RNA–Protein interactions for RNA: ENST00000511914.1

HOXA4-203, Transcript of homeobox A4, humanhuman

TSL 1 (best)

Gene HOXA4, Length 982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-203ENST00000511914 IFIT3O14879 490 aaKnown RBP12.16□□□□□ -0.46
HOXA4-203ENST00000511914 PSMC4P43686 418 aa12.16□□□□□ -0.46
HOXA4-203ENST00000511914 ST3GAL1Q11201 340 aa12.16□□□□□ -0.46
HOXA4-203ENST00000511914 SYNE3Q6ZMZ3 975 aa12.16□□□□□ -0.46
HOXA4-203ENST00000511914 TTC6Q86TZ1 520 aa12.16□□□□□ -0.46
HOXA4-203ENST00000511914 NECAB1Q8N987 351 aa12.16□□□□□ -0.46
HOXA4-203ENST00000511914 SMARCC2Q8TAQ2 1214 aa12.16□□□□□ -0.46
HOXA4-203ENST00000511914 DPF3Q92784 378 aa12.16□□□□□ -0.46
HOXA4-203ENST00000511914 TNPO1Q92973 898 aaKnown RBP12.16□□□□□ -0.46
HOXA4-203ENST00000511914 HOOK2Q96ED9 719 aa12.16□□□□□ -0.46
HOXA4-203ENST00000511914 UBAC1Q9BSL1 405 aa12.16□□□□□ -0.46
HOXA4-203ENST00000511914 LRRC2Q9BYS8 371 aa12.16□□□□□ -0.46
HOXA4-203ENST00000511914 LY9Q9HBG7 655 aa12.16□□□□□ -0.46
HOXA4-203ENST00000511914 TCP11L1Q9NUJ3 509 aa12.16□□□□□ -0.46
HOXA4-203ENST00000511914 TACC3Q9Y6A5 838 aa12.16□□□□□ -0.46
HOXA4-203ENST00000511914 NID2Q14112 1375 aa12.16□□□□□ -0.46
HOXA4-203ENST00000511914 SZT2Q5T011 3432 aa12.15□□□□□ -0.46
HOXA4-203ENST00000511914 FLT1P17948 1338 aa12.15□□□□□ -0.46
HOXA4-203ENST00000511914 KLF18A0A0U1RQI7 1052 aa12.15□□□□□ -0.46
HOXA4-203ENST00000511914 CCDC196A0A1B0GTZ2 297 aa12.15□□□□□ -0.46
HOXA4-203ENST00000511914 FMNL1O95466 1100 aaPredicted RBP12.15□□□□□ -0.46
HOXA4-203ENST00000511914 POLR3DP05423 398 aaPredicted RBP12.15□□□□□ -0.46
HOXA4-203ENST00000511914 OSBPP22059 807 aa12.15□□□□□ -0.46
HOXA4-203ENST00000511914 GJB2P29033 226 aa12.15□□□□□ -0.46
HOXA4-203ENST00000511914 PPATQ06203 517 aa12.15□□□□□ -0.46
HOXA4-203ENST00000511914 NFIAQ12857 509 aa12.15□□□□□ -0.46
HOXA4-203ENST00000511914 WTAPQ15007 396 aa12.15□□□□□ -0.46
HOXA4-203ENST00000511914 CPLX2Q6PUV4 134 aaKnown RBP12.15□□□□□ -0.46
HOXA4-203ENST00000511914 APOA5Q6Q788 366 aa12.15□□□□□ -0.46
HOXA4-203ENST00000511914 C17orf99Q6UX52 265 aa12.15□□□□□ -0.46
HOXA4-203ENST00000511914 CHST3Q7LGC8 479 aa12.15□□□□□ -0.46
HOXA4-203ENST00000511914 ZNF467Q7Z7K2 595 aaPredicted RBP12.15□□□□□ -0.46
HOXA4-203ENST00000511914 RAET1EQ8TD07 263 aa12.15□□□□□ -0.46
HOXA4-203ENST00000511914 ANKS1AQ92625 1134 aa12.15□□□□□ -0.46
HOXA4-203ENST00000511914 SHISA4Q96DD7 197 aa12.15□□□□□ -0.46
HOXA4-203ENST00000511914 TRIM47Q96LD4 638 aa12.15□□□□□ -0.46
HOXA4-203ENST00000511914 IDI2Q9BXS1 227 aa12.15□□□□□ -0.46
HOXA4-203ENST00000511914 ZCCHC17Q9NP64 241 aaKnown RBP12.15□□□□□ -0.46
HOXA4-203ENST00000511914 TOMM22Q9NS69 142 aa12.15□□□□□ -0.46
HOXA4-203ENST00000511914 USP40Q9NVE5 1235 aa12.15□□□□□ -0.46
HOXA4-203ENST00000511914 ATP6V1DQ9Y5K8 247 aa12.15□□□□□ -0.46
HOXA4-203ENST00000511914 PTPRFP10586 1907 aa12.15□□□□□ -0.46
HOXA4-203ENST00000511914 MYPNQ86TC9 1320 aa12.14□□□□□ -0.47
HOXA4-203ENST00000511914 CCDC69A6NI79 296 aa12.14□□□□□ -0.47
HOXA4-203ENST00000511914 DDX11L8A8MPP1 907 aa12.14□□□□□ -0.47
HOXA4-203ENST00000511914 GOLGA8BA8MQT2 603 aa12.14□□□□□ -0.47
HOXA4-203ENST00000511914 STX6O43752 255 aa12.14□□□□□ -0.47
HOXA4-203ENST00000511914 CDKL5O76039 1030 aa12.14□□□□□ -0.47
HOXA4-203ENST00000511914 GNRH1P01148 92 aa12.14□□□□□ -0.47
HOXA4-203ENST00000511914 SYT1P21579 422 aa12.14□□□□□ -0.47
HOXA4-203ENST00000511914 SCRN1Q12765 414 aa12.14□□□□□ -0.47
HOXA4-203ENST00000511914 SEC23AQ15436 765 aa12.14□□□□□ -0.47
HOXA4-203ENST00000511914 RRP12Q5JTH9 1297 aaKnown RBP12.14□□□□□ -0.47
HOXA4-203ENST00000511914 FKBP1CQ5VVH2 108 aa12.14□□□□□ -0.47
HOXA4-203ENST00000511914 CDC42EP5Q6NZY7 148 aa12.14□□□□□ -0.47
HOXA4-203ENST00000511914 C16orf86Q6ZW13 317 aa12.14□□□□□ -0.47
HOXA4-203ENST00000511914 ZSCAN10Q96SZ4 725 aaPredicted RBP12.14□□□□□ -0.47
HOXA4-203ENST00000511914 DHX36Q9H2U1 1008 aaKnown RBP12.14□□□□□ -0.47
HOXA4-203ENST00000511914 INCENPQ9NQS7 918 aa12.14□□□□□ -0.47
HOXA4-203ENST00000511914 BIN2Q9UBW5 565 aaPredicted RBP12.14□□□□□ -0.47
HOXA4-203ENST00000511914 SRRDQ9UH36 339 aa12.14□□□□□ -0.47
HOXA4-203ENST00000511914 BRPF3Q9ULD4 1205 aa12.14□□□□□ -0.47
HOXA4-203ENST00000511914 SLC12A7Q9Y666 1083 aa12.14□□□□□ -0.47
HOXA4-203ENST00000511914 PHIPQ8WWQ0 1821 aa12.14□□□□□ -0.47
HOXA4-203ENST00000511914 DOCK1Q14185 1865 aa12.13□□□□□ -0.47
HOXA4-203ENST00000511914 CYP2D7A0A087X1C5 515 aa12.13□□□□□ -0.47
HOXA4-203ENST00000511914 GOLGA6L22H0YM25 854 aa12.13□□□□□ -0.47
HOXA4-203ENST00000511914 ZBTB43O43298 467 aa12.13□□□□□ -0.47
HOXA4-203ENST00000511914 RANBP6O60518 1105 aaKnown RBP12.13□□□□□ -0.47
HOXA4-203ENST00000511914 CALM1P0DP23 149 aa12.13□□□□□ -0.47
HOXA4-203ENST00000511914 CALM2P0DP24 149 aa12.13□□□□□ -0.47
HOXA4-203ENST00000511914 CALM3P0DP25 149 aa12.13□□□□□ -0.47
HOXA4-203ENST00000511914 ZSCAN22P10073 491 aaPredicted RBP12.13□□□□□ -0.47
HOXA4-203ENST00000511914 CYP2C8P10632 490 aa12.13□□□□□ -0.47
HOXA4-203ENST00000511914 GRK4P32298 578 aa12.13□□□□□ -0.47
HOXA4-203ENST00000511914 MCM4P33991 863 aa12.13□□□□□ -0.47
HOXA4-203ENST00000511914 PRMT2P55345 433 aa12.13□□□□□ -0.47
HOXA4-203ENST00000511914 STK3Q13188 491 aa12.13□□□□□ -0.47
HOXA4-203ENST00000511914 GSE1Q14687 1217 aa12.13□□□□□ -0.47
HOXA4-203ENST00000511914 LARP1BQ659C4 914 aaKnown RBP12.13□□□□□ -0.47
HOXA4-203ENST00000511914 NFXL1Q6ZNB6 911 aa12.13□□□□□ -0.47
HOXA4-203ENST00000511914 ANKRD23Q86SG2 305 aa12.13□□□□□ -0.47
HOXA4-203ENST00000511914 DGKHQ86XP1 1220 aa12.13□□□□□ -0.47
HOXA4-203ENST00000511914 MAPKAPK5Q8IW41 473 aa12.13□□□□□ -0.47
HOXA4-203ENST00000511914 ZNF444Q8N0Y2 327 aaPredicted RBP12.13□□□□□ -0.47
HOXA4-203ENST00000511914 NSUN7Q8NE18 718 aaKnown RBP12.13□□□□□ -0.47
HOXA4-203ENST00000511914 FAM151AQ8WW52 585 aa12.13□□□□□ -0.47
HOXA4-203ENST00000511914 MAP3K14Q99558 947 aa12.13□□□□□ -0.47
HOXA4-203ENST00000511914 EHD4Q9H223 541 aa12.13□□□□□ -0.47
HOXA4-203ENST00000511914 MKNK2Q9HBH9 465 aa12.13□□□□□ -0.47
HOXA4-203ENST00000511914 SWAP70Q9UH65 585 aa12.13□□□□□ -0.47
HOXA4-203ENST00000511914 ZDHHC9Q9Y397 364 aa12.13□□□□□ -0.47
HOXA4-203ENST00000511914 ADGRA2Q96PE1 1338 aa12.12□□□□□ -0.47
HOXA4-203ENST00000511914 ATAD5Q96QE3 1844 aa12.12□□□□□ -0.47
HOXA4-203ENST00000511914 CPLX1O14810 134 aa12.12□□□□□ -0.47
HOXA4-203ENST00000511914 ENTPD3O75355 529 aa12.12□□□□□ -0.47
HOXA4-203ENST00000511914 CCL5P13501 91 aa12.12□□□□□ -0.47
HOXA4-203ENST00000511914 METAP2P50579 478 aaKnown RBP eCLIP12.12□□□□□ -0.47
HOXA4-203ENST00000511914 PRKCZQ05513 592 aa12.12□□□□□ -0.47
HOXA4-203ENST00000511914 GABPAQ06546 454 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms