RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 VPS53Q5VIR6 699 aa14.36□□□□□ -0.11
CDK7-208ENST00000512687 WDR78Q5VTH9 848 aa14.36□□□□□ -0.11
CDK7-208ENST00000512687 CCAR1Q8IX12 1150 aaKnown RBP14.36□□□□□ -0.11
CDK7-208ENST00000512687 DIS3LQ8TF46 1054 aaKnown RBP14.36□□□□□ -0.11
CDK7-208ENST00000512687 MKNK2Q9HBH9 465 aa14.36□□□□□ -0.11
CDK7-208ENST00000512687 RPTORQ8N122 1335 aa14.36□□□□□ -0.11
CDK7-208ENST00000512687 LCTP09848 1927 aa14.35□□□□□ -0.11
CDK7-208ENST00000512687 SLC15A5A6NIM6 579 aa14.35□□□□□ -0.11
CDK7-208ENST00000512687 TFRCP02786 760 aaKnown RBP14.35□□□□□ -0.11
CDK7-208ENST00000512687 FAM83BQ5T0W9 1011 aa14.35□□□□□ -0.11
CDK7-208ENST00000512687 B4GALNT3Q6L9W6 998 aa14.35□□□□□ -0.11
CDK7-208ENST00000512687 NPLOC4Q8TAT6 608 aa14.35□□□□□ -0.11
CDK7-208ENST00000512687 EVI5LQ96CN4 794 aa14.35□□□□□ -0.11
CDK7-208ENST00000512687 NUP88Q99567 741 aaPredicted RBP14.35□□□□□ -0.11
CDK7-208ENST00000512687 SPATC1LQ9H0A9 340 aa14.35□□□□□ -0.11
CDK7-208ENST00000512687 CWC22Q9HCG8 908 aaKnown RBP14.35□□□□□ -0.11
CDK7-208ENST00000512687 HMX1Q9NP08 348 aaPredicted RBP14.35□□□□□ -0.11
CDK7-208ENST00000512687 HOXC10Q9NYD6 342 aa14.35□□□□□ -0.11
CDK7-208ENST00000512687 TACC3Q9Y6A5 838 aa14.35□□□□□ -0.11
CDK7-208ENST00000512687 A0A0D9SFI3 127 aa14.34□□□□□ -0.11
CDK7-208ENST00000512687 ERCC3P19447 782 aa14.34□□□□□ -0.11
CDK7-208ENST00000512687 CCND3P30281 292 aaPredicted RBP14.34□□□□□ -0.11
CDK7-208ENST00000512687 MNX1P50219 401 aaPredicted RBP14.34□□□□□ -0.11
CDK7-208ENST00000512687 PPARAQ07869 468 aa14.34□□□□□ -0.11
CDK7-208ENST00000512687 TMEM132BQ14DG7 1078 aa14.34□□□□□ -0.11
CDK7-208ENST00000512687 CEP95Q96GE4 821 aa14.34□□□□□ -0.11
CDK7-208ENST00000512687 FAM227BQ96M60 508 aa14.34□□□□□ -0.11
CDK7-208ENST00000512687 NAPBQ9H115 298 aa14.34□□□□□ -0.11
CDK7-208ENST00000512687 RWDD1Q9H446 243 aaPredicted RBP14.34□□□□□ -0.11
CDK7-208ENST00000512687 GOPCQ9HD26 462 aa14.34□□□□□ -0.11
CDK7-208ENST00000512687 NYAP2Q9P242 653 aa14.34□□□□□ -0.11
CDK7-208ENST00000512687 ADAMTS5Q9UNA0 930 aa14.34□□□□□ -0.11
CDK7-208ENST00000512687 SUPT16HQ9Y5B9 1047 aaKnown RBP14.34□□□□□ -0.11
CDK7-208ENST00000512687 H0YGN5 161 aa14.33□□□□□ -0.12
CDK7-208ENST00000512687 RAD21O60216 631 aa14.33□□□□□ -0.12
CDK7-208ENST00000512687 SLC34A2O95436 690 aa14.33□□□□□ -0.12
CDK7-208ENST00000512687 NDUFB10O96000 172 aa14.33□□□□□ -0.12
CDK7-208ENST00000512687 IGHA2P01877 340 aa14.33□□□□□ -0.12
CDK7-208ENST00000512687 HOXC6P09630 235 aa14.33□□□□□ -0.12
CDK7-208ENST00000512687 CTDSPL2Q05D32 466 aa14.33□□□□□ -0.12
CDK7-208ENST00000512687 FAM47AQ5JRC9 791 aa14.33□□□□□ -0.12
CDK7-208ENST00000512687 TRMT44Q8IYL2 757 aaKnown RBP14.33□□□□□ -0.12
CDK7-208ENST00000512687 MB21D1Q8N884 522 aa14.33□□□□□ -0.12
CDK7-208ENST00000512687 SHCBP1Q8NEM2 672 aa14.33□□□□□ -0.12
CDK7-208ENST00000512687 REPS2Q8NFH8 660 aa14.33□□□□□ -0.12
CDK7-208ENST00000512687 NACAP1Q9BZK3 213 aa14.33□□□□□ -0.12
CDK7-208ENST00000512687 INCENPQ9NQS7 918 aa14.33□□□□□ -0.12
CDK7-208ENST00000512687 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.33□□□□□ -0.12
CDK7-208ENST00000512687 ADORA2AP29274 412 aa14.32□□□□□ -0.12
CDK7-208ENST00000512687 NUCB1Q02818 461 aa14.32□□□□□ -0.12
CDK7-208ENST00000512687 NMIQ13287 307 aaPredicted RBP14.32□□□□□ -0.12
CDK7-208ENST00000512687 PLS1Q14651 629 aa14.32□□□□□ -0.12
CDK7-208ENST00000512687 ZNF589Q86UQ0 364 aaPredicted RBP14.32□□□□□ -0.12
CDK7-208ENST00000512687 CHD1LQ86WJ1 897 aa14.32□□□□□ -0.12
CDK7-208ENST00000512687 PLEKHM2Q8IWE5 1019 aa14.32□□□□□ -0.12
CDK7-208ENST00000512687 ZNF444Q8N0Y2 327 aaPredicted RBP14.32□□□□□ -0.12
CDK7-208ENST00000512687 LRRC47Q8N1G4 583 aaKnown RBP14.32□□□□□ -0.12
CDK7-208ENST00000512687 PAWRQ96IZ0 340 aaKnown RBP14.32□□□□□ -0.12
CDK7-208ENST00000512687 MTMR4Q9NYA4 1195 aa14.32□□□□□ -0.12
CDK7-208ENST00000512687 CLIP2Q9UDT6 1046 aa14.32□□□□□ -0.12
CDK7-208ENST00000512687 PPP1R9AQ9ULJ8 1098 aa14.32□□□□□ -0.12
CDK7-208ENST00000512687 IVNS1ABPQ9Y6Y0 642 aa14.32□□□□□ -0.12
CDK7-208ENST00000512687 LRRC37A2A6NM11 1700 aa14.32□□□□□ -0.12
CDK7-208ENST00000512687 F5H6K3 240 aa14.31□□□□□ -0.12
CDK7-208ENST00000512687 VWA5AO00534 786 aa14.31□□□□□ -0.12
CDK7-208ENST00000512687 COBLO75128 1261 aa14.31□□□□□ -0.12
CDK7-208ENST00000512687 KLRC3Q07444 240 aa14.31□□□□□ -0.12
CDK7-208ENST00000512687 LHX8Q68G74 356 aa14.31□□□□□ -0.12
CDK7-208ENST00000512687 NCAPG2Q86XI2 1143 aa14.31□□□□□ -0.12
CDK7-208ENST00000512687 TRPV1Q8NER1 839 aa14.31□□□□□ -0.12
CDK7-208ENST00000512687 NEDD1Q8NHV4 660 aa14.31□□□□□ -0.12
CDK7-208ENST00000512687 DPF3Q92784 378 aa14.31□□□□□ -0.12
CDK7-208ENST00000512687 HTATIP2Q9BUP3 242 aa14.31□□□□□ -0.12
CDK7-208ENST00000512687 HELLSQ9NRZ9 838 aa14.31□□□□□ -0.12
CDK7-208ENST00000512687 ZNF214Q9UL59 606 aaPredicted RBP14.31□□□□□ -0.12
CDK7-208ENST00000512687 OGDHLQ9ULD0 1010 aa14.31□□□□□ -0.12
CDK7-208ENST00000512687 MYH6P13533 1939 aa14.31□□□□□ -0.12
CDK7-208ENST00000512687 CYP2C19P33261 490 aa14.3□□□□□ -0.12
CDK7-208ENST00000512687 IRX6P78412 446 aaPredicted RBP14.3□□□□□ -0.12
CDK7-208ENST00000512687 TFAP4Q01664 338 aa14.3□□□□□ -0.12
CDK7-208ENST00000512687 PDE4BQ07343 736 aa14.3□□□□□ -0.12
CDK7-208ENST00000512687 ANKLE1Q8NAG6 615 aa14.3□□□□□ -0.12
CDK7-208ENST00000512687 MKL1Q969V6 931 aa14.3□□□□□ -0.12
CDK7-208ENST00000512687 RILPL2Q969X0 211 aa14.3□□□□□ -0.12
CDK7-208ENST00000512687 OSBPL3Q9H4L5 887 aa14.3□□□□□ -0.12
CDK7-208ENST00000512687 ZNF287Q9HBT7 754 aa14.3□□□□□ -0.12
CDK7-208ENST00000512687 TRIOBPQ9H2D6 2365 aa14.3□□□□□ -0.12
CDK7-208ENST00000512687 TRIM6-TRIM34B2RNG4 842 aa14.29□□□□□ -0.12
CDK7-208ENST00000512687 NMT2O60551 498 aa14.29□□□□□ -0.12
CDK7-208ENST00000512687 TTLL1O95922 423 aa14.29□□□□□ -0.12
CDK7-208ENST00000512687 TSPY3P0CV98 308 aa14.29□□□□□ -0.12
CDK7-208ENST00000512687 TSPY8P0CW00 308 aa14.29□□□□□ -0.12
CDK7-208ENST00000512687 CAPN2P17655 700 aa14.29□□□□□ -0.12
CDK7-208ENST00000512687 ALX1Q15699 326 aa14.29□□□□□ -0.12
CDK7-208ENST00000512687 MCMDC2Q4G0Z9 681 aa14.29□□□□□ -0.12
CDK7-208ENST00000512687 HABP4Q5JVS0 413 aaKnown RBP14.29□□□□□ -0.12
CDK7-208ENST00000512687 MFSD14CQ5VZR4 134 aa14.29□□□□□ -0.12
CDK7-208ENST00000512687 RASGRP2Q7LDG7 609 aa14.29□□□□□ -0.12
CDK7-208ENST00000512687 RIOX2Q8IUF8 465 aa14.29□□□□□ -0.12
CDK7-208ENST00000512687 SLF1Q9BQI6 1058 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms