RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 CIAPIN1Q6FI81 312 aa9.41□□□□□ -0.9
HTT-209ENST00000512068 CDC42EP5Q6NZY7 148 aa9.41□□□□□ -0.9
HTT-209ENST00000512068 APOA5Q6Q788 366 aa9.41□□□□□ -0.9
HTT-209ENST00000512068 ZSCAN29Q8IWY8 852 aaPredicted RBP9.41□□□□□ -0.9
HTT-209ENST00000512068 TRIM22Q8IYM9 498 aa9.41□□□□□ -0.9
HTT-209ENST00000512068 CRACR2BQ8N4Y2 399 aaPredicted RBP9.41□□□□□ -0.9
HTT-209ENST00000512068 NSUN7Q8NE18 718 aaKnown RBP9.41□□□□□ -0.9
HTT-209ENST00000512068 IGDCC4Q8TDY8 1250 aa9.41□□□□□ -0.9
HTT-209ENST00000512068 WASF1Q92558 559 aa9.41□□□□□ -0.9
HTT-209ENST00000512068 OSBPL5Q9H0X9 879 aaPredicted RBP9.41□□□□□ -0.9
HTT-209ENST00000512068 KAT14Q9H8E8 782 aa9.41□□□□□ -0.9
HTT-209ENST00000512068 NCOA5Q9HCD5 579 aaKnown RBP9.41□□□□□ -0.9
HTT-209ENST00000512068 INCENPQ9NQS7 918 aa9.41□□□□□ -0.9
HTT-209ENST00000512068 KCNQ5Q9NR82 932 aa9.41□□□□□ -0.9
HTT-209ENST00000512068 RBM28Q9NW13 759 aaKnown RBP9.41□□□□□ -0.9
HTT-209ENST00000512068 HCSTQ9UBK5 93 aa9.41□□□□□ -0.9
HTT-209ENST00000512068 SWAP70Q9UH65 585 aa9.41□□□□□ -0.9
HTT-209ENST00000512068 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.41□□□□□ -0.9
HTT-209ENST00000512068 ADAMTSL1Q8N6G6 1762 aa9.41□□□□□ -0.9
HTT-209ENST00000512068 DDX60LQ5H9U9 1706 aaKnown RBP9.41□□□□□ -0.9
HTT-209ENST00000512068 MYH6P13533 1939 aa9.41□□□□□ -0.9
HTT-209ENST00000512068 LTBP3Q9NS15 1303 aa9.4□□□□□ -0.9
HTT-209ENST00000512068 YDJCA8MPS7 323 aa9.4□□□□□ -0.9
HTT-209ENST00000512068 JAK2O60674 1132 aa9.4□□□□□ -0.9
HTT-209ENST00000512068 DDAH1O94760 285 aa9.4□□□□□ -0.9
HTT-209ENST00000512068 BAG4O95429 457 aaKnown RBP9.4□□□□□ -0.9
HTT-209ENST00000512068 F13A1P00488 732 aa9.4□□□□□ -0.9
HTT-209ENST00000512068 VIL1P09327 827 aaKnown RBP9.4□□□□□ -0.9
HTT-209ENST00000512068 FGRP09769 529 aa9.4□□□□□ -0.9
HTT-209ENST00000512068 MMP14P50281 582 aa9.4□□□□□ -0.9
HTT-209ENST00000512068 TFAP4Q01664 338 aa9.4□□□□□ -0.9
HTT-209ENST00000512068 SSRP1Q08945 709 aaKnown RBP9.4□□□□□ -0.9
HTT-209ENST00000512068 ST3GAL1Q11201 340 aa9.4□□□□□ -0.9
HTT-209ENST00000512068 PKP1Q13835 747 aa9.4□□□□□ -0.9
HTT-209ENST00000512068 DLGAP5Q15398 846 aa9.4□□□□□ -0.9
HTT-209ENST00000512068 SKOR2Q2VWA4 1001 aaPredicted RBP9.4□□□□□ -0.9
HTT-209ENST00000512068 BRICD5Q6PL45 260 aa9.4□□□□□ -0.9
HTT-209ENST00000512068 C16orf86Q6ZW13 317 aa9.4□□□□□ -0.9
HTT-209ENST00000512068 RAB11FIP4Q86YS3 637 aa9.4□□□□□ -0.9
HTT-209ENST00000512068 CCDC144CPQ8IYA2 1237 aa9.4□□□□□ -0.9
HTT-209ENST00000512068 ZNF654Q8IZM8 581 aa9.4□□□□□ -0.9
HTT-209ENST00000512068 BANK1Q8NDB2 785 aa9.4□□□□□ -0.9
HTT-209ENST00000512068 AGBL3Q8NEM8 1001 aa9.4□□□□□ -0.9
HTT-209ENST00000512068 CTCFLQ8NI51 663 aaPredicted RBP9.4□□□□□ -0.9
HTT-209ENST00000512068 SMARCC2Q8TAQ2 1214 aa9.4□□□□□ -0.9
HTT-209ENST00000512068 THAP11Q96EK4 314 aa9.4□□□□□ -0.9
HTT-209ENST00000512068 DYNLL2Q96FJ2 89 aa9.4□□□□□ -0.9
HTT-209ENST00000512068 DHX36Q9H2U1 1008 aaKnown RBP9.4□□□□□ -0.9
HTT-209ENST00000512068 ORC3Q9UBD5 711 aaPredicted RBP9.4□□□□□ -0.9
HTT-209ENST00000512068 MKRN1Q9UHC7 482 aaKnown RBP9.4□□□□□ -0.9
HTT-209ENST00000512068 BRPF3Q9ULD4 1205 aa9.4□□□□□ -0.9
HTT-209ENST00000512068 ZNF646O15015 1829 aaPredicted RBP9.4□□□□□ -0.91
HTT-209ENST00000512068 RXRAP19793 462 aa9.39□□□□□ -0.91
HTT-209ENST00000512068 KIF5BP33176 963 aa9.39□□□□□ -0.91
HTT-209ENST00000512068 CDK8P49336 464 aa9.39□□□□□ -0.91
HTT-209ENST00000512068 GNL2Q13823 731 aaKnown RBP9.39□□□□□ -0.91
HTT-209ENST00000512068 FAM47AQ5JRC9 791 aa9.39□□□□□ -0.91
HTT-209ENST00000512068 APOBEC3HQ6NTF7 200 aaKnown RBP9.39□□□□□ -0.91
HTT-209ENST00000512068 C8orf76Q96K31 380 aa9.39□□□□□ -0.91
HTT-209ENST00000512068 SERPINB13Q9UIV8 391 aa9.39□□□□□ -0.91
HTT-209ENST00000512068 WDHD1O75717 1129 aaPredicted RBP9.38□□□□□ -0.91
HTT-209ENST00000512068 XBP1P17861 261 aa9.38□□□□□ -0.91
HTT-209ENST00000512068 RPS12P25398 132 aaKnown RBP9.38□□□□□ -0.91
HTT-209ENST00000512068 TNNI2P48788 182 aa9.38□□□□□ -0.91
HTT-209ENST00000512068 PLCD1P51178 756 aa9.38□□□□□ -0.91
HTT-209ENST00000512068 FOXD4L6Q3SYB3 417 aaPredicted RBP9.38□□□□□ -0.91
HTT-209ENST00000512068 TJAP1Q5JTD0 557 aa9.38□□□□□ -0.91
HTT-209ENST00000512068 FOXD4L3Q6VB84 417 aaPredicted RBP9.38□□□□□ -0.91
HTT-209ENST00000512068 RNF19BQ6ZMZ0 732 aa9.38□□□□□ -0.91
HTT-209ENST00000512068 CLEC17AQ6ZS10 378 aa9.38□□□□□ -0.91
HTT-209ENST00000512068 RETREG3Q86VR2 466 aa9.38□□□□□ -0.91
HTT-209ENST00000512068 DGKHQ86XP1 1220 aa9.38□□□□□ -0.91
HTT-209ENST00000512068 ENAHQ8N8S7 591 aaPredicted RBP9.38□□□□□ -0.91
HTT-209ENST00000512068 SYMPKQ92797 1274 aaKnown RBP9.38□□□□□ -0.91
HTT-209ENST00000512068 MTRQ99707 1265 aa9.38□□□□□ -0.91
HTT-209ENST00000512068 MYL10Q9BUA6 226 aa9.38□□□□□ -0.91
HTT-209ENST00000512068 IDI2Q9BXS1 227 aa9.38□□□□□ -0.91
HTT-209ENST00000512068 SLC26A6Q9BXS9 759 aa9.38□□□□□ -0.91
HTT-209ENST00000512068 ZSCAN16Q9H4T2 348 aaPredicted RBP9.38□□□□□ -0.91
HTT-209ENST00000512068 STX8Q9UNK0 236 aa9.38□□□□□ -0.91
HTT-209ENST00000512068 MTMR6Q9Y217 621 aa9.38□□□□□ -0.91
HTT-209ENST00000512068 TACC3Q9Y6A5 838 aa9.38□□□□□ -0.91
HTT-209ENST00000512068 NID2Q14112 1375 aa9.37□□□□□ -0.91
HTT-209ENST00000512068 STK36Q9NRP7 1315 aa9.37□□□□□ -0.91
HTT-209ENST00000512068 MPHOSPH10O00566 681 aaKnown RBP9.37□□□□□ -0.91
HTT-209ENST00000512068 ENTPD3O75355 529 aa9.37□□□□□ -0.91
HTT-209ENST00000512068 FMNL1O95466 1100 aaPredicted RBP9.37□□□□□ -0.91
HTT-209ENST00000512068 GNAQP50148 359 aa9.37□□□□□ -0.91
HTT-209ENST00000512068 COPS2P61201 443 aa9.37□□□□□ -0.91
HTT-209ENST00000512068 KRT85P78386 507 aa9.37□□□□□ -0.91
HTT-209ENST00000512068 RASSF7Q02833 373 aa9.37□□□□□ -0.91
HTT-209ENST00000512068 CXCL9Q07325 125 aa9.37□□□□□ -0.91
HTT-209ENST00000512068 TCP10Q12799 353 aa9.37□□□□□ -0.91
HTT-209ENST00000512068 SAFBQ15424 915 aaKnown RBP eCLIP9.37□□□□□ -0.91
HTT-209ENST00000512068 SEC23AQ15436 765 aa9.37□□□□□ -0.91
HTT-209ENST00000512068 ARHGAP27Q6ZUM4 889 aa9.37□□□□□ -0.91
HTT-209ENST00000512068 CDC37L1Q7L3B6 337 aa9.37□□□□□ -0.91
HTT-209ENST00000512068 FANCBQ8NB91 859 aa9.37□□□□□ -0.91
HTT-209ENST00000512068 SLC44A5Q8NCS7 719 aa9.37□□□□□ -0.91
HTT-209ENST00000512068 NLGN2Q8NFZ4 835 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms