RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 DGKHQ86XP1 1220 aa19.3■□□□□ 0.68
HMGCL-209ENST00000513148 GMCL1P1Q8NEA9 526 aa19.3■□□□□ 0.68
HMGCL-209ENST00000513148 TTC14Q96N46 770 aa19.3■□□□□ 0.68
HMGCL-209ENST00000513148 KAT14Q9H8E8 782 aa19.3■□□□□ 0.68
HMGCL-209ENST00000513148 PNMA3Q9UL41 463 aa19.3■□□□□ 0.68
HMGCL-209ENST00000513148 SLC45A1Q9Y2W3 748 aa19.3■□□□□ 0.68
HMGCL-209ENST00000513148 USP17L15C9J2P7 530 aa19.3■□□□□ 0.68
HMGCL-209ENST00000513148 USP17L13C9JLJ4 530 aa19.3■□□□□ 0.68
HMGCL-209ENST00000513148 USP17L11C9JVI0 530 aa19.3■□□□□ 0.68
HMGCL-209ENST00000513148 USP17L18D6R9N7 530 aa19.3■□□□□ 0.68
HMGCL-209ENST00000513148 USP17L22D6RA61 530 aa19.3■□□□□ 0.68
HMGCL-209ENST00000513148 USP17L17D6RBQ6 530 aa19.3■□□□□ 0.68
HMGCL-209ENST00000513148 USP17L19D6RCP7 530 aa19.3■□□□□ 0.68
HMGCL-209ENST00000513148 USP17L20D6RJB6 530 aa19.3■□□□□ 0.68
HMGCL-209ENST00000513148 WDR46O15213 610 aaKnown RBP19.3■□□□□ 0.68
HMGCL-209ENST00000513148 USP17L24Q0WX57 530 aa19.3■□□□□ 0.68
HMGCL-209ENST00000513148 TMEM67Q5HYA8 995 aa19.3■□□□□ 0.68
HMGCL-209ENST00000513148 GPHNQ9NQX3 736 aaPredicted RBP19.3■□□□□ 0.68
HMGCL-209ENST00000513148 HOXA7P31268 230 aaPredicted RBP19.29■□□□□ 0.68
HMGCL-209ENST00000513148 SEC23AQ15436 765 aa19.29■□□□□ 0.68
HMGCL-209ENST00000513148 SENP2Q9HC62 589 aa19.29■□□□□ 0.68
HMGCL-209ENST00000513148 SYNPO2Q9UMS6 1093 aa19.29■□□□□ 0.68
HMGCL-209ENST00000513148 WTAPQ15007 396 aa19.29■□□□□ 0.68
HMGCL-209ENST00000513148 CATSPERGQ6ZRH7 1159 aa19.29■□□□□ 0.68
HMGCL-209ENST00000513148 PNMA1Q8ND90 353 aa19.29■□□□□ 0.68
HMGCL-209ENST00000513148 CPA4Q9UI42 421 aa19.29■□□□□ 0.68
HMGCL-209ENST00000513148 PARP14Q460N5 1801 aa19.28■□□□□ 0.68
HMGCL-209ENST00000513148 FLOT1O75955 427 aa19.28■□□□□ 0.68
HMGCL-209ENST00000513148 CASTP20810 708 aaKnown RBP19.28■□□□□ 0.68
HMGCL-209ENST00000513148 SLC1A4P43007 532 aa19.28■□□□□ 0.68
HMGCL-209ENST00000513148 P2RX7Q99572 595 aaKnown RBP19.28■□□□□ 0.68
HMGCL-209ENST00000513148 TLR2O60603 784 aa19.27■□□□□ 0.68
HMGCL-209ENST00000513148 CCDC96Q2M329 555 aa19.27■□□□□ 0.68
HMGCL-209ENST00000513148 KCTD1Q719H9 257 aa19.27■□□□□ 0.68
HMGCL-209ENST00000513148 IGDCC4Q8TDY8 1250 aa19.27■□□□□ 0.68
HMGCL-209ENST00000513148 PDCL3Q9H2J4 239 aa19.27■□□□□ 0.68
HMGCL-209ENST00000513148 FBXO28Q9NVF7 368 aa19.27■□□□□ 0.68
HMGCL-209ENST00000513148 ECM2O94769 699 aaPredicted RBP19.27■□□□□ 0.67
HMGCL-209ENST00000513148 BMP3P12645 472 aa19.27■□□□□ 0.67
HMGCL-209ENST00000513148 HERVK_113P62684 666 aa19.27■□□□□ 0.67
HMGCL-209ENST00000513148 FRMPD2Q68DX3 1309 aaPredicted RBP19.27■□□□□ 0.67
HMGCL-209ENST00000513148 BLOC1S2Q6QNY1 142 aa19.27■□□□□ 0.67
HMGCL-209ENST00000513148 DHX32Q7L7V1 743 aaKnown RBP19.27■□□□□ 0.67
HMGCL-209ENST00000513148 RLFQ13129 1914 aa19.26■□□□□ 0.67
HMGCL-209ENST00000513148 PEX10O60683 326 aa19.26■□□□□ 0.67
HMGCL-209ENST00000513148 HMGB1P09429 215 aaKnown RBP19.26■□□□□ 0.67
HMGCL-209ENST00000513148 ANKS1AQ92625 1134 aa19.26■□□□□ 0.67
HMGCL-209ENST00000513148 GMCL1Q96IK5 515 aa19.26■□□□□ 0.67
HMGCL-209ENST00000513148 CFHR5Q9BXR6 569 aa19.26■□□□□ 0.67
HMGCL-209ENST00000513148 LY9Q9HBG7 655 aa19.26■□□□□ 0.67
HMGCL-209ENST00000513148 ADGRA2Q96PE1 1338 aa19.25■□□□□ 0.67
HMGCL-209ENST00000513148 SH2B2O14492 632 aaPredicted RBP19.25■□□□□ 0.67
HMGCL-209ENST00000513148 HSPA8P11142 646 aaKnown RBP19.25■□□□□ 0.67
HMGCL-209ENST00000513148 PDHBP11177 359 aa19.25■□□□□ 0.67
HMGCL-209ENST00000513148 PSMA5P28066 241 aa19.25■□□□□ 0.67
HMGCL-209ENST00000513148 IKQ13123 557 aaPredicted RBP19.25■□□□□ 0.67
HMGCL-209ENST00000513148 NFXL1Q6ZNB6 911 aa19.25■□□□□ 0.67
HMGCL-209ENST00000513148 ANKRD13CQ8N6S4 541 aa19.25■□□□□ 0.67
HMGCL-209ENST00000513148 TMEM87BQ96K49 555 aa19.25■□□□□ 0.67
HMGCL-209ENST00000513148 PAGR1Q9BTK6 254 aa19.25■□□□□ 0.67
HMGCL-209ENST00000513148 UPF3BQ9BZI7 483 aaKnown RBP19.25■□□□□ 0.67
HMGCL-209ENST00000513148 SPDYE16A6NNV3 312 aaPredicted RBP19.25■□□□□ 0.67
HMGCL-209ENST00000513148 TMEM232C9JQI7 657 aa19.25■□□□□ 0.67
HMGCL-209ENST00000513148 LBX1P52954 281 aa19.25■□□□□ 0.67
HMGCL-209ENST00000513148 FGD1P98174 961 aa19.25■□□□□ 0.67
HMGCL-209ENST00000513148 COG2Q14746 738 aa19.25■□□□□ 0.67
HMGCL-209ENST00000513148 GPR25O00155 361 aa19.24■□□□□ 0.67
HMGCL-209ENST00000513148 CTCFP49711 727 aaPredicted RBP19.24■□□□□ 0.67
HMGCL-209ENST00000513148 EXOSC10Q01780 885 aaKnown RBP19.24■□□□□ 0.67
HMGCL-209ENST00000513148 DCAF4Q8WV16 495 aa19.24■□□□□ 0.67
HMGCL-209ENST00000513148 GPCPD1Q9NPB8 672 aa19.24■□□□□ 0.67
HMGCL-209ENST00000513148 COL11A1P12107 1806 aaPredicted RBP19.24■□□□□ 0.67
HMGCL-209ENST00000513148 GOLGA8HP0CJ92 632 aa19.24■□□□□ 0.67
HMGCL-209ENST00000513148 RPS6KB1P23443 525 aa19.24■□□□□ 0.67
HMGCL-209ENST00000513148 KIFC2Q96AC6 838 aa19.24■□□□□ 0.67
HMGCL-209ENST00000513148 ATG4CQ96DT6 458 aa19.24■□□□□ 0.67
HMGCL-209ENST00000513148 MYL10Q9BUA6 226 aa19.24■□□□□ 0.67
HMGCL-209ENST00000513148 WDR19Q8NEZ3 1342 aa19.23■□□□□ 0.67
HMGCL-209ENST00000513148 CCDC69A6NI79 296 aa19.23■□□□□ 0.67
HMGCL-209ENST00000513148 STAT2P52630 851 aa19.23■□□□□ 0.67
HMGCL-209ENST00000513148 POTEEQ6S8J3 1075 aa19.23■□□□□ 0.67
HMGCL-209ENST00000513148 C17orf99Q6UX52 265 aa19.23■□□□□ 0.67
HMGCL-209ENST00000513148 ZNF296Q8WUU4 475 aaPredicted RBP19.23■□□□□ 0.67
HMGCL-209ENST00000513148 SLF1Q9BQI6 1058 aa19.23■□□□□ 0.67
HMGCL-209ENST00000513148 MTA3Q9BTC8 594 aa19.23■□□□□ 0.67
HMGCL-209ENST00000513148 UPF2Q9HAU5 1272 aaKnown RBP19.23■□□□□ 0.67
HMGCL-209ENST00000513148 TXNRD2Q9NNW7 524 aa19.23■□□□□ 0.67
HMGCL-209ENST00000513148 CASP8AP2Q9UKL3 1982 aa19.23■□□□□ 0.67
HMGCL-209ENST00000513148 ZSWIM8A7E2V4 1837 aa19.22■□□□□ 0.67
HMGCL-209ENST00000513148 DSG3P32926 999 aa19.22■□□□□ 0.67
HMGCL-209ENST00000513148 ANAPC15P60006 121 aa19.22■□□□□ 0.67
HMGCL-209ENST00000513148 TTBK2Q6IQ55 1244 aa19.22■□□□□ 0.67
HMGCL-209ENST00000513148 Q6ZUG5 572 aa19.22■□□□□ 0.67
HMGCL-209ENST00000513148 RUFY3Q7L099 469 aa19.22■□□□□ 0.67
HMGCL-209ENST00000513148 RAB11FIP4Q86YS3 637 aa19.22■□□□□ 0.67
HMGCL-209ENST00000513148 NUP133Q8WUM0 1156 aa19.22■□□□□ 0.67
HMGCL-209ENST00000513148 C22orf23Q9BZE7 217 aa19.22■□□□□ 0.67
HMGCL-209ENST00000513148 HOXC10Q9NYD6 342 aa19.22■□□□□ 0.67
HMGCL-209ENST00000513148 PPP1R9AQ9ULJ8 1098 aa19.22■□□□□ 0.67
HMGCL-209ENST00000513148 CYP46A1Q9Y6A2 500 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms