RNA–Protein interactions for RNA: ENST00000511669.1

CXCL3-204, Transcript of C-X-C motif chemokine ligand 3, humanhuman

TSL 1 (best)

Gene CXCL3, Length 1,641 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-204ENST00000511669 COL2A1P02458 1487 aaPredicted RBP18.84■□□□□ 0.61
CXCL3-204ENST00000511669 TGFB2P61812 414 aa18.84■□□□□ 0.61
CXCL3-204ENST00000511669 HEATR3Q7Z4Q2 680 aa18.84■□□□□ 0.61
CXCL3-204ENST00000511669 CNNM3Q8NE01 707 aa18.84■□□□□ 0.61
CXCL3-204ENST00000511669 PIBF1Q8WXW3 757 aa18.84■□□□□ 0.61
CXCL3-204ENST00000511669 TNFRSF25Q93038 417 aa18.84■□□□□ 0.61
CXCL3-204ENST00000511669 C6orf50Q9HD87 102 aa18.84■□□□□ 0.61
CXCL3-204ENST00000511669 ADAMTSL1Q8N6G6 1762 aa18.84■□□□□ 0.61
CXCL3-204ENST00000511669 IGKV6D-41A0A0C4DH26 115 aa18.83■□□□□ 0.61
CXCL3-204ENST00000511669 MPHOSPH10O00566 681 aaKnown RBP18.83■□□□□ 0.61
CXCL3-204ENST00000511669 AKR1B1P15121 316 aa18.83■□□□□ 0.61
CXCL3-204ENST00000511669 GPATCH4Q5T3I0 446 aaKnown RBP18.83■□□□□ 0.61
CXCL3-204ENST00000511669 LARGE2Q8N3Y3 721 aa18.83■□□□□ 0.61
CXCL3-204ENST00000511669 SHMT1P34896 483 aa18.82■□□□□ 0.6
CXCL3-204ENST00000511669 PIK3AP1Q6ZUJ8 805 aa18.82■□□□□ 0.6
CXCL3-204ENST00000511669 LUZP1Q86V48 1076 aa18.82■□□□□ 0.6
CXCL3-204ENST00000511669 OGFOD1Q8N543 542 aa18.82■□□□□ 0.6
CXCL3-204ENST00000511669 CLIC6Q96NY7 704 aa18.82■□□□□ 0.6
CXCL3-204ENST00000511669 BPIFA3Q9BQP9 254 aa18.82■□□□□ 0.6
CXCL3-204ENST00000511669 SMTNL1A8MU46 457 aa18.82■□□□□ 0.6
CXCL3-204ENST00000511669 NAPAP54920 295 aa18.82■□□□□ 0.6
CXCL3-204ENST00000511669 NLRP12P59046 1061 aa18.82■□□□□ 0.6
CXCL3-204ENST00000511669 NPY5RQ15761 445 aa18.82■□□□□ 0.6
CXCL3-204ENST00000511669 RSBN1LQ6PCB5 846 aaPredicted RBP18.82■□□□□ 0.6
CXCL3-204ENST00000511669 KRBA2Q6ZNG9 492 aa18.82■□□□□ 0.6
CXCL3-204ENST00000511669 KRT25Q7Z3Z0 450 aa18.82■□□□□ 0.6
CXCL3-204ENST00000511669 KCNQ5Q9NR82 932 aa18.82■□□□□ 0.6
CXCL3-204ENST00000511669 CLIP2Q9UDT6 1046 aa18.82■□□□□ 0.6
CXCL3-204ENST00000511669 STXBP3O00186 592 aa18.81■□□□□ 0.6
CXCL3-204ENST00000511669 PDHBP11177 359 aa18.81■□□□□ 0.6
CXCL3-204ENST00000511669 DPEP1P16444 411 aa18.81■□□□□ 0.6
CXCL3-204ENST00000511669 MMP14P50281 582 aa18.81■□□□□ 0.6
CXCL3-204ENST00000511669 CFAP100Q494V2 611 aa18.81■□□□□ 0.6
CXCL3-204ENST00000511669 CERKLQ49MI3 558 aaPredicted RBP18.81■□□□□ 0.6
CXCL3-204ENST00000511669 ARL6IP4Q66PJ3 421 aaKnown RBP18.81■□□□□ 0.6
CXCL3-204ENST00000511669 WWC2Q6AWC2 1192 aa18.81■□□□□ 0.6
CXCL3-204ENST00000511669 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.81■□□□□ 0.6
CXCL3-204ENST00000511669 NIM1KQ8IY84 436 aa18.81■□□□□ 0.6
CXCL3-204ENST00000511669 KANSL2Q9H9L4 492 aa18.81■□□□□ 0.6
CXCL3-204ENST00000511669 PIM2Q9P1W9 311 aa18.81■□□□□ 0.6
CXCL3-204ENST00000511669 GREB1LQ9C091 1923 aaPredicted RBP18.8■□□□□ 0.6
CXCL3-204ENST00000511669 ESYT2A0FGR8 921 aa18.8■□□□□ 0.6
CXCL3-204ENST00000511669 LAD1O00515 517 aa18.8■□□□□ 0.6
CXCL3-204ENST00000511669 TXLNAP40222 546 aa18.8■□□□□ 0.6
CXCL3-204ENST00000511669 ATP2C1P98194 919 aaPredicted RBP18.8■□□□□ 0.6
CXCL3-204ENST00000511669 NFIAQ12857 509 aa18.8■□□□□ 0.6
CXCL3-204ENST00000511669 PPP1R18Q6NYC8 613 aa18.8■□□□□ 0.6
CXCL3-204ENST00000511669 USP17L2Q6R6M4 530 aa18.8■□□□□ 0.6
CXCL3-204ENST00000511669 GPKOWQ92917 476 aaPredicted RBP eCLIP18.8■□□□□ 0.6
CXCL3-204ENST00000511669 SHISA4Q96DD7 197 aa18.8■□□□□ 0.6
CXCL3-204ENST00000511669 ZMYND12Q9H0C1 365 aa18.8■□□□□ 0.6
CXCL3-204ENST00000511669 RIOX1Q9H6W3 641 aa18.8■□□□□ 0.6
CXCL3-204ENST00000511669 DACH1Q9UI36 760 aa18.8■□□□□ 0.6
CXCL3-204ENST00000511669 ATRNL1Q5VV63 1379 aa18.79■□□□□ 0.6
CXCL3-204ENST00000511669 MYH4Q9Y623 1939 aa18.79■□□□□ 0.6
CXCL3-204ENST00000511669 CYTH3O43739 400 aa18.79■□□□□ 0.6
CXCL3-204ENST00000511669 GOLGA8HP0CJ92 632 aa18.79■□□□□ 0.6
CXCL3-204ENST00000511669 SNHG28P0DPA3 235 aa18.79■□□□□ 0.6
CXCL3-204ENST00000511669 TCP10Q12799 353 aa18.79■□□□□ 0.6
CXCL3-204ENST00000511669 ORC2Q13416 577 aaPredicted RBP18.79■□□□□ 0.6
CXCL3-204ENST00000511669 TMEM179Q6ZVK1 233 aa18.79■□□□□ 0.6
CXCL3-204ENST00000511669 NYAP2Q9P242 653 aa18.79■□□□□ 0.6
CXCL3-204ENST00000511669 USP17L5A8MUK1 530 aa18.78■□□□□ 0.6
CXCL3-204ENST00000511669 DLGAP5Q15398 846 aa18.78■□□□□ 0.6
CXCL3-204ENST00000511669 ZNF174Q15697 407 aa18.78■□□□□ 0.6
CXCL3-204ENST00000511669 TRIM5Q9C035 493 aa18.78■□□□□ 0.6
CXCL3-204ENST00000511669 CSRNP2Q9H175 543 aa18.78■□□□□ 0.6
CXCL3-204ENST00000511669 FAM198AQ9UFP1 575 aa18.78■□□□□ 0.6
CXCL3-204ENST00000511669 HERC5Q9UII4 1024 aaKnown RBP18.78■□□□□ 0.6
CXCL3-204ENST00000511669 TUBE1Q9UJT0 475 aa18.78■□□□□ 0.6
CXCL3-204ENST00000511669 SMC2O95347 1197 aa18.78■□□□□ 0.6
CXCL3-204ENST00000511669 VIL1P09327 827 aaKnown RBP18.78■□□□□ 0.6
CXCL3-204ENST00000511669 CLCN1P35523 988 aa18.78■□□□□ 0.6
CXCL3-204ENST00000511669 PTGDRQ13258 359 aa18.78■□□□□ 0.6
CXCL3-204ENST00000511669 IQCB1Q15051 598 aa18.78■□□□□ 0.6
CXCL3-204ENST00000511669 SARM1Q6SZW1 724 aa18.78■□□□□ 0.6
CXCL3-204ENST00000511669 C11orf57Q6ZUT1 292 aaPredicted RBP18.78■□□□□ 0.6
CXCL3-204ENST00000511669 HOMER1Q86YM7 354 aa18.78■□□□□ 0.6
CXCL3-204ENST00000511669 LRRC47Q8N1G4 583 aaKnown RBP18.78■□□□□ 0.6
CXCL3-204ENST00000511669 AGBL3Q8NEM8 1001 aa18.78■□□□□ 0.6
CXCL3-204ENST00000511669 DCAF4Q8WV16 495 aa18.78■□□□□ 0.6
CXCL3-204ENST00000511669 GLT8D2Q9H1C3 349 aa18.78■□□□□ 0.6
CXCL3-204ENST00000511669 ZNRF3Q9ULT6 936 aa18.78■□□□□ 0.6
CXCL3-204ENST00000511669 YDJCA8MPS7 323 aa18.77■□□□□ 0.6
CXCL3-204ENST00000511669 POLR2DO15514 142 aaKnown RBP18.77■□□□□ 0.6
CXCL3-204ENST00000511669 LONP1P36776 959 aaKnown RBP18.77■□□□□ 0.6
CXCL3-204ENST00000511669 ATP2B2Q01814 1243 aa18.77■□□□□ 0.6
CXCL3-204ENST00000511669 ZNF543Q08ER8 600 aa18.77■□□□□ 0.6
CXCL3-204ENST00000511669 NONOQ15233 471 aaKnown RBP eCLIP18.77■□□□□ 0.6
CXCL3-204ENST00000511669 CCDC96Q2M329 555 aa18.77■□□□□ 0.6
CXCL3-204ENST00000511669 EARS2Q5JPH6 523 aaKnown RBP18.77■□□□□ 0.6
CXCL3-204ENST00000511669 TATDN1Q6P1N9 297 aa18.77■□□□□ 0.6
CXCL3-204ENST00000511669 TRIML1Q8N9V2 468 aa18.77■□□□□ 0.6
CXCL3-204ENST00000511669 TDRD3Q9H7E2 651 aaKnown RBP18.77■□□□□ 0.6
CXCL3-204ENST00000511669 SYNPO2Q9UMS6 1093 aa18.77■□□□□ 0.6
CXCL3-204ENST00000511669 ZKSCAN5Q9Y2L8 839 aa18.77■□□□□ 0.6
CXCL3-204ENST00000511669 BAZ2BQ9UIF8 2168 aaKnown RBP18.77■□□□□ 0.59
CXCL3-204ENST00000511669 FAM205CA6NFA0 338 aa18.76■□□□□ 0.59
CXCL3-204ENST00000511669 SMCO2A6NFE2 343 aa18.76■□□□□ 0.59
CXCL3-204ENST00000511669 MYO1BO43795 1136 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms