RNA–Protein interactions for RNA: ENST00000510199.5

RACK1-223, Transcript of receptor for activated C kinase 1, human

TSL 3

Gene RACK1, Length 1,100 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-223	ENST00000510199	WDR46	O15213	610 aa	Known RBP	13.93	□□□□□ -0.18
RACK1-223	ENST00000510199	RAD21	O60216	631 aa		13.93	□□□□□ -0.18
RACK1-223	ENST00000510199	ZBTB48	P10074	688 aa	Predicted RBP	13.93	□□□□□ -0.18
RACK1-223	ENST00000510199	BMP3	P12645	472 aa		13.93	□□□□□ -0.18
RACK1-223	ENST00000510199	CDC27	P30260	824 aa		13.93	□□□□□ -0.18
RACK1-223	ENST00000510199	ADD1	P35611	737 aa	Known RBP	13.93	□□□□□ -0.18
RACK1-223	ENST00000510199	SLC1A4	P43007	532 aa		13.93	□□□□□ -0.18
RACK1-223	ENST00000510199	GNAQ	P50148	359 aa		13.93	□□□□□ -0.18
RACK1-223	ENST00000510199	ZNF543	Q08ER8	600 aa		13.93	□□□□□ -0.18
RACK1-223	ENST00000510199	ST3GAL1	Q11201	340 aa		13.93	□□□□□ -0.18
RACK1-223	ENST00000510199	KIAA1755	Q5JYT7	1200 aa		13.93	□□□□□ -0.18
RACK1-223	ENST00000510199	CPLX2	Q6PUV4	134 aa	Known RBP	13.93	□□□□□ -0.18
RACK1-223	ENST00000510199	CCDC83	Q8IWF9	413 aa		13.93	□□□□□ -0.18
RACK1-223	ENST00000510199	HHIPL1	Q96JK4	782 aa		13.93	□□□□□ -0.18
RACK1-223	ENST00000510199	NCOA5	Q9HCD5	579 aa	Known RBP	13.93	□□□□□ -0.18
RACK1-223	ENST00000510199	EMILIN3	Q9NT22	766 aa		13.93	□□□□□ -0.18
RACK1-223	ENST00000510199	SMCHD1	A6NHR9	2005 aa		13.93	□□□□□ -0.18
RACK1-223	ENST00000510199		A0A0G2JLL6	359 aa	Predicted RBP	13.92	□□□□□ -0.18
RACK1-223	ENST00000510199	CPLX1	O14810	134 aa		13.92	□□□□□ -0.18
RACK1-223	ENST00000510199	SMARCA1	P28370	1054 aa		13.92	□□□□□ -0.18
RACK1-223	ENST00000510199	GJA5	P36382	358 aa		13.92	□□□□□ -0.18
RACK1-223	ENST00000510199	HMGCS2	P54868	508 aa		13.92	□□□□□ -0.18
RACK1-223	ENST00000510199	CCDC96	Q2M329	555 aa		13.92	□□□□□ -0.18
RACK1-223	ENST00000510199	RGMB	Q6NW40	437 aa		13.92	□□□□□ -0.18
RACK1-223	ENST00000510199	TMTC3	Q6ZXV5	915 aa		13.92	□□□□□ -0.18
RACK1-223	ENST00000510199	RASGRP2	Q7LDG7	609 aa		13.92	□□□□□ -0.18
RACK1-223	ENST00000510199	PRRT2	Q7Z6L0	340 aa	Predicted RBP	13.92	□□□□□ -0.18
RACK1-223	ENST00000510199	SPICE1	Q8N0Z3	855 aa		13.92	□□□□□ -0.18
RACK1-223	ENST00000510199	STAG2	Q8N3U4	1231 aa		13.92	□□□□□ -0.18
RACK1-223	ENST00000510199	INTS4	Q96HW7	963 aa	Known RBP	13.92	□□□□□ -0.18
RACK1-223	ENST00000510199	LZTS2	Q9BRK4	669 aa		13.92	□□□□□ -0.18
RACK1-223	ENST00000510199	LLPH	Q9BRT6	129 aa	Known RBP	13.92	□□□□□ -0.18
RACK1-223	ENST00000510199	TMOD4	Q9NZQ9	345 aa		13.92	□□□□□ -0.18
RACK1-223	ENST00000510199	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	13.92	□□□□□ -0.18
RACK1-223	ENST00000510199	FRMPD2	Q68DX3	1309 aa	Predicted RBP	13.91	□□□□□ -0.18
RACK1-223	ENST00000510199	KLRF2	D3W0D1	207 aa		13.91	□□□□□ -0.18
RACK1-223	ENST00000510199	PLA2G6	O60733	806 aa		13.91	□□□□□ -0.18
RACK1-223	ENST00000510199	CDKL5	O76039	1030 aa		13.91	□□□□□ -0.18
RACK1-223	ENST00000510199	GOLGA8H	P0CJ92	632 aa		13.91	□□□□□ -0.18
RACK1-223	ENST00000510199	IFNAR1	P17181	557 aa		13.91	□□□□□ -0.18
RACK1-223	ENST00000510199	APLP1	P51693	650 aa		13.91	□□□□□ -0.18
RACK1-223	ENST00000510199	ZNF157	P51786	506 aa	Predicted RBP	13.91	□□□□□ -0.18
RACK1-223	ENST00000510199	SNAPC2	Q13487	334 aa		13.91	□□□□□ -0.18
RACK1-223	ENST00000510199	NTRK3	Q16288	839 aa		13.91	□□□□□ -0.18
RACK1-223	ENST00000510199	SPRYD7	Q5W111	196 aa		13.91	□□□□□ -0.18
RACK1-223	ENST00000510199	KCTD1	Q719H9	257 aa		13.91	□□□□□ -0.18
RACK1-223	ENST00000510199	RASAL3	Q86YV0	1011 aa		13.91	□□□□□ -0.18
RACK1-223	ENST00000510199	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.91	□□□□□ -0.18
RACK1-223	ENST00000510199	GPCPD1	Q9NPB8	672 aa		13.91	□□□□□ -0.18
RACK1-223	ENST00000510199	ABT1	Q9ULW3	272 aa	Known RBP	13.91	□□□□□ -0.18
RACK1-223	ENST00000510199	PLEKHA8P1	O95397	391 aa		13.9	□□□□□ -0.18
RACK1-223	ENST00000510199	HSP90AA1	P07900	732 aa	Known RBP	13.9	□□□□□ -0.18
RACK1-223	ENST00000510199	VCAM1	P19320	739 aa		13.9	□□□□□ -0.18
RACK1-223	ENST00000510199	GTF2A2	P52657	109 aa		13.9	□□□□□ -0.18
RACK1-223	ENST00000510199	DGKZ	Q13574	1117 aa		13.9	□□□□□ -0.18
RACK1-223	ENST00000510199	FAM83B	Q5T0W9	1011 aa		13.9	□□□□□ -0.18
RACK1-223	ENST00000510199	BTNL9	Q6UXG8	535 aa		13.9	□□□□□ -0.18
RACK1-223	ENST00000510199	FASTKD5	Q7L8L6	764 aa	Known RBP	13.9	□□□□□ -0.18
RACK1-223	ENST00000510199	SRBD1	Q8N5C6	995 aa	Known RBP	13.9	□□□□□ -0.18
RACK1-223	ENST00000510199	CHURC1	Q8WUH1	139 aa		13.9	□□□□□ -0.18
RACK1-223	ENST00000510199	NUP88	Q99567	741 aa	Predicted RBP	13.9	□□□□□ -0.18
RACK1-223	ENST00000510199	SPZ1	Q9BXG8	430 aa		13.9	□□□□□ -0.18
RACK1-223	ENST00000510199	CREBZF	Q9NS37	354 aa		13.9	□□□□□ -0.18
RACK1-223	ENST00000510199	ISY1	Q9ULR0	285 aa	Known RBP	13.9	□□□□□ -0.18
RACK1-223	ENST00000510199	TMEM232	C9JQI7	657 aa		13.89	□□□□□ -0.19
RACK1-223	ENST00000510199	CTDNEP1	O95476	244 aa		13.89	□□□□□ -0.19
RACK1-223	ENST00000510199	SLC10A3	P09131	477 aa		13.89	□□□□□ -0.19
RACK1-223	ENST00000510199	STAT2	P52630	851 aa		13.89	□□□□□ -0.19
RACK1-223	ENST00000510199	FUT2	Q10981	343 aa		13.89	□□□□□ -0.19
RACK1-223	ENST00000510199	TTBK2	Q6IQ55	1244 aa		13.89	□□□□□ -0.19
RACK1-223	ENST00000510199	GADL1	Q6ZQY3	521 aa		13.89	□□□□□ -0.19
RACK1-223	ENST00000510199	NBPF11	Q86T75	865 aa		13.89	□□□□□ -0.19
RACK1-223	ENST00000510199	FAM160B2	Q86V87	743 aa		13.89	□□□□□ -0.19
RACK1-223	ENST00000510199	CMTR1	Q8N1G2	835 aa	Known RBP	13.89	□□□□□ -0.19
RACK1-223	ENST00000510199	NSUN7	Q8NE18	718 aa	Known RBP	13.89	□□□□□ -0.19
RACK1-223	ENST00000510199	SMARCC2	Q8TAQ2	1214 aa		13.89	□□□□□ -0.19
RACK1-223	ENST00000510199	CCDC102A	Q96A19	550 aa		13.89	□□□□□ -0.19
RACK1-223	ENST00000510199	IPO9	Q96P70	1041 aa	Known RBP	13.89	□□□□□ -0.19
RACK1-223	ENST00000510199	RNF26	Q9BY78	433 aa	Predicted RBP	13.89	□□□□□ -0.19
RACK1-223	ENST00000510199	RPAP3	Q9H6T3	665 aa	Predicted RBP	13.89	□□□□□ -0.19
RACK1-223	ENST00000510199	RIOX1	Q9H6W3	641 aa		13.89	□□□□□ -0.19
RACK1-223	ENST00000510199	DAXX	Q9UER7	740 aa	Predicted RBP	13.89	□□□□□ -0.19
RACK1-223	ENST00000510199	FEM1B	Q9UK73	627 aa		13.89	□□□□□ -0.19
RACK1-223	ENST00000510199		A0A0G2JMZ2	1700 aa		13.89	□□□□□ -0.19
RACK1-223	ENST00000510199	CNTNAP5	Q8WYK1	1306 aa		13.89	□□□□□ -0.19
RACK1-223	ENST00000510199	STK36	Q9NRP7	1315 aa		13.89	□□□□□ -0.19
RACK1-223	ENST00000510199	USP17L15	C9J2P7	530 aa		13.88	□□□□□ -0.19
RACK1-223	ENST00000510199	USP17L13	C9JLJ4	530 aa		13.88	□□□□□ -0.19
RACK1-223	ENST00000510199	USP17L11	C9JVI0	530 aa		13.88	□□□□□ -0.19
RACK1-223	ENST00000510199	USP17L18	D6R9N7	530 aa		13.88	□□□□□ -0.19
RACK1-223	ENST00000510199	USP17L22	D6RA61	530 aa		13.88	□□□□□ -0.19
RACK1-223	ENST00000510199	USP17L17	D6RBQ6	530 aa		13.88	□□□□□ -0.19
RACK1-223	ENST00000510199	USP17L19	D6RCP7	530 aa		13.88	□□□□□ -0.19
RACK1-223	ENST00000510199	USP17L20	D6RJB6	530 aa		13.88	□□□□□ -0.19
RACK1-223	ENST00000510199	CYTH3	O43739	400 aa		13.88	□□□□□ -0.19
RACK1-223	ENST00000510199	CETP	P11597	493 aa		13.88	□□□□□ -0.19
RACK1-223	ENST00000510199	HMGN5	P82970	282 aa	Known RBP	13.88	□□□□□ -0.19
RACK1-223	ENST00000510199	SSRP1	Q08945	709 aa	Known RBP	13.88	□□□□□ -0.19
RACK1-223	ENST00000510199	USP17L24	Q0WX57	530 aa		13.88	□□□□□ -0.19
RACK1-223	ENST00000510199	MOGS	Q13724	837 aa		13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms