
PTPN20-227ENST00000513159 PLXNB2O15031 1838 aa12.14□□□□□ -0.47
PTPN20-227ENST00000513159 SPDYE16A6NNV3 312 aaPredicted RBP12.13□□□□□ -0.47
PTPN20-227ENST00000513159 USP17L15C9J2P7 530 aa12.13□□□□□ -0.47
PTPN20-227ENST00000513159 USP17L13C9JLJ4 530 aa12.13□□□□□ -0.47
PTPN20-227ENST00000513159 USP17L11C9JVI0 530 aa12.13□□□□□ -0.47
PTPN20-227ENST00000513159 USP17L18D6R9N7 530 aa12.13□□□□□ -0.47
PTPN20-227ENST00000513159 USP17L22D6RA61 530 aa12.13□□□□□ -0.47
PTPN20-227ENST00000513159 USP17L17D6RBQ6 530 aa12.13□□□□□ -0.47
PTPN20-227ENST00000513159 USP17L19D6RCP7 530 aa12.13□□□□□ -0.47
PTPN20-227ENST00000513159 USP17L20D6RJB6 530 aa12.13□□□□□ -0.47
PTPN20-227ENST00000513159 BCRP11274 1271 aa12.13□□□□□ -0.47
PTPN20-227ENST00000513159 MAP2K1Q02750 393 aaPredicted RBP12.13□□□□□ -0.47
PTPN20-227ENST00000513159 USP17L24Q0WX57 530 aa12.13□□□□□ -0.47
PTPN20-227ENST00000513159 TAF1CQ15572 869 aaPredicted RBP12.13□□□□□ -0.47
PTPN20-227ENST00000513159 Q6ZUG5 572 aa12.13□□□□□ -0.47
PTPN20-227ENST00000513159 KCTD1Q719H9 257 aa12.13□□□□□ -0.47
PTPN20-227ENST00000513159 SGMS1Q86VZ5 419 aa12.13□□□□□ -0.47
PTPN20-227ENST00000513159 RAB11FIP4Q86YS3 637 aa12.13□□□□□ -0.47
PTPN20-227ENST00000513159 STAG2Q8N3U4 1231 aa12.13□□□□□ -0.47
PTPN20-227ENST00000513159 GMCL1Q96IK5 515 aa12.13□□□□□ -0.47
PTPN20-227ENST00000513159 TBC1D32Q96NH3 1257 aa12.13□□□□□ -0.47
PTPN20-227ENST00000513159 MYL10Q9BUA6 226 aa12.13□□□□□ -0.47
PTPN20-227ENST00000513159 CPVLQ9H3G5 476 aa12.13□□□□□ -0.47
PTPN20-227ENST00000513159 RBPJLQ9UBG7 517 aa12.13□□□□□ -0.47
PTPN20-227ENST00000513159 ADAMTS5Q9UNA0 930 aa12.13□□□□□ -0.47
PTPN20-227ENST00000513159 MTMR7Q9Y216 660 aa12.13□□□□□ -0.47
PTPN20-227ENST00000513159 FRMPD2Q68DX3 1309 aaPredicted RBP12.12□□□□□ -0.47
PTPN20-227ENST00000513159 FOXN1O15353 648 aa12.12□□□□□ -0.47
PTPN20-227ENST00000513159 RAD21O60216 631 aa12.12□□□□□ -0.47
PTPN20-227ENST00000513159 TLR2O60603 784 aa12.12□□□□□ -0.47
PTPN20-227ENST00000513159 HMGB1P09429 215 aaKnown RBP12.12□□□□□ -0.47
PTPN20-227ENST00000513159 GOLGA8HP0CJ92 632 aa12.12□□□□□ -0.47
PTPN20-227ENST00000513159 BMP3P12645 472 aa12.12□□□□□ -0.47
PTPN20-227ENST00000513159 PSMA5P28066 241 aa12.12□□□□□ -0.47
PTPN20-227ENST00000513159 DSG3P32926 999 aa12.12□□□□□ -0.47
PTPN20-227ENST00000513159 HERVK_113P62684 666 aa12.12□□□□□ -0.47
PTPN20-227ENST00000513159 ZNF543Q08ER8 600 aa12.12□□□□□ -0.47
PTPN20-227ENST00000513159 PPP4R3BQ5MIZ7 849 aa12.12□□□□□ -0.47
PTPN20-227ENST00000513159 C17orf99Q6UX52 265 aa12.12□□□□□ -0.47
PTPN20-227ENST00000513159 LBX2Q6XYB7 198 aa12.12□□□□□ -0.47
PTPN20-227ENST00000513159 NBPF11Q86T75 865 aa12.12□□□□□ -0.47
PTPN20-227ENST00000513159 ZNF654Q8IZM8 581 aa12.12□□□□□ -0.47
PTPN20-227ENST00000513159 REPS2Q8NFH8 660 aa12.12□□□□□ -0.47
PTPN20-227ENST00000513159 DCAF4Q8WV16 495 aa12.12□□□□□ -0.47
PTPN20-227ENST00000513159 ATG4CQ96DT6 458 aa12.12□□□□□ -0.47
PTPN20-227ENST00000513159 LARP6Q9BRS8 491 aaKnown RBP12.12□□□□□ -0.47
PTPN20-227ENST00000513159 KAT14Q9H8E8 782 aa12.12□□□□□ -0.47
PTPN20-227ENST00000513159 FAM217BQ9NTX9 383 aaPredicted RBP12.12□□□□□ -0.47
PTPN20-227ENST00000513159 SAGE1Q9NXZ1 904 aa12.12□□□□□ -0.47
PTPN20-227ENST00000513159 BTBD7Q9P203 1132 aa12.12□□□□□ -0.47
PTPN20-227ENST00000513159 MAD2L2Q9UI95 211 aa12.12□□□□□ -0.47
PTPN20-227ENST00000513159 HPS5Q9UPZ3 1129 aa12.12□□□□□ -0.47
PTPN20-227ENST00000513159 PALM3A6NDB9 673 aaPredicted RBP12.11□□□□□ -0.47
PTPN20-227ENST00000513159 TMEM232C9JQI7 657 aa12.11□□□□□ -0.47
PTPN20-227ENST00000513159 EIF5BO60841 1220 aaKnown RBP12.11□□□□□ -0.47
PTPN20-227ENST00000513159 ALDH1A1P00352 501 aa12.11□□□□□ -0.47
PTPN20-227ENST00000513159 HSPA1AP0DMV8 641 aaKnown RBP12.11□□□□□ -0.47
PTPN20-227ENST00000513159 HSPA1BP0DMV9 641 aaKnown RBP12.11□□□□□ -0.47
PTPN20-227ENST00000513159 RXRAP19793 462 aa12.11□□□□□ -0.47
PTPN20-227ENST00000513159 CTGFP29279 349 aa12.11□□□□□ -0.47
PTPN20-227ENST00000513159 SLC1A4P43007 532 aa12.11□□□□□ -0.47
PTPN20-227ENST00000513159 EVCP57679 992 aa12.11□□□□□ -0.47
PTPN20-227ENST00000513159 APOBRQ0VD83 1088 aa12.11□□□□□ -0.47
PTPN20-227ENST00000513159 COG2Q14746 738 aa12.11□□□□□ -0.47
PTPN20-227ENST00000513159 GRM4Q14833 912 aa12.11□□□□□ -0.47
PTPN20-227ENST00000513159 Q3C1V9 767 aa12.11□□□□□ -0.47
PTPN20-227ENST00000513159 APOA5Q6Q788 366 aa12.11□□□□□ -0.47
PTPN20-227ENST00000513159 BTNL9Q6UXG8 535 aa12.11□□□□□ -0.47
PTPN20-227ENST00000513159 BRF1Q92994 677 aa12.11□□□□□ -0.47
PTPN20-227ENST00000513159 TANGO6Q9C0B7 1094 aa12.11□□□□□ -0.47
PTPN20-227ENST00000513159 GPCPD1Q9NPB8 672 aa12.11□□□□□ -0.47
PTPN20-227ENST00000513159 CPA4Q9UI42 421 aa12.11□□□□□ -0.47
PTPN20-227ENST00000513159 PPP1R9AQ9ULJ8 1098 aa12.11□□□□□ -0.47
PTPN20-227ENST00000513159 CYP46A1Q9Y6A2 500 aa12.11□□□□□ -0.47
PTPN20-227ENST00000513159 LCTP09848 1927 aa12.11□□□□□ -0.47
PTPN20-227ENST00000513159 CYTH3O43739 400 aa12.1□□□□□ -0.47
PTPN20-227ENST00000513159 PLA2G6O60733 806 aa12.1□□□□□ -0.47
PTPN20-227ENST00000513159 FLOT1O75955 427 aa12.1□□□□□ -0.47
PTPN20-227ENST00000513159 HSPA8P11142 646 aaKnown RBP12.1□□□□□ -0.47
PTPN20-227ENST00000513159 SLC16A2P36021 539 aa12.1□□□□□ -0.47
PTPN20-227ENST00000513159 IRX3P78415 501 aaPredicted RBP12.1□□□□□ -0.47
PTPN20-227ENST00000513159 SART3Q15020 963 aaKnown RBP12.1□□□□□ -0.47
PTPN20-227ENST00000513159 OTUD7BQ6GQQ9 843 aa12.1□□□□□ -0.47
PTPN20-227ENST00000513159 PARK7Q99497 189 aaKnown RBP12.1□□□□□ -0.47
PTPN20-227ENST00000513159 UBA5Q9GZZ9 404 aa12.1□□□□□ -0.47
PTPN20-227ENST00000513159 ALDH8A1Q9H2A2 487 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms