RNA–Protein interactions for RNA: ENST00000512620.5

CAST-238, Transcript of calpastatin, human

TSL 5

Gene CAST, Length 904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-238	ENST00000512620	NBPF12	Q5TAG4	269 aa	Predicted RBP	4.94	□□□□□ -1.62
CAST-238	ENST00000512620	YOD1	Q5VVQ6	348 aa	Predicted RBP	4.94	□□□□□ -1.62
CAST-238	ENST00000512620	SEZ6L2	Q6UXD5	910 aa		4.94	□□□□□ -1.62
CAST-238	ENST00000512620	FBXL6	Q8N531	539 aa		4.94	□□□□□ -1.62
CAST-238	ENST00000512620	ZCRB1	Q8TBF4	217 aa	Known RBP	4.94	□□□□□ -1.62
CAST-238	ENST00000512620	EZH1	Q92800	747 aa	Predicted RBP	4.94	□□□□□ -1.62
CAST-238	ENST00000512620	BRF1	Q92994	677 aa		4.94	□□□□□ -1.62
CAST-238	ENST00000512620	FMNL2	Q96PY5	1086 aa		4.94	□□□□□ -1.62
CAST-238	ENST00000512620	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	4.94	□□□□□ -1.62
CAST-238	ENST00000512620	SLK	Q9H2G2	1235 aa	Predicted RBP	4.94	□□□□□ -1.62
CAST-238	ENST00000512620	TMX1	Q9H3N1	280 aa		4.94	□□□□□ -1.62
CAST-238	ENST00000512620	LRP2BP	Q9P2M1	347 aa		4.94	□□□□□ -1.62
CAST-238	ENST00000512620	FBXL21	Q9UKT6	434 aa		4.94	□□□□□ -1.62
CAST-238	ENST00000512620	SUGT1	Q9Y2Z0	365 aa		4.94	□□□□□ -1.62
CAST-238	ENST00000512620	ZNF451	Q9Y4E5	1061 aa		4.94	□□□□□ -1.62
CAST-238	ENST00000512620	PTCH2	Q9Y6C5	1203 aa		4.94	□□□□□ -1.62
CAST-238	ENST00000512620	MEIS1	O00470	390 aa		4.93	□□□□□ -1.62
CAST-238	ENST00000512620	SHOX	O15266	292 aa		4.93	□□□□□ -1.62
CAST-238	ENST00000512620	DHX15	O43143	795 aa	Known RBP	4.93	□□□□□ -1.62
CAST-238	ENST00000512620	TBX1	O43435	398 aa		4.93	□□□□□ -1.62
CAST-238	ENST00000512620	CDC45	O75419	566 aa		4.93	□□□□□ -1.62
CAST-238	ENST00000512620	EOMES	O95936	686 aa		4.93	□□□□□ -1.62
CAST-238	ENST00000512620	CCNF	P41002	786 aa		4.93	□□□□□ -1.62
CAST-238	ENST00000512620	BBS9	Q3SYG4	887 aa		4.93	□□□□□ -1.62
CAST-238	ENST00000512620	C2orf27A	Q580R0	203 aa		4.93	□□□□□ -1.62
CAST-238	ENST00000512620	TAF7L	Q5H9L4	462 aa		4.93	□□□□□ -1.62
CAST-238	ENST00000512620	FOXB2	Q5VYV0	432 aa		4.93	□□□□□ -1.62
CAST-238	ENST00000512620	PAOX	Q6QHF9	649 aa		4.93	□□□□□ -1.62
CAST-238	ENST00000512620	LRRN4CL	Q8ND94	238 aa		4.93	□□□□□ -1.62
CAST-238	ENST00000512620	ST13P5	Q8NFI4	369 aa	Predicted RBP	4.93	□□□□□ -1.62
CAST-238	ENST00000512620	TBC1D32	Q96NH3	1257 aa		4.93	□□□□□ -1.62
CAST-238	ENST00000512620	DUSP23	Q9BVJ7	150 aa		4.93	□□□□□ -1.62
CAST-238	ENST00000512620	SPATA9	Q9BWV2	254 aa		4.93	□□□□□ -1.62
CAST-238	ENST00000512620	KLHL25	Q9H0H3	589 aa		4.93	□□□□□ -1.62
CAST-238	ENST00000512620	CWC22	Q9HCG8	908 aa	Known RBP	4.93	□□□□□ -1.62
CAST-238	ENST00000512620	hCG_2014768	A0A024R1R8	64 aa		4.92	□□□□□ -1.62
CAST-238	ENST00000512620	ANKRD34B	A5PLL1	514 aa		4.92	□□□□□ -1.62
CAST-238	ENST00000512620	FAM170B	A6NMN3	283 aa		4.92	□□□□□ -1.62
CAST-238	ENST00000512620	PRR33	A8MZF0	331 aa		4.92	□□□□□ -1.62
CAST-238	ENST00000512620	PPP1R12A	O14974	1030 aa	Predicted RBP	4.92	□□□□□ -1.62
CAST-238	ENST00000512620	L1CAM	P32004	1257 aa		4.92	□□□□□ -1.62
CAST-238	ENST00000512620	GRIA2	P42262	883 aa		4.92	□□□□□ -1.62
CAST-238	ENST00000512620	AUH	Q13825	339 aa	Known RBP	4.92	□□□□□ -1.62
CAST-238	ENST00000512620	PPP2R5D	Q14738	602 aa		4.92	□□□□□ -1.62
CAST-238	ENST00000512620	PTPRO	Q16827	1216 aa		4.92	□□□□□ -1.62
CAST-238	ENST00000512620	UVSSA	Q2YD98	709 aa		4.92	□□□□□ -1.62
CAST-238	ENST00000512620	TKFC	Q3LXA3	575 aa		4.92	□□□□□ -1.62
CAST-238	ENST00000512620	TMC3	Q7Z5M5	1100 aa		4.92	□□□□□ -1.62
CAST-238	ENST00000512620	VWCE	Q96DN2	955 aa		4.92	□□□□□ -1.62
CAST-238	ENST00000512620	MFSD14A	Q96MC6	490 aa		4.92	□□□□□ -1.62
CAST-238	ENST00000512620	APBA2	Q99767	749 aa		4.92	□□□□□ -1.62
CAST-238	ENST00000512620	C7orf69	Q9H7B7	122 aa		4.92	□□□□□ -1.62
CAST-238	ENST00000512620		A0A1W2PQU0	124 aa		4.91	□□□□□ -1.62
CAST-238	ENST00000512620	ADCY3	O60266	1144 aa		4.91	□□□□□ -1.62
CAST-238	ENST00000512620	ASMTL	O95671	621 aa		4.91	□□□□□ -1.62
CAST-238	ENST00000512620	ITGAV	P06756	1048 aa		4.91	□□□□□ -1.62
CAST-238	ENST00000512620	YBX3	P16989	372 aa	Known RBP eCLIP	4.91	□□□□□ -1.62	5e-8	■■■□□ 18.2
CAST-238	ENST00000512620	CD247	P20963	164 aa		4.91	□□□□□ -1.62
CAST-238	ENST00000512620	ETV3	P41162	512 aa		4.91	□□□□□ -1.62
CAST-238	ENST00000512620	ANAPC15	P60006	121 aa		4.91	□□□□□ -1.62
CAST-238	ENST00000512620	IGBP1	P78318	339 aa		4.91	□□□□□ -1.62
CAST-238	ENST00000512620	NOL9	Q5SY16	702 aa	Known RBP	4.91	□□□□□ -1.62
CAST-238	ENST00000512620	PRR23C	Q6ZRP0	262 aa		4.91	□□□□□ -1.62
CAST-238	ENST00000512620	C7orf61	Q8IZ16	206 aa		4.91	□□□□□ -1.62
CAST-238	ENST00000512620	THAP3	Q8WTV1	239 aa	Predicted RBP	4.91	□□□□□ -1.62
CAST-238	ENST00000512620	APPBP2	Q92624	585 aa		4.91	□□□□□ -1.62
CAST-238	ENST00000512620	BRINP2	Q9C0B6	783 aa		4.91	□□□□□ -1.62
CAST-238	ENST00000512620	PRDM14	Q9GZV8	571 aa		4.91	□□□□□ -1.62
CAST-238	ENST00000512620	NOL6	Q9H6R4	1146 aa	Known RBP	4.91	□□□□□ -1.62
CAST-238	ENST00000512620	GP6	Q9HCN6	339 aa		4.91	□□□□□ -1.62
CAST-238	ENST00000512620	GFOD1	Q9NXC2	390 aa		4.91	□□□□□ -1.62
CAST-238	ENST00000512620	PRKAB1	Q9Y478	270 aa		4.91	□□□□□ -1.62
CAST-238	ENST00000512620		U3KQE9	123 aa		4.91	□□□□□ -1.62
CAST-238	ENST00000512620	SHISA3	A0PJX4	238 aa		4.9	□□□□□ -1.63
CAST-238	ENST00000512620	ZNF445	P59923	1031 aa		4.9	□□□□□ -1.63
CAST-238	ENST00000512620	PPP2R2A	P63151	447 aa		4.9	□□□□□ -1.63
CAST-238	ENST00000512620	RNF4	P78317	190 aa		4.9	□□□□□ -1.63
CAST-238	ENST00000512620	CBX2	Q14781	532 aa	Predicted RBP	4.9	□□□□□ -1.63
CAST-238	ENST00000512620	NBPF9	Q3BBW0	867 aa		4.9	□□□□□ -1.63
CAST-238	ENST00000512620	PLEKHG4	Q58EX7	1191 aa		4.9	□□□□□ -1.63
CAST-238	ENST00000512620	FAM209A	Q5JX71	171 aa		4.9	□□□□□ -1.63
CAST-238	ENST00000512620	ZNF765	Q7L2R6	523 aa		4.9	□□□□□ -1.63
CAST-238	ENST00000512620	ZNF227	Q86WZ6	799 aa		4.9	□□□□□ -1.63
CAST-238	ENST00000512620	HOMER1	Q86YM7	354 aa		4.9	□□□□□ -1.63
CAST-238	ENST00000512620	CLEC10A	Q8IUN9	316 aa		4.9	□□□□□ -1.63
CAST-238	ENST00000512620	ZNF513	Q8N8E2	541 aa	Predicted RBP	4.9	□□□□□ -1.63
CAST-238	ENST00000512620	FAM181A	Q8N9Y4	354 aa		4.9	□□□□□ -1.63
CAST-238	ENST00000512620	RNF141	Q8WVD5	230 aa		4.9	□□□□□ -1.63
CAST-238	ENST00000512620	GATA6	Q92908	595 aa		4.9	□□□□□ -1.63
CAST-238	ENST00000512620	SMARCC1	Q92922	1105 aa	Predicted RBP	4.9	□□□□□ -1.63
CAST-238	ENST00000512620	EXOC2	Q96KP1	924 aa		4.9	□□□□□ -1.63
CAST-238	ENST00000512620		Q96M66	194 aa		4.9	□□□□□ -1.63
CAST-238	ENST00000512620	HEXIM2	Q96MH2	286 aa	Known RBP	4.9	□□□□□ -1.63
CAST-238	ENST00000512620	ZDHHC15	Q96MV8	337 aa		4.9	□□□□□ -1.63
CAST-238	ENST00000512620	FAM83C	Q9BQN1	747 aa		4.9	□□□□□ -1.63
CAST-238	ENST00000512620	PRDM5	Q9NQX1	630 aa	Predicted RBP	4.9	□□□□□ -1.63
CAST-238	ENST00000512620	ARHGEF4	Q9NR80	690 aa		4.9	□□□□□ -1.63
CAST-238	ENST00000512620	TMEM260	Q9NX78	707 aa		4.9	□□□□□ -1.63
CAST-238	ENST00000512620	STOML1	Q9UBI4	398 aa		4.9	□□□□□ -1.63
CAST-238	ENST00000512620	RAX	Q9Y2V3	346 aa		4.9	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms