RNA–Protein interactions for RNA: ENST00000511303.5

SGCA-207, Transcript of sarcoglycan alpha, humanhuman

TSL 3

Gene SGCA, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-207ENST00000511303 KIAA1683Q9H0B3 1180 aa13.77□□□□□ -0.21
SGCA-207ENST00000511303 FOXP1Q9H334 677 aaPredicted RBP13.77□□□□□ -0.21
SGCA-207ENST00000511303 VCPKMTQ9H867 229 aa13.77□□□□□ -0.21
SGCA-207ENST00000511303 AS3MTQ9HBK9 375 aa13.77□□□□□ -0.21
SGCA-207ENST00000511303 PICK1Q9NRD5 415 aa13.77□□□□□ -0.21
SGCA-207ENST00000511303 SEC63Q9UGP8 760 aaKnown RBP13.77□□□□□ -0.21
SGCA-207ENST00000511303 CFAP45Q9UL16 551 aa13.77□□□□□ -0.21
SGCA-207ENST00000511303 A0A1W2PRG0 241 aa13.76□□□□□ -0.21
SGCA-207ENST00000511303 CYTH3O43739 400 aa13.76□□□□□ -0.21
SGCA-207ENST00000511303 USP2O75604 605 aaPredicted RBP13.76□□□□□ -0.21
SGCA-207ENST00000511303 NDUFB10O96000 172 aa13.76□□□□□ -0.21
SGCA-207ENST00000511303 MMP1P03956 469 aa13.76□□□□□ -0.21
SGCA-207ENST00000511303 BMP3P12645 472 aa13.76□□□□□ -0.21
SGCA-207ENST00000511303 USP14P54578 494 aa13.76□□□□□ -0.21
SGCA-207ENST00000511303 MAP3K9P80192 1104 aa13.76□□□□□ -0.21
SGCA-207ENST00000511303 CLEC10AQ8IUN9 316 aa13.76□□□□□ -0.21
SGCA-207ENST00000511303 CCDC148Q8NFR7 591 aa13.76□□□□□ -0.21
SGCA-207ENST00000511303 CHURC1Q8WUH1 139 aa13.76□□□□□ -0.21
SGCA-207ENST00000511303 MTMR8Q96EF0 704 aa13.76□□□□□ -0.21
SGCA-207ENST00000511303 ZNF396Q96N95 335 aaPredicted RBP13.76□□□□□ -0.21
SGCA-207ENST00000511303 SCAND2PQ9GZW5 306 aaPredicted RBP13.76□□□□□ -0.21
SGCA-207ENST00000511303 BRMS1Q9HCU9 246 aa13.76□□□□□ -0.21
SGCA-207ENST00000511303 PNMA6FA0A0J9YX94 578 aa13.75□□□□□ -0.21
SGCA-207ENST00000511303 C19orf81C9J6K1 198 aa13.75□□□□□ -0.21
SGCA-207ENST00000511303 GOLGA8HP0CJ92 632 aa13.75□□□□□ -0.21
SGCA-207ENST00000511303 IREB2P48200 963 aaKnown RBP13.75□□□□□ -0.21
SGCA-207ENST00000511303 KRT85P78386 507 aa13.75□□□□□ -0.21
SGCA-207ENST00000511303 KIF23Q02241 960 aaPredicted RBP13.75□□□□□ -0.21
SGCA-207ENST00000511303 MAP3K11Q16584 847 aa13.75□□□□□ -0.21
SGCA-207ENST00000511303 CCDC96Q2M329 555 aa13.75□□□□□ -0.21
SGCA-207ENST00000511303 SHROOM1Q2M3G4 852 aaPredicted RBP13.75□□□□□ -0.21
SGCA-207ENST00000511303 SKOR2Q2VWA4 1001 aaPredicted RBP13.75□□□□□ -0.21
SGCA-207ENST00000511303 FOXD4L5Q5VV16 416 aaPredicted RBP13.75□□□□□ -0.21
SGCA-207ENST00000511303 MCTP1Q6DN14 999 aa13.75□□□□□ -0.21
SGCA-207ENST00000511303 FAM160B2Q86V87 743 aa13.75□□□□□ -0.21
SGCA-207ENST00000511303 TMEM87AQ8NBN3 555 aa13.75□□□□□ -0.21
SGCA-207ENST00000511303 FOXD4L4Q8WXT5 416 aaPredicted RBP13.75□□□□□ -0.21
SGCA-207ENST00000511303 WRNIP1Q96S55 665 aa13.75□□□□□ -0.21
SGCA-207ENST00000511303 PHF20Q9BVI0 1012 aa13.75□□□□□ -0.21
SGCA-207ENST00000511303 BARHL2Q9NY43 387 aa13.75□□□□□ -0.21
SGCA-207ENST00000511303 SCN4AP35499 1836 aa13.74□□□□□ -0.21
SGCA-207ENST00000511303 WDR90Q96KV7 1748 aa13.74□□□□□ -0.21
SGCA-207ENST00000511303 USP17L10C9JJH3 530 aa13.74□□□□□ -0.21
SGCA-207ENST00000511303 DTNBO60941 627 aa13.74□□□□□ -0.21
SGCA-207ENST00000511303 PPFIA3O75145 1194 aa13.74□□□□□ -0.21
SGCA-207ENST00000511303 PTPRAP18433 802 aa13.74□□□□□ -0.21
SGCA-207ENST00000511303 INPP5BP32019 993 aa13.74□□□□□ -0.21
SGCA-207ENST00000511303 SLC35G1Q2M3R5 365 aa13.74□□□□□ -0.21
SGCA-207ENST00000511303 FERMT3Q86UX7 667 aa13.74□□□□□ -0.21
SGCA-207ENST00000511303 ADGRF4Q8IZF3 695 aa13.74□□□□□ -0.21
SGCA-207ENST00000511303 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.74□□□□□ -0.21
SGCA-207ENST00000511303 RBM46Q8TBY0 533 aaKnown RBP13.74□□□□□ -0.21
SGCA-207ENST00000511303 ACER1Q8TDN7 264 aa13.74□□□□□ -0.21
SGCA-207ENST00000511303 AIFM3Q96NN9 605 aa13.74□□□□□ -0.21
SGCA-207ENST00000511303 GLT8D2Q9H1C3 349 aa13.74□□□□□ -0.21
SGCA-207ENST00000511303 JMJD4Q9H9V9 463 aa13.74□□□□□ -0.21
SGCA-207ENST00000511303 GPCPD1Q9NPB8 672 aa13.74□□□□□ -0.21
SGCA-207ENST00000511303 FEM1BQ9UK73 627 aa13.74□□□□□ -0.21
SGCA-207ENST00000511303 SCAF8Q9UPN6 1271 aaKnown RBP13.74□□□□□ -0.21
SGCA-207ENST00000511303 MTMR7Q9Y216 660 aa13.74□□□□□ -0.21
SGCA-207ENST00000511303 ESYT2A0FGR8 921 aa13.73□□□□□ -0.21
SGCA-207ENST00000511303 ZBTB5O15062 677 aa13.73□□□□□ -0.21
SGCA-207ENST00000511303 WDR46O15213 610 aaKnown RBP13.73□□□□□ -0.21
SGCA-207ENST00000511303 FDX1P10109 184 aa13.73□□□□□ -0.21
SGCA-207ENST00000511303 GNA11P29992 359 aa13.73□□□□□ -0.21
SGCA-207ENST00000511303 GUCY1B3Q02153 619 aa13.73□□□□□ -0.21
SGCA-207ENST00000511303 GNL2Q13823 731 aaKnown RBP13.73□□□□□ -0.21
SGCA-207ENST00000511303 EAPPQ56P03 285 aaPredicted RBP13.73□□□□□ -0.21
SGCA-207ENST00000511303 PRAMEF18Q5VWM3 479 aa13.73□□□□□ -0.21
SGCA-207ENST00000511303 OTUD7BQ6GQQ9 843 aa13.73□□□□□ -0.21
SGCA-207ENST00000511303 PPP1R18Q6NYC8 613 aa13.73□□□□□ -0.21
SGCA-207ENST00000511303 KCTD1Q719H9 257 aa13.73□□□□□ -0.21
SGCA-207ENST00000511303 DAGLBQ8NCG7 672 aa13.73□□□□□ -0.21
SGCA-207ENST00000511303 ZNF280CQ8ND82 737 aa13.73□□□□□ -0.21
SGCA-207ENST00000511303 BICD2Q8TD16 824 aa13.73□□□□□ -0.21
SGCA-207ENST00000511303 UBA5Q9GZZ9 404 aa13.73□□□□□ -0.21
SGCA-207ENST00000511303 PNMA2Q9UL42 364 aa13.73□□□□□ -0.21
SGCA-207ENST00000511303 MYH8P13535 1937 aa13.72□□□□□ -0.21
SGCA-207ENST00000511303 ELP1O95163 1332 aa13.72□□□□□ -0.21
SGCA-207ENST00000511303 FRMPD2Q68DX3 1309 aaPredicted RBP13.72□□□□□ -0.21
SGCA-207ENST00000511303 ADM5C9JUS6 153 aa13.72□□□□□ -0.21
SGCA-207ENST00000511303 KRT2P35908 639 aa13.72□□□□□ -0.21
SGCA-207ENST00000511303 ECE1P42892 770 aa13.72□□□□□ -0.21
SGCA-207ENST00000511303 STAT2P52630 851 aa13.72□□□□□ -0.21
SGCA-207ENST00000511303 BACE1P56817 501 aa13.72□□□□□ -0.21
SGCA-207ENST00000511303 NLRP5P59047 1200 aa13.72□□□□□ -0.21
SGCA-207ENST00000511303 FKBP1BP68106 108 aa13.72□□□□□ -0.21
SGCA-207ENST00000511303 DNM1Q05193 864 aaKnown RBP13.72□□□□□ -0.21
SGCA-207ENST00000511303 SYDE2Q5VT97 1194 aa13.72□□□□□ -0.21
SGCA-207ENST00000511303 MCTP2Q6DN12 878 aa13.72□□□□□ -0.21
SGCA-207ENST00000511303 ARMC9Q7Z3E5 817 aa13.72□□□□□ -0.21
SGCA-207ENST00000511303 LDHDQ86WU2 507 aa13.72□□□□□ -0.21
SGCA-207ENST00000511303 NOSTRINQ8IVI9 506 aa13.72□□□□□ -0.21
SGCA-207ENST00000511303 DIS3L2Q8IYB7 885 aaKnown RBP13.72□□□□□ -0.21
SGCA-207ENST00000511303 ANKRD13AQ8IZ07 590 aa13.72□□□□□ -0.21
SGCA-207ENST00000511303 CDCA5Q96FF9 252 aa13.72□□□□□ -0.21
SGCA-207ENST00000511303 C12orf42Q96LP6 360 aa13.72□□□□□ -0.21
SGCA-207ENST00000511303 PIGSQ96S52 555 aa13.72□□□□□ -0.21
SGCA-207ENST00000511303 FEZ1Q99689 392 aa13.72□□□□□ -0.21
SGCA-207ENST00000511303 ANP32EQ9BTT0 268 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms