RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 PARP1P09874 1014 aaKnown RBP8.15□□□□□ -1.1
CPNE4-208ENST00000511604 DESP17661 470 aa8.15□□□□□ -1.1
CPNE4-208ENST00000511604 IDI1Q13907 227 aa8.15□□□□□ -1.1
CPNE4-208ENST00000511604 POLA2Q14181 598 aa8.15□□□□□ -1.1
CPNE4-208ENST00000511604 ALS2CLQ60I27 953 aa8.15□□□□□ -1.1
CPNE4-208ENST00000511604 RASGRP2Q7LDG7 609 aa8.15□□□□□ -1.1
CPNE4-208ENST00000511604 SDR16C5Q8N3Y7 309 aa8.15□□□□□ -1.1
CPNE4-208ENST00000511604 NSUN7Q8NE18 718 aaKnown RBP8.15□□□□□ -1.1
CPNE4-208ENST00000511604 HVCN1Q96D96 273 aa8.15□□□□□ -1.1
CPNE4-208ENST00000511604 PREBQ9HCU5 417 aa8.15□□□□□ -1.1
CPNE4-208ENST00000511604 INCENPQ9NQS7 918 aa8.15□□□□□ -1.1
CPNE4-208ENST00000511604 TSPYL4Q9UJ04 414 aa8.15□□□□□ -1.1
CPNE4-208ENST00000511604 MROH7-TTC4A0A0A0MT08 1334 aa8.15□□□□□ -1.11
CPNE4-208ENST00000511604 CDC42BPGQ6DT37 1551 aa8.15□□□□□ -1.11
CPNE4-208ENST00000511604 EIF4E1BA6NMX2 242 aaKnown RBP8.14□□□□□ -1.11
CPNE4-208ENST00000511604 ABLIM1O14639 778 aa8.14□□□□□ -1.11
CPNE4-208ENST00000511604 MBD4O95243 580 aa8.14□□□□□ -1.11
CPNE4-208ENST00000511604 CLTAP09496 248 aa8.14□□□□□ -1.11
CPNE4-208ENST00000511604 GHRP10912 638 aa8.14□□□□□ -1.11
CPNE4-208ENST00000511604 MARCKSP29966 332 aaPredicted RBP8.14□□□□□ -1.11
CPNE4-208ENST00000511604 KIF5BP33176 963 aa8.14□□□□□ -1.11
CPNE4-208ENST00000511604 ZMYM1Q5SVZ6 1142 aa8.14□□□□□ -1.11
CPNE4-208ENST00000511604 NBPF14Q5TI25 921 aa8.14□□□□□ -1.11
CPNE4-208ENST00000511604 ATL3Q6DD88 541 aa8.14□□□□□ -1.11
CPNE4-208ENST00000511604 STOX1Q6ZVD7 989 aa8.14□□□□□ -1.11
CPNE4-208ENST00000511604 UBE3BQ7Z3V4 1068 aa8.14□□□□□ -1.11
CPNE4-208ENST00000511604 HDGFL2Q7Z4V5 671 aaPredicted RBP8.14□□□□□ -1.11
CPNE4-208ENST00000511604 PNMA8AQ86V59 439 aaPredicted RBP8.14□□□□□ -1.11
CPNE4-208ENST00000511604 RAB11FIP4Q86YS3 637 aa8.14□□□□□ -1.11
CPNE4-208ENST00000511604 ELOA2Q8IYF1 753 aaPredicted RBP8.14□□□□□ -1.11
CPNE4-208ENST00000511604 TRMT44Q8IYL2 757 aaKnown RBP8.14□□□□□ -1.11
CPNE4-208ENST00000511604 SLC35B4Q969S0 331 aa8.14□□□□□ -1.11
CPNE4-208ENST00000511604 MED15Q96RN5 788 aa8.14□□□□□ -1.11
CPNE4-208ENST00000511604 MMS19Q96T76 1030 aa8.14□□□□□ -1.11
CPNE4-208ENST00000511604 CCDC8Q9H0W5 538 aaPredicted RBP8.14□□□□□ -1.11
CPNE4-208ENST00000511604 NDST4Q9H3R1 872 aa8.14□□□□□ -1.11
CPNE4-208ENST00000511604 TRIM10Q9UDY6 481 aa8.14□□□□□ -1.11
CPNE4-208ENST00000511604 TMEM98Q9Y2Y6 226 aa8.14□□□□□ -1.11
CPNE4-208ENST00000511604 UBN2Q6ZU65 1347 aa8.14□□□□□ -1.11
CPNE4-208ENST00000511604 KDM6AO15550 1401 aaPredicted RBP8.14□□□□□ -1.11
CPNE4-208ENST00000511604 CRB1P82279 1406 aa8.14□□□□□ -1.11
CPNE4-208ENST00000511604 PTPDC1A2A3K4 754 aa8.14□□□□□ -1.11
CPNE4-208ENST00000511604 TEX33O43247 280 aa8.14□□□□□ -1.11
CPNE4-208ENST00000511604 PPIP5K2O43314 1243 aa8.14□□□□□ -1.11
CPNE4-208ENST00000511604 HSF2BPO75031 334 aa8.14□□□□□ -1.11
CPNE4-208ENST00000511604 SRGAP2O75044 1071 aa8.14□□□□□ -1.11
CPNE4-208ENST00000511604 NR1D1P20393 614 aa8.14□□□□□ -1.11
CPNE4-208ENST00000511604 APBA1Q02410 837 aa8.14□□□□□ -1.11
CPNE4-208ENST00000511604 PRPF4BQ13523 1007 aaKnown RBP8.14□□□□□ -1.11
CPNE4-208ENST00000511604 INF2Q27J81 1249 aa8.14□□□□□ -1.11
CPNE4-208ENST00000511604 ANKRD20A2Q5SQ80 823 aa8.14□□□□□ -1.11
CPNE4-208ENST00000511604 ANKRD20A1Q5TYW2 823 aa8.14□□□□□ -1.11
CPNE4-208ENST00000511604 EFCAB2Q5VUJ9 269 aa8.14□□□□□ -1.11
CPNE4-208ENST00000511604 ANKRD20A3Q5VUR7 823 aa8.14□□□□□ -1.11
CPNE4-208ENST00000511604 TRAPPC11Q7Z392 1133 aa8.14□□□□□ -1.11
CPNE4-208ENST00000511604 MAATS1Q7Z4T9 603 aa8.14□□□□□ -1.11
CPNE4-208ENST00000511604 CNBD1Q8NA66 436 aa8.14□□□□□ -1.11
CPNE4-208ENST00000511604 CCT6BQ92526 530 aa8.14□□□□□ -1.11
CPNE4-208ENST00000511604 OPTNQ96CV9 577 aa8.14□□□□□ -1.11
CPNE4-208ENST00000511604 RPGRIP1Q96KN7 1286 aa8.14□□□□□ -1.11
CPNE4-208ENST00000511604 PANX2Q96RD6 677 aa8.14□□□□□ -1.11
CPNE4-208ENST00000511604 BOLA2Q9H3K6 86 aa8.14□□□□□ -1.11
CPNE4-208ENST00000511604 OCEL1Q9H607 264 aa8.14□□□□□ -1.11
CPNE4-208ENST00000511604 GPHNQ9NQX3 736 aaPredicted RBP8.14□□□□□ -1.11
CPNE4-208ENST00000511604 TTF2Q9UNY4 1162 aaKnown RBP8.14□□□□□ -1.11
CPNE4-208ENST00000511604 LEMD3Q9Y2U8 911 aa8.14□□□□□ -1.11
CPNE4-208ENST00000511604 SETBP1Q9Y6X0 1596 aa8.14□□□□□ -1.11
CPNE4-208ENST00000511604 IFT172Q9UG01 1749 aa8.14□□□□□ -1.11
CPNE4-208ENST00000511604 ENC1O14682 589 aa8.13□□□□□ -1.11
CPNE4-208ENST00000511604 KRT14P02533 472 aa8.13□□□□□ -1.11
CPNE4-208ENST00000511604 ANXA1P04083 346 aa8.13□□□□□ -1.11
CPNE4-208ENST00000511604 VIMP08670 466 aaKnown RBP8.13□□□□□ -1.11
CPNE4-208ENST00000511604 ALADP13716 330 aa8.13□□□□□ -1.11
CPNE4-208ENST00000511604 POLE2P56282 527 aa8.13□□□□□ -1.11
CPNE4-208ENST00000511604 FMR1Q06787 632 aaKnown RBP eCLIP8.13□□□□□ -1.11
CPNE4-208ENST00000511604 EIF4A2Q14240 407 aaKnown RBP8.13□□□□□ -1.11
CPNE4-208ENST00000511604 ANKRD1Q15327 319 aa8.13□□□□□ -1.11
CPNE4-208ENST00000511604 ZNF827Q17R98 1081 aa8.13□□□□□ -1.11
CPNE4-208ENST00000511604 WAPLQ7Z5K2 1190 aa8.13□□□□□ -1.11
CPNE4-208ENST00000511604 LCA5Q86VQ0 697 aa8.13□□□□□ -1.11
CPNE4-208ENST00000511604 KCNN1Q92952 543 aa8.13□□□□□ -1.11
CPNE4-208ENST00000511604 C8orf76Q96K31 380 aa8.13□□□□□ -1.11
CPNE4-208ENST00000511604 NAA15Q9BXJ9 866 aaKnown RBP8.13□□□□□ -1.11
CPNE4-208ENST00000511604 PPANQ9NQ55 473 aaKnown RBP8.13□□□□□ -1.11
CPNE4-208ENST00000511604 PANK4Q9NVE7 773 aa8.13□□□□□ -1.11
CPNE4-208ENST00000511604 ATXN10Q9UBB4 475 aa8.13□□□□□ -1.11
CPNE4-208ENST00000511604 BZW2Q9Y6E2 419 aaKnown RBP8.13□□□□□ -1.11
CPNE4-208ENST00000511604 MED1Q15648 1581 aaPredicted RBP8.13□□□□□ -1.11
CPNE4-208ENST00000511604 MYH15Q9Y2K3 1946 aa8.13□□□□□ -1.11
CPNE4-208ENST00000511604 KIF28PB7ZC32 967 aa8.13□□□□□ -1.11
CPNE4-208ENST00000511604 AKR1B15C9JRZ8 316 aaPredicted RBP8.13□□□□□ -1.11
CPNE4-208ENST00000511604 EVI5O60447 810 aa8.13□□□□□ -1.11
CPNE4-208ENST00000511604 VIL1P09327 827 aaKnown RBP8.13□□□□□ -1.11
CPNE4-208ENST00000511604 FDPSP14324 419 aaKnown RBP8.13□□□□□ -1.11
CPNE4-208ENST00000511604 PFKFB1P16118 471 aa8.13□□□□□ -1.11
CPNE4-208ENST00000511604 TUBP50607 506 aa8.13□□□□□ -1.11
CPNE4-208ENST00000511604 MRPS35P82673 323 aaKnown RBP8.13□□□□□ -1.11
CPNE4-208ENST00000511604 MAP3K12Q12852 859 aa8.13□□□□□ -1.11
CPNE4-208ENST00000511604 ADAM9Q13443 819 aa8.13□□□□□ -1.11
CPNE4-208ENST00000511604 TMED1Q13445 227 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms