RNA–Protein interactions for RNA: ENST00000512962.5

SDHA-215, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-215ENST00000512962 XRCC5P13010 732 aaKnown RBP15.25■□□□□ 0.03
SDHA-215ENST00000512962 NUDT12Q9BQG2 462 aa15.25■□□□□ 0.03
SDHA-215ENST00000512962 KRTAP3-3Q9BYR6 98 aa15.25■□□□□ 0.03
SDHA-215ENST00000512962 KRTAP3-2Q9BYR7 98 aa15.25■□□□□ 0.03
SDHA-215ENST00000512962 SENP6Q9GZR1 1112 aaPredicted RBP15.25■□□□□ 0.03
SDHA-215ENST00000512962 CAP2P40123 477 aa15.24■□□□□ 0.03
SDHA-215ENST00000512962 HERVK_113P62684 666 aa15.24■□□□□ 0.03
SDHA-215ENST00000512962 WDR63Q8IWG1 891 aa15.24■□□□□ 0.03
SDHA-215ENST00000512962 OSBPL5Q9H0X9 879 aaPredicted RBP15.24■□□□□ 0.03
SDHA-215ENST00000512962 DENND2AQ9ULE3 1009 aa15.24■□□□□ 0.03
SDHA-215ENST00000512962 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.24■□□□□ 0.03
SDHA-215ENST00000512962 MYO5AQ9Y4I1 1855 aaKnown RBP15.24■□□□□ 0.03
SDHA-215ENST00000512962 PDIA4P13667 645 aaKnown RBP15.23■□□□□ 0.03
SDHA-215ENST00000512962 JUNDP17535 347 aa15.23■□□□□ 0.03
SDHA-215ENST00000512962 RTP1P59025 263 aa15.23■□□□□ 0.03
SDHA-215ENST00000512962 CCDC102BQ68D86 513 aa15.23■□□□□ 0.03
SDHA-215ENST00000512962 GPR142Q7Z601 462 aa15.23■□□□□ 0.03
SDHA-215ENST00000512962 DZIP1Q86YF9 867 aaKnown RBP15.23■□□□□ 0.03
SDHA-215ENST00000512962 TRPV1Q8NER1 839 aa15.23■□□□□ 0.03
SDHA-215ENST00000512962 SOCS4Q8WXH5 440 aa15.23■□□□□ 0.03
SDHA-215ENST00000512962 ALG2Q9H553 416 aa15.23■□□□□ 0.03
SDHA-215ENST00000512962 DNAJC18Q9H819 358 aa15.23■□□□□ 0.03
SDHA-215ENST00000512962 ABCF2Q9UG63 623 aa15.23■□□□□ 0.03
SDHA-215ENST00000512962 GPR75-ASB3A0A0A6YYF3 556 aa15.22■□□□□ 0.03
SDHA-215ENST00000512962 MECOMQ03112 1051 aa15.22■□□□□ 0.03
SDHA-215ENST00000512962 PI16Q6UXB8 463 aa15.22■□□□□ 0.03
SDHA-215ENST00000512962 LBHD1Q9BQE6 289 aaPredicted RBP15.22■□□□□ 0.03
SDHA-215ENST00000512962 PA2G4Q9UQ80 394 aaKnown RBP15.22■□□□□ 0.03
SDHA-215ENST00000512962 USP17L5A8MUK1 530 aa15.21■□□□□ 0.03
SDHA-215ENST00000512962 CNMDO75829 334 aa15.21■□□□□ 0.03
SDHA-215ENST00000512962 F12P00748 615 aaPredicted RBP15.21■□□□□ 0.03
SDHA-215ENST00000512962 HOXA7P31268 230 aaPredicted RBP15.21■□□□□ 0.03
SDHA-215ENST00000512962 ERVK-9P63128 1117 aa15.21■□□□□ 0.03
SDHA-215ENST00000512962 ERVK-24P63145 666 aa15.21■□□□□ 0.03
SDHA-215ENST00000512962 IRX3P78415 501 aaPredicted RBP15.21■□□□□ 0.03
SDHA-215ENST00000512962 PABPC4Q13310 644 aaKnown RBP eCLIP15.21■□□□□ 0.03
SDHA-215ENST00000512962 THSD4Q6ZMP0 1018 aa15.21■□□□□ 0.03
SDHA-215ENST00000512962 SH3RF1Q7Z6J0 888 aa15.21■□□□□ 0.03
SDHA-215ENST00000512962 GPRC5AQ8NFJ5 357 aa15.21■□□□□ 0.03
SDHA-215ENST00000512962 APBA2Q99767 749 aa15.21■□□□□ 0.03
SDHA-215ENST00000512962 PAGR1Q9BTK6 254 aa15.21■□□□□ 0.03
SDHA-215ENST00000512962 FOSL2P15408 326 aa15.2■□□□□ 0.02
SDHA-215ENST00000512962 RGS2P41220 211 aa15.2■□□□□ 0.02
SDHA-215ENST00000512962 EPHB4P54760 987 aa15.2■□□□□ 0.02
SDHA-215ENST00000512962 BACE1P56817 501 aa15.2■□□□□ 0.02
SDHA-215ENST00000512962 BADQ92934 168 aa15.2■□□□□ 0.02
SDHA-215ENST00000512962 WDR18Q9BV38 432 aa15.2■□□□□ 0.02
SDHA-215ENST00000512962 GNL3LQ9NVN8 582 aaKnown RBP15.2■□□□□ 0.02
SDHA-215ENST00000512962 ATP11BQ9Y2G3 1177 aa15.2■□□□□ 0.02
SDHA-215ENST00000512962 GDF11O95390 407 aa15.19■□□□□ 0.02
SDHA-215ENST00000512962 ITGB8P26012 769 aa15.19■□□□□ 0.02
SDHA-215ENST00000512962 MAPK4P31152 587 aa15.19■□□□□ 0.02
SDHA-215ENST00000512962 TIMM10P62072 90 aa15.19■□□□□ 0.02
SDHA-215ENST00000512962 PTPRNQ16849 979 aa15.19■□□□□ 0.02
SDHA-215ENST00000512962 TBC1D9Q6ZT07 1266 aa15.19■□□□□ 0.02
SDHA-215ENST00000512962 PLEKHH3Q7Z736 793 aa15.19■□□□□ 0.02
SDHA-215ENST00000512962 PNMA1Q8ND90 353 aa15.19■□□□□ 0.02
SDHA-215ENST00000512962 DDX20Q9UHI6 824 aaKnown RBP15.19■□□□□ 0.02
SDHA-215ENST00000512962 ZNF236Q9UL36 1845 aa15.18■□□□□ 0.02
SDHA-215ENST00000512962 TRIM43BA6NCK2 446 aa15.18■□□□□ 0.02
SDHA-215ENST00000512962 CIAO1O76071 339 aa15.18■□□□□ 0.02
SDHA-215ENST00000512962 IGHA2P01877 340 aa15.18■□□□□ 0.02
SDHA-215ENST00000512962 CYP2C19P33261 490 aa15.18■□□□□ 0.02
SDHA-215ENST00000512962 COPS2P61201 443 aa15.18■□□□□ 0.02
SDHA-215ENST00000512962 PDE3AQ14432 1141 aa15.18■□□□□ 0.02
SDHA-215ENST00000512962 MSS51Q4VC12 460 aa15.18■□□□□ 0.02
SDHA-215ENST00000512962 GJC2Q5T442 439 aaPredicted RBP15.18■□□□□ 0.02
SDHA-215ENST00000512962 ANO1Q5XXA6 986 aa15.18■□□□□ 0.02
SDHA-215ENST00000512962 NPLOC4Q8TAT6 608 aa15.18■□□□□ 0.02
SDHA-215ENST00000512962 TRIM43Q96BQ3 446 aaPredicted RBP15.18■□□□□ 0.02
SDHA-215ENST00000512962 NSUN4Q96CB9 384 aaKnown RBP15.18■□□□□ 0.02
SDHA-215ENST00000512962 PRDM5Q9NQX1 630 aaPredicted RBP15.18■□□□□ 0.02
SDHA-215ENST00000512962 PDLIM7Q9NR12 457 aa15.18■□□□□ 0.02
SDHA-215ENST00000512962 MAP10Q9P2G4 905 aa15.18■□□□□ 0.02
SDHA-215ENST00000512962 CEP126Q9P2H0 1117 aa15.18■□□□□ 0.02
SDHA-215ENST00000512962 PDS5AQ29RF7 1337 aaKnown RBP15.17■□□□□ 0.02
SDHA-215ENST00000512962 A0A0G2JMZ2 1700 aa15.17■□□□□ 0.02
SDHA-215ENST00000512962 DNM1LO00429 736 aa15.17■□□□□ 0.02
SDHA-215ENST00000512962 SOX11P35716 441 aa15.17■□□□□ 0.02
SDHA-215ENST00000512962 TRIM60Q495X7 471 aa15.17■□□□□ 0.02
SDHA-215ENST00000512962 TRMT44Q8IYL2 757 aaKnown RBP15.17■□□□□ 0.02
SDHA-215ENST00000512962 SH3RF3Q8TEJ3 882 aaPredicted RBP15.17■□□□□ 0.02
SDHA-215ENST00000512962 LPAR1Q92633 364 aa15.17■□□□□ 0.02
SDHA-215ENST00000512962 AS3MTQ9HBK9 375 aa15.17■□□□□ 0.02
SDHA-215ENST00000512962 SMAD3P84022 425 aaKnown RBP15.16■□□□□ 0.02
SDHA-215ENST00000512962 GRIN2CQ14957 1233 aa15.16■□□□□ 0.02
SDHA-215ENST00000512962 ZGPATQ8N5A5 531 aaKnown RBP15.16■□□□□ 0.02
SDHA-215ENST00000512962 FAM160A2Q8N612 972 aaPredicted RBP15.16■□□□□ 0.02
SDHA-215ENST00000512962 TMOD4Q9NZQ9 345 aa15.16■□□□□ 0.02
SDHA-215ENST00000512962 HMG20BQ9P0W2 317 aa15.16■□□□□ 0.02
SDHA-215ENST00000512962 FKBPLQ9UIM3 349 aa15.16■□□□□ 0.02
SDHA-215ENST00000512962 TNFRSF10AO00220 468 aa15.15■□□□□ 0.02
SDHA-215ENST00000512962 CYBAP13498 195 aa15.15■□□□□ 0.02
SDHA-215ENST00000512962 CNGA1P29973 690 aa15.15■□□□□ 0.02
SDHA-215ENST00000512962 SNX17Q15036 470 aa15.15■□□□□ 0.02
SDHA-215ENST00000512962 TJAP1Q5JTD0 557 aa15.15■□□□□ 0.02
SDHA-215ENST00000512962 SLC39A5Q6ZMH5 540 aa15.15■□□□□ 0.02
SDHA-215ENST00000512962 RETREG2Q8NC44 543 aa15.15■□□□□ 0.02
SDHA-215ENST00000512962 SSH1Q8WYL5 1049 aa15.15■□□□□ 0.02
SDHA-215ENST00000512962 KCTD12Q96CX2 325 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms