RNA–Protein interactions for RNA: ENST00000510331.1

LSM6-206, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-206ENST00000510331 NEDD1Q8NHV4 660 aa22.06■■□□□ 1.12
LSM6-206ENST00000510331 SPATC1LQ9H0A9 340 aa22.06■■□□□ 1.12
LSM6-206ENST00000510331 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.06■■□□□ 1.12
LSM6-206ENST00000510331 PAK6Q9NQU5 681 aaPredicted RBP22.06■■□□□ 1.12
LSM6-206ENST00000510331 MTMR4Q9NYA4 1195 aa22.06■■□□□ 1.12
LSM6-206ENST00000510331 CLIP2Q9UDT6 1046 aa22.06■■□□□ 1.12
LSM6-206ENST00000510331 ZMYM6O95789 1325 aa22.06■■□□□ 1.12
LSM6-206ENST00000510331 HSPD1P10809 573 aaKnown RBP22.05■■□□□ 1.12
LSM6-206ENST00000510331 XRCC5P13010 732 aaKnown RBP22.05■■□□□ 1.12
LSM6-206ENST00000510331 TFAP4Q01664 338 aa22.05■■□□□ 1.12
LSM6-206ENST00000510331 GRB14Q14449 540 aa22.05■■□□□ 1.12
LSM6-206ENST00000510331 PLS1Q14651 629 aa22.05■■□□□ 1.12
LSM6-206ENST00000510331 MB21D1Q8N884 522 aa22.05■■□□□ 1.12
LSM6-206ENST00000510331 NKX2-3Q8TAU0 364 aa22.05■■□□□ 1.12
LSM6-206ENST00000510331 DEFB118Q96PH6 123 aa22.05■■□□□ 1.12
LSM6-206ENST00000510331 ANAPC4Q9UJX5 808 aa22.05■■□□□ 1.12
LSM6-206ENST00000510331 PPP1R9AQ9ULJ8 1098 aa22.05■■□□□ 1.12
LSM6-206ENST00000510331 PRKAR2AP13861 404 aaKnown RBP22.04■■□□□ 1.12
LSM6-206ENST00000510331 GSPT1P15170 499 aaKnown RBP22.04■■□□□ 1.12
LSM6-206ENST00000510331 ERCC3P19447 782 aa22.04■■□□□ 1.12
LSM6-206ENST00000510331 PTPREP23469 700 aa22.04■■□□□ 1.12
LSM6-206ENST00000510331 MAP2K5Q13163 448 aa22.04■■□□□ 1.12
LSM6-206ENST00000510331 ALX1Q15699 326 aa22.04■■□□□ 1.12
LSM6-206ENST00000510331 DIAPH3Q9NSV4 1193 aa22.04■■□□□ 1.12
LSM6-206ENST00000510331 IVNS1ABPQ9Y6Y0 642 aa22.04■■□□□ 1.12
LSM6-206ENST00000510331 SLC15A5A6NIM6 579 aa22.03■■□□□ 1.12
LSM6-206ENST00000510331 F5H6K3 240 aa22.03■■□□□ 1.12
LSM6-206ENST00000510331 NMT2O60551 498 aa22.03■■□□□ 1.12
LSM6-206ENST00000510331 TTLL1O95922 423 aa22.03■■□□□ 1.12
LSM6-206ENST00000510331 FGAP02671 866 aa22.03■■□□□ 1.12
LSM6-206ENST00000510331 KLRC3Q07444 240 aa22.03■■□□□ 1.12
LSM6-206ENST00000510331 TMEM132BQ14DG7 1078 aa22.03■■□□□ 1.12
LSM6-206ENST00000510331 CWC27Q6UX04 472 aaKnown RBP22.03■■□□□ 1.12
LSM6-206ENST00000510331 NBPF3Q9H094 633 aa22.03■■□□□ 1.12
LSM6-206ENST00000510331 CEP290O15078 2479 aa22.03■■□□□ 1.12
LSM6-206ENST00000510331 TSPY2A6NKD2 308 aa22.02■■□□□ 1.12
LSM6-206ENST00000510331 HAND2P61296 217 aa22.02■■□□□ 1.12
LSM6-206ENST00000510331 TTC22Q5TAA0 569 aa22.02■■□□□ 1.12
LSM6-206ENST00000510331 MAP3K21Q5TCX8 1036 aa22.02■■□□□ 1.12
LSM6-206ENST00000510331 PRPF38BQ5VTL8 546 aaKnown RBP22.02■■□□□ 1.12
LSM6-206ENST00000510331 SHCBP1Q8NEM2 672 aa22.02■■□□□ 1.12
LSM6-206ENST00000510331 SLF1Q9BQI6 1058 aa22.02■■□□□ 1.12
LSM6-206ENST00000510331 FLRT1Q9NZU1 646 aa22.02■■□□□ 1.12
LSM6-206ENST00000510331 ADAMTS5Q9UNA0 930 aa22.02■■□□□ 1.12
LSM6-206ENST00000510331 PLXNA1Q9UIW2 1896 aa22.01■■□□□ 1.11
LSM6-206ENST00000510331 VWA5AO00534 786 aa22.01■■□□□ 1.11
LSM6-206ENST00000510331 ORC4O43929 436 aa22.01■■□□□ 1.11
LSM6-206ENST00000510331 SGPL1O95470 568 aa22.01■■□□□ 1.11
LSM6-206ENST00000510331 RASGRP2Q7LDG7 609 aa22.01■■□□□ 1.11
LSM6-206ENST00000510331 UBE2Q1Q7Z7E8 422 aa22.01■■□□□ 1.11
LSM6-206ENST00000510331 NCAPG2Q86XI2 1143 aa22.01■■□□□ 1.11
LSM6-206ENST00000510331 TBC1D10CQ8IV04 446 aa22.01■■□□□ 1.11
LSM6-206ENST00000510331 GMCL1P1Q8NEA9 526 aa22.01■■□□□ 1.11
LSM6-206ENST00000510331 REPS2Q8NFH8 660 aa22.01■■□□□ 1.11
LSM6-206ENST00000510331 MKL1Q969V6 931 aa22.01■■□□□ 1.11
LSM6-206ENST00000510331 SYNPO2Q9UMS6 1093 aa22.01■■□□□ 1.11
LSM6-206ENST00000510331 RPTORQ8N122 1335 aa22.01■■□□□ 1.11
LSM6-206ENST00000510331 ALPK3Q96L96 1907 aa22■■□□□ 1.11
LSM6-206ENST00000510331 RANBP6O60518 1105 aaKnown RBP22■■□□□ 1.11
LSM6-206ENST00000510331 FARP2O94887 1054 aaPredicted RBP22■■□□□ 1.11
LSM6-206ENST00000510331 ADORA2AP29274 412 aa22■■□□□ 1.11
LSM6-206ENST00000510331 TRMT44Q8IYL2 757 aaKnown RBP22■■□□□ 1.11
LSM6-206ENST00000510331 NPLOC4Q8TAT6 608 aa22■■□□□ 1.11
LSM6-206ENST00000510331 IL25Q9H293 177 aa22■■□□□ 1.11
LSM6-206ENST00000510331 IL17RBQ9NRM6 502 aa22■■□□□ 1.11
LSM6-206ENST00000510331 TOMM22Q9NS69 142 aa22■■□□□ 1.11
LSM6-206ENST00000510331 ZNF214Q9UL59 606 aaPredicted RBP22■■□□□ 1.11
LSM6-206ENST00000510331 ZNFX1Q9P2E3 1918 aaKnown RBP22■■□□□ 1.11
LSM6-206ENST00000510331 MFAP1P55081 439 aaKnown RBP21.99■■□□□ 1.11
LSM6-206ENST00000510331 CACNB2Q08289 660 aaPredicted RBP21.99■■□□□ 1.11
LSM6-206ENST00000510331 RRP12Q5JTH9 1297 aaKnown RBP21.99■■□□□ 1.11
LSM6-206ENST00000510331 CHMP4CQ96CF2 233 aa21.99■■□□□ 1.11
LSM6-206ENST00000510331 CRISPLD2Q9H0B8 497 aa21.99■■□□□ 1.11
LSM6-206ENST00000510331 HMX1Q9NP08 348 aaPredicted RBP21.99■■□□□ 1.11
LSM6-206ENST00000510331 STX8Q9UNK0 236 aa21.99■■□□□ 1.11
LSM6-206ENST00000510331 HIP1O00291 1037 aa21.98■■□□□ 1.11
LSM6-206ENST00000510331 HOXC6P09630 235 aa21.98■■□□□ 1.11
LSM6-206ENST00000510331 FGRP09769 529 aa21.98■■□□□ 1.11
LSM6-206ENST00000510331 CCND3P30281 292 aaPredicted RBP21.98■■□□□ 1.11
LSM6-206ENST00000510331 SLFN13Q68D06 897 aa21.98■■□□□ 1.11
LSM6-206ENST00000510331 MROH8Q9H579 483 aa21.98■■□□□ 1.11
LSM6-206ENST00000510331 NEDD4P46934 1319 aa21.98■■□□□ 1.11
LSM6-206ENST00000510331 TFRCP02786 760 aaKnown RBP21.97■■□□□ 1.11
LSM6-206ENST00000510331 RIOX2Q8IUF8 465 aa21.97■■□□□ 1.11
LSM6-206ENST00000510331 DIS3LQ8TF46 1054 aaKnown RBP21.97■■□□□ 1.11
LSM6-206ENST00000510331 ISY1Q9ULR0 285 aaKnown RBP21.97■■□□□ 1.11
LSM6-206ENST00000510331 COBLO75128 1261 aa21.96■■□□□ 1.11
LSM6-206ENST00000510331 KIFC2Q96AC6 838 aa21.96■■□□□ 1.11
LSM6-206ENST00000510331 STRNO43815 780 aa21.95■■□□□ 1.1
LSM6-206ENST00000510331 SLC25A27O95847 323 aa21.95■■□□□ 1.1
LSM6-206ENST00000510331 BMP3P12645 472 aa21.95■■□□□ 1.1
LSM6-206ENST00000510331 CYP2C19P33261 490 aa21.95■■□□□ 1.1
LSM6-206ENST00000510331 STAT3P40763 770 aa21.95■■□□□ 1.1
LSM6-206ENST00000510331 SNRNP48Q6IEG0 339 aaKnown RBP21.95■■□□□ 1.1
LSM6-206ENST00000510331 DPP9Q86TI2 863 aa21.95■■□□□ 1.1
LSM6-206ENST00000510331 STAG1Q8WVM7 1258 aa21.95■■□□□ 1.1
LSM6-206ENST00000510331 GMCL1Q96IK5 515 aa21.95■■□□□ 1.1
LSM6-206ENST00000510331 TEX13BQ9BXU2 312 aa21.95■■□□□ 1.1
LSM6-206ENST00000510331 FEM1BQ9UK73 627 aa21.95■■□□□ 1.1
LSM6-206ENST00000510331 IGHA2P01877 340 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms