RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 TBC1D31Q96DN5 1066 aa12.06□□□□□ -0.48
CPNE4-209ENST00000512055 PSMA7O14818 248 aa12.05□□□□□ -0.48
CPNE4-209ENST00000512055 TMED1Q13445 227 aa12.05□□□□□ -0.48
CPNE4-209ENST00000512055 TTC38Q5R3I4 469 aa12.05□□□□□ -0.48
CPNE4-209ENST00000512055 TCERG1LQ5VWI1 586 aa12.05□□□□□ -0.48
CPNE4-209ENST00000512055 SDCCAG8Q86SQ7 713 aaPredicted RBP12.05□□□□□ -0.48
CPNE4-209ENST00000512055 PUF60Q9UHX1 559 aaKnown RBP12.05□□□□□ -0.48
CPNE4-209ENST00000512055 PARP3Q9Y6F1 533 aa12.05□□□□□ -0.48
CPNE4-209ENST00000512055 CARMIL3Q8ND23 1372 aa12.05□□□□□ -0.48
CPNE4-209ENST00000512055 RASGRF1Q13972 1273 aa12.05□□□□□ -0.48
CPNE4-209ENST00000512055 TACC3Q9Y6A5 838 aa12.05□□□□□ -0.48
CPNE4-209ENST00000512055 AKR1B10O60218 316 aa12.05□□□□□ -0.48
CPNE4-209ENST00000512055 FANCCQ00597 558 aa12.05□□□□□ -0.48
CPNE4-209ENST00000512055 ERCC6LQ2NKX8 1250 aa12.05□□□□□ -0.48
CPNE4-209ENST00000512055 MUM1Q2TAK8 710 aa12.05□□□□□ -0.48
CPNE4-209ENST00000512055 IFT81Q8WYA0 676 aa12.05□□□□□ -0.48
CPNE4-209ENST00000512055 CTAGE1Q96RT6 745 aa12.05□□□□□ -0.48
CPNE4-209ENST00000512055 VEZTQ9HBM0 779 aa12.05□□□□□ -0.48
CPNE4-209ENST00000512055 GJB4Q9NTQ9 266 aa12.05□□□□□ -0.48
CPNE4-209ENST00000512055 GNA11P29992 359 aa12.05□□□□□ -0.48
CPNE4-209ENST00000512055 DYNLL1P63167 89 aaKnown RBP12.05□□□□□ -0.48
CPNE4-209ENST00000512055 CFAP157Q5JU67 520 aa12.05□□□□□ -0.48
CPNE4-209ENST00000512055 HDXQ7Z353 690 aa12.05□□□□□ -0.48
CPNE4-209ENST00000512055 NOSTRINQ8IVI9 506 aa12.05□□□□□ -0.48
CPNE4-209ENST00000512055 LCORLQ8N3X6 602 aa12.05□□□□□ -0.48
CPNE4-209ENST00000512055 AIFM3Q96NN9 605 aa12.05□□□□□ -0.48
CPNE4-209ENST00000512055 ITSN1Q15811 1721 aa12.05□□□□□ -0.48
CPNE4-209ENST00000512055 ERVV-1B6SEH8 477 aa12.04□□□□□ -0.48
CPNE4-209ENST00000512055 CCT6AP40227 531 aaKnown RBP12.04□□□□□ -0.48
CPNE4-209ENST00000512055 ZNF131P52739 623 aa12.04□□□□□ -0.48
CPNE4-209ENST00000512055 PDIA6Q15084 440 aa12.04□□□□□ -0.48
CPNE4-209ENST00000512055 ZSCAN10Q96SZ4 725 aaPredicted RBP12.04□□□□□ -0.48
CPNE4-209ENST00000512055 BAG1Q99933 345 aaPredicted RBP12.04□□□□□ -0.48
CPNE4-209ENST00000512055 KIAA1468Q9P260 1216 aa12.04□□□□□ -0.48
CPNE4-209ENST00000512055 ATP2A2P16615 1042 aaKnown RBP12.04□□□□□ -0.48
CPNE4-209ENST00000512055 NLRP12P59046 1061 aa12.04□□□□□ -0.48
CPNE4-209ENST00000512055 KARSQ15046 597 aaKnown RBP12.04□□□□□ -0.48
CPNE4-209ENST00000512055 SYT10Q6XYQ8 523 aa12.04□□□□□ -0.48
CPNE4-209ENST00000512055 VSIG1Q86XK7 387 aa12.04□□□□□ -0.48
CPNE4-209ENST00000512055 TRMT44Q8IYL2 757 aaKnown RBP12.04□□□□□ -0.48
CPNE4-209ENST00000512055 ANLNQ9NQW6 1124 aa12.04□□□□□ -0.48
CPNE4-209ENST00000512055 MED23Q9ULK4 1368 aa12.04□□□□□ -0.48
CPNE4-209ENST00000512055 TERF1P54274 439 aa12.04□□□□□ -0.48
CPNE4-209ENST00000512055 LRMPQ12912 555 aa12.04□□□□□ -0.48
CPNE4-209ENST00000512055 CABS1Q96KC9 395 aa12.04□□□□□ -0.48
CPNE4-209ENST00000512055 SSX2IPQ9Y2D8 614 aa12.04□□□□□ -0.48
CPNE4-209ENST00000512055 CAPZA3Q96KX2 299 aa12.04□□□□□ -0.48
CPNE4-209ENST00000512055 CTAGE9A4FU28 777 aa12.04□□□□□ -0.48
CPNE4-209ENST00000512055 HSPA1LP34931 641 aa12.04□□□□□ -0.48
CPNE4-209ENST00000512055 SF3A3Q12874 501 aaKnown RBP eCLIP12.04□□□□□ -0.48
CPNE4-209ENST00000512055 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.04□□□□□ -0.48
CPNE4-209ENST00000512055 UIMC1Q96RL1 719 aa12.04□□□□□ -0.48
CPNE4-209ENST00000512055 RIPOR2Q9Y4F9 1068 aa12.04□□□□□ -0.48
CPNE4-209ENST00000512055 LRRD1A4D1F6 860 aa12.03□□□□□ -0.48
CPNE4-209ENST00000512055 PPARDQ03181 441 aa12.03□□□□□ -0.48
CPNE4-209ENST00000512055 SPAG1Q07617 926 aa12.03□□□□□ -0.48
CPNE4-209ENST00000512055 SCARF1Q14162 830 aa12.03□□□□□ -0.48
CPNE4-209ENST00000512055 VCX3AQ9NNX9 186 aa12.03□□□□□ -0.48
CPNE4-209ENST00000512055 SRP68Q9UHB9 627 aaKnown RBP12.03□□□□□ -0.48
CPNE4-209ENST00000512055 SERTAD1Q9UHV2 236 aa12.03□□□□□ -0.48
CPNE4-209ENST00000512055 CAPN7Q9Y6W3 813 aa12.03□□□□□ -0.48
CPNE4-209ENST00000512055 ZRANB2O95218 330 aaKnown RBP eCLIP12.03□□□□□ -0.48
CPNE4-209ENST00000512055 LZTFL1Q9NQ48 299 aa12.03□□□□□ -0.48
CPNE4-209ENST00000512055 KIF20BQ96Q89 1820 aa12.03□□□□□ -0.48
CPNE4-209ENST00000512055 CYP2D7A0A087X1C5 515 aa12.03□□□□□ -0.48
CPNE4-209ENST00000512055 CYP2E1P05181 493 aaPredicted RBP12.03□□□□□ -0.48
CPNE4-209ENST00000512055 BIRC2Q13490 618 aa12.03□□□□□ -0.48
CPNE4-209ENST00000512055 POSTNQ15063 836 aa12.03□□□□□ -0.48
CPNE4-209ENST00000512055 ATG9AQ7Z3C6 839 aa12.03□□□□□ -0.48
CPNE4-209ENST00000512055 STAG1Q8WVM7 1258 aa12.03□□□□□ -0.48
CPNE4-209ENST00000512055 ISCA1Q9BUE6 129 aa12.03□□□□□ -0.48
CPNE4-209ENST00000512055 ZSWIM5Q9P217 1185 aa12.03□□□□□ -0.48
CPNE4-209ENST00000512055 RASAL2Q9UJF2 1139 aa12.03□□□□□ -0.48
CPNE4-209ENST00000512055 SATB2Q9UPW6 733 aa12.03□□□□□ -0.48
CPNE4-209ENST00000512055 NFE2L3Q9Y4A8 694 aa12.03□□□□□ -0.48
CPNE4-209ENST00000512055 CYP19A1P11511 503 aaPredicted RBP12.03□□□□□ -0.48
CPNE4-209ENST00000512055 KRT13P13646 458 aa12.03□□□□□ -0.48
CPNE4-209ENST00000512055 MFSD14BQ5SR56 506 aa12.03□□□□□ -0.48
CPNE4-209ENST00000512055 CTNND2Q9UQB3 1225 aa12.03□□□□□ -0.48
CPNE4-209ENST00000512055 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.03□□□□□ -0.48
CPNE4-209ENST00000512055 GTF2IP78347 998 aa12.02□□□□□ -0.48
CPNE4-209ENST00000512055 UBXN1Q04323 297 aa12.02□□□□□ -0.48
CPNE4-209ENST00000512055 IRAK4Q9NWZ3 460 aa12.02□□□□□ -0.48
CPNE4-209ENST00000512055 RESTQ13127 1097 aa12.02□□□□□ -0.49
CPNE4-209ENST00000512055 TNIP1Q15025 636 aa12.02□□□□□ -0.49
CPNE4-209ENST00000512055 ZNF827Q17R98 1081 aa12.02□□□□□ -0.49
CPNE4-209ENST00000512055 RABL6Q3YEC7 729 aaPredicted RBP12.02□□□□□ -0.49
CPNE4-209ENST00000512055 KRT79Q5XKE5 535 aa12.02□□□□□ -0.49
CPNE4-209ENST00000512055 CCDC65Q8IXS2 484 aa12.02□□□□□ -0.49
CPNE4-209ENST00000512055 OGFOD1Q8N543 542 aa12.02□□□□□ -0.49
CPNE4-209ENST00000512055 XPO4Q9C0E2 1151 aaKnown RBP12.02□□□□□ -0.49
CPNE4-209ENST00000512055 ZNF804BA4D1E1 1349 aa12.02□□□□□ -0.49
CPNE4-209ENST00000512055 VAV2P52735 878 aa12.02□□□□□ -0.49
CPNE4-209ENST00000512055 ZSCAN26Q16670 478 aa12.02□□□□□ -0.49
CPNE4-209ENST00000512055 SPAG5Q96R06 1193 aa12.02□□□□□ -0.49
CPNE4-209ENST00000512055 VPS16Q9H269 839 aa12.02□□□□□ -0.49
CPNE4-209ENST00000512055 GFAPP14136 432 aa12.02□□□□□ -0.49
CPNE4-209ENST00000512055 CCDC122Q5T0U0 273 aa12.02□□□□□ -0.49
CPNE4-209ENST00000512055 STK38LQ9Y2H1 464 aa12.02□□□□□ -0.49
CPNE4-209ENST00000512055 SAMM50Q9Y512 469 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms