RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 SLC25A27O95847 323 aa14.11□□□□□ -0.15
RNF4-216ENST00000511859 BMP1P13497 986 aa14.11□□□□□ -0.15
RNF4-216ENST00000511859 CYP7A1P22680 504 aa14.11□□□□□ -0.15
RNF4-216ENST00000511859 GUCY1A2P33402 732 aa14.11□□□□□ -0.15
RNF4-216ENST00000511859 ACLYP53396 1101 aa14.11□□□□□ -0.15
RNF4-216ENST00000511859 FAM9BQ8IZU0 186 aa14.11□□□□□ -0.15
RNF4-216ENST00000511859 TMEM199Q8N511 208 aa14.11□□□□□ -0.15
RNF4-216ENST00000511859 GPR108Q9NPR9 543 aa14.11□□□□□ -0.15
RNF4-216ENST00000511859 TBX21Q9UL17 535 aa14.11□□□□□ -0.15
RNF4-216ENST00000511859 ROBO3Q96MS0 1386 aa14.11□□□□□ -0.15
RNF4-216ENST00000511859 ADAMTS4O75173 837 aa14.1□□□□□ -0.15
RNF4-216ENST00000511859 SHMT1P34896 483 aa14.1□□□□□ -0.15
RNF4-216ENST00000511859 SEPT2Q15019 361 aa14.1□□□□□ -0.15
RNF4-216ENST00000511859 PSRC1Q6PGN9 363 aaPredicted RBP14.1□□□□□ -0.15
RNF4-216ENST00000511859 TMED8Q6PL24 325 aaPredicted RBP14.1□□□□□ -0.15
RNF4-216ENST00000511859 SLC28A3Q9HAS3 691 aa14.1□□□□□ -0.15
RNF4-216ENST00000511859 MUC6Q6W4X9 2439 aa14.1□□□□□ -0.15
RNF4-216ENST00000511859 ELP1O95163 1332 aa14.1□□□□□ -0.15
RNF4-216ENST00000511859 A0A1W2PRG0 241 aa14.09□□□□□ -0.15
RNF4-216ENST00000511859 ZNF865P0CJ78 1059 aaPredicted RBP14.09□□□□□ -0.15
RNF4-216ENST00000511859 CDK7P50613 346 aa14.09□□□□□ -0.15
RNF4-216ENST00000511859 ZNF365Q70YC5 407 aa14.09□□□□□ -0.15
RNF4-216ENST00000511859 KLHDC9Q8NEP7 349 aa14.09□□□□□ -0.15
RNF4-216ENST00000511859 GLT1D1Q96MS3 346 aa14.09□□□□□ -0.15
RNF4-216ENST00000511859 MMP19Q99542 508 aa14.09□□□□□ -0.15
RNF4-216ENST00000511859 CNPY2Q9Y2B0 182 aa14.09□□□□□ -0.15
RNF4-216ENST00000511859 A0A0G2JMZ2 1700 aa14.09□□□□□ -0.15
RNF4-216ENST00000511859 PRRC2BQ5JSZ5 2229 aaKnown RBP14.09□□□□□ -0.15
RNF4-216ENST00000511859 TRANK1O15050 2925 aa14.09□□□□□ -0.15
RNF4-216ENST00000511859 ANP32CO43423 234 aa14.09□□□□□ -0.15
RNF4-216ENST00000511859 FLOT1O75955 427 aa14.09□□□□□ -0.15
RNF4-216ENST00000511859 CT47B1P0C2W7 299 aaPredicted RBP14.09□□□□□ -0.15
RNF4-216ENST00000511859 CSF2RAP15509 400 aa14.09□□□□□ -0.15
RNF4-216ENST00000511859 ZAP70P43403 619 aa14.09□□□□□ -0.15
RNF4-216ENST00000511859 PLCD1P51178 756 aa14.09□□□□□ -0.15
RNF4-216ENST00000511859 SLFN5Q08AF3 891 aa14.09□□□□□ -0.15
RNF4-216ENST00000511859 KCTD2Q14681 263 aa14.09□□□□□ -0.15
RNF4-216ENST00000511859 KCNA10Q16322 511 aa14.09□□□□□ -0.15
RNF4-216ENST00000511859 ZNF792Q3KQV3 632 aa14.09□□□□□ -0.15
RNF4-216ENST00000511859 DIEXFQ68CQ4 756 aaKnown RBP14.09□□□□□ -0.15
RNF4-216ENST00000511859 CCSAPQ6IQ19 270 aaPredicted RBP14.09□□□□□ -0.15
RNF4-216ENST00000511859 MSL3Q8N5Y2 521 aaKnown RBP14.09□□□□□ -0.15
RNF4-216ENST00000511859 HERVK_113Q902F9 699 aa14.09□□□□□ -0.15
RNF4-216ENST00000511859 MTIF3Q9H2K0 278 aaKnown RBP14.09□□□□□ -0.15
RNF4-216ENST00000511859 MPHOSPH10O00566 681 aaKnown RBP14.08□□□□□ -0.16
RNF4-216ENST00000511859 POLR3DP05423 398 aaPredicted RBP14.08□□□□□ -0.16
RNF4-216ENST00000511859 TAL1P17542 331 aaPredicted RBP14.08□□□□□ -0.16
RNF4-216ENST00000511859 TNNI3KQ59H18 835 aa14.08□□□□□ -0.16
RNF4-216ENST00000511859 MIGA1Q8NAN2 632 aa14.08□□□□□ -0.16
RNF4-216ENST00000511859 LRFN3Q9BTN0 628 aa14.08□□□□□ -0.16
RNF4-216ENST00000511859 PIH1D3Q9NQM4 214 aaKnown RBP14.08□□□□□ -0.16
RNF4-216ENST00000511859 FAM184BQ9ULE4 1060 aa14.08□□□□□ -0.16
RNF4-216ENST00000511859 FPGT-TNNI3KV9GXZ4 949 aa14.08□□□□□ -0.16
RNF4-216ENST00000511859 GBF1Q92538 1859 aa14.07□□□□□ -0.16
RNF4-216ENST00000511859 IDH1O75874 414 aaKnown RBP14.07□□□□□ -0.16
RNF4-216ENST00000511859 GNAI2P04899 355 aa14.07□□□□□ -0.16
RNF4-216ENST00000511859 PGK2P07205 417 aa14.07□□□□□ -0.16
RNF4-216ENST00000511859 ACRP10323 421 aa14.07□□□□□ -0.16
RNF4-216ENST00000511859 COPB2P35606 906 aa14.07□□□□□ -0.16
RNF4-216ENST00000511859 GABPAQ06546 454 aa14.07□□□□□ -0.16
RNF4-216ENST00000511859 TMEM132BQ14DG7 1078 aa14.07□□□□□ -0.16
RNF4-216ENST00000511859 RIOX2Q8IUF8 465 aa14.07□□□□□ -0.16
RNF4-216ENST00000511859 PCSK9Q8NBP7 692 aaKnown RBP14.07□□□□□ -0.16
RNF4-216ENST00000511859 ATG4CQ96DT6 458 aa14.07□□□□□ -0.16
RNF4-216ENST00000511859 NECAB3Q96P71 396 aaPredicted RBP14.07□□□□□ -0.16
RNF4-216ENST00000511859 DBNDD2Q9BQY9 259 aa14.07□□□□□ -0.16
RNF4-216ENST00000511859 IL23AQ9NPF7 189 aa14.07□□□□□ -0.16
RNF4-216ENST00000511859 ADAMTS5Q9UNA0 930 aa14.07□□□□□ -0.16
RNF4-216ENST00000511859 SYNRGQ9UMZ2 1314 aa14.06□□□□□ -0.16
RNF4-216ENST00000511859 COL11A1P12107 1806 aaPredicted RBP14.06□□□□□ -0.16
RNF4-216ENST00000511859 ARVCFO00192 962 aa14.06□□□□□ -0.16
RNF4-216ENST00000511859 ERC2O15083 957 aa14.06□□□□□ -0.16
RNF4-216ENST00000511859 TLR3O15455 904 aaKnown RBP14.06□□□□□ -0.16
RNF4-216ENST00000511859 DUSP11O75319 330 aaKnown RBP14.06□□□□□ -0.16
RNF4-216ENST00000511859 FGBP02675 491 aa14.06□□□□□ -0.16
RNF4-216ENST00000511859 CST5P28325 142 aaPredicted RBP14.06□□□□□ -0.16
RNF4-216ENST00000511859 TMEM179Q6ZVK1 233 aa14.06□□□□□ -0.16
RNF4-216ENST00000511859 MAGEB6Q8N7X4 407 aa14.06□□□□□ -0.16
RNF4-216ENST00000511859 ARHGAP45Q92619 1136 aa14.06□□□□□ -0.16
RNF4-216ENST00000511859 VTI1AQ96AJ9 217 aa14.06□□□□□ -0.16
RNF4-216ENST00000511859 CDCA7LQ96GN5 454 aa14.06□□□□□ -0.16
RNF4-216ENST00000511859 NKX2-4Q9H2Z4 354 aa14.06□□□□□ -0.16
RNF4-216ENST00000511859 SH2D4AQ9H788 454 aa14.06□□□□□ -0.16
RNF4-216ENST00000511859 SPC25Q9HBM1 224 aa14.06□□□□□ -0.16
RNF4-216ENST00000511859 ARHGEF10LQ9HCE6 1279 aa14.06□□□□□ -0.16
RNF4-216ENST00000511859 TMX2Q9Y320 296 aa14.06□□□□□ -0.16
RNF4-216ENST00000511859 PARP14Q460N5 1801 aa14.05□□□□□ -0.16
RNF4-216ENST00000511859 PNMA6EA0A0J9YXQ4 647 aa14.05□□□□□ -0.16
RNF4-216ENST00000511859 A0A0U1RQG5 324 aaPredicted RBP14.05□□□□□ -0.16
RNF4-216ENST00000511859 APBB1O00213 710 aa14.05□□□□□ -0.16
RNF4-216ENST00000511859 WDR46O15213 610 aaKnown RBP14.05□□□□□ -0.16
RNF4-216ENST00000511859 STAT3P40763 770 aa14.05□□□□□ -0.16
RNF4-216ENST00000511859 MAPK8IP2Q13387 824 aaPredicted RBP14.05□□□□□ -0.16
RNF4-216ENST00000511859 TMEM31Q5JXX7 168 aa14.05□□□□□ -0.16
RNF4-216ENST00000511859 KIAA1755Q5JYT7 1200 aa14.05□□□□□ -0.16
RNF4-216ENST00000511859 EPHX3Q9H6B9 360 aa14.05□□□□□ -0.16
RNF4-216ENST00000511859 ASGR1P07306 291 aa14.04□□□□□ -0.16
RNF4-216ENST00000511859 POU3F3P20264 500 aaPredicted RBP14.04□□□□□ -0.16
RNF4-216ENST00000511859 TFF2Q03403 129 aa14.04□□□□□ -0.16
RNF4-216ENST00000511859 MAMDC4Q6UXC1 1216 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms