RNA–Protein interactions for RNA: ENST00000509860.1

PRDM16-205, Transcript of PR/SET domain 16, humanhuman

TSL 5

Gene PRDM16, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-205ENST00000509860 CDAN1Q8IWY9 1227 aa14.35□□□□□ -0.11
PRDM16-205ENST00000509860 LRRC47Q8N1G4 583 aaKnown RBP14.35□□□□□ -0.11
PRDM16-205ENST00000509860 GOLGA6L4A6NEF3 574 aa14.35□□□□□ -0.11
PRDM16-205ENST00000509860 G3V3G9 751 aa14.35□□□□□ -0.11
PRDM16-205ENST00000509860 RAD17O75943 681 aa14.35□□□□□ -0.11
PRDM16-205ENST00000509860 KRT2P35908 639 aa14.35□□□□□ -0.11
PRDM16-205ENST00000509860 IL17AQ16552 155 aa14.35□□□□□ -0.11
PRDM16-205ENST00000509860 DCAF8Q5TAQ9 597 aa14.35□□□□□ -0.11
PRDM16-205ENST00000509860 TATDN1Q6P1N9 297 aa14.35□□□□□ -0.11
PRDM16-205ENST00000509860 RSBN1LQ6PCB5 846 aaPredicted RBP14.35□□□□□ -0.11
PRDM16-205ENST00000509860 MTMR7Q9Y216 660 aa14.35□□□□□ -0.11
PRDM16-205ENST00000509860 SPECC1Q5M775 1068 aa14.35□□□□□ -0.11
PRDM16-205ENST00000509860 USP49Q70CQ1 688 aa14.35□□□□□ -0.11
PRDM16-205ENST00000509860 NFKBIEO00221 500 aa14.34□□□□□ -0.11
PRDM16-205ENST00000509860 NPM3O75607 178 aaKnown RBP14.34□□□□□ -0.11
PRDM16-205ENST00000509860 TOP1P11387 765 aaKnown RBP14.34□□□□□ -0.11
PRDM16-205ENST00000509860 TMEM51Q9NW97 253 aa14.34□□□□□ -0.11
PRDM16-205ENST00000509860 PGAP2Q9UHJ9 254 aa14.34□□□□□ -0.11
PRDM16-205ENST00000509860 PTGER2P43116 358 aa14.34□□□□□ -0.11
PRDM16-205ENST00000509860 RTKN2Q8IZC4 609 aa14.34□□□□□ -0.11
PRDM16-205ENST00000509860 SUPT20HQ8NEM7 779 aa14.34□□□□□ -0.11
PRDM16-205ENST00000509860 SPZ1Q9BXG8 430 aa14.34□□□□□ -0.11
PRDM16-205ENST00000509860 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.34□□□□□ -0.11
PRDM16-205ENST00000509860 A0A087X0B3 334 aa14.33□□□□□ -0.11
PRDM16-205ENST00000509860 CCDC173Q0VFZ6 552 aa14.33□□□□□ -0.11
PRDM16-205ENST00000509860 ANO6Q4KMQ2 910 aa14.33□□□□□ -0.11
PRDM16-205ENST00000509860 MORC2Q9Y6X9 1032 aaPredicted RBP14.33□□□□□ -0.11
PRDM16-205ENST00000509860 FRMPD2Q68DX3 1309 aaPredicted RBP14.33□□□□□ -0.11
PRDM16-205ENST00000509860 KLRF2D3W0D1 207 aa14.33□□□□□ -0.12
PRDM16-205ENST00000509860 EDIL3O43854 480 aa14.33□□□□□ -0.12
PRDM16-205ENST00000509860 PPP1R11O60927 126 aaPredicted RBP14.33□□□□□ -0.12
PRDM16-205ENST00000509860 KIF5BP33176 963 aa14.33□□□□□ -0.12
PRDM16-205ENST00000509860 CCDC178Q5BJE1 867 aa14.33□□□□□ -0.12
PRDM16-205ENST00000509860 C4orf32Q8N8J7 132 aa14.33□□□□□ -0.12
PRDM16-205ENST00000509860 RASGRP4Q8TDF6 673 aa14.33□□□□□ -0.12
PRDM16-205ENST00000509860 ZBED3Q96IU2 234 aaPredicted RBP14.33□□□□□ -0.12
PRDM16-205ENST00000509860 SWAP70Q9UH65 585 aa14.33□□□□□ -0.12
PRDM16-205ENST00000509860 SPDYE2BA6NHP3 402 aa14.33□□□□□ -0.12
PRDM16-205ENST00000509860 ZNF202O95125 648 aa14.33□□□□□ -0.12
PRDM16-205ENST00000509860 SPDYE6P0CI01 402 aa14.33□□□□□ -0.12
PRDM16-205ENST00000509860 PTPREP23469 700 aa14.33□□□□□ -0.12
PRDM16-205ENST00000509860 RILPL1Q5EBL4 403 aa14.33□□□□□ -0.12
PRDM16-205ENST00000509860 LUZP1Q86V48 1076 aa14.32□□□□□ -0.12
PRDM16-205ENST00000509860 RIOX1Q9H6W3 641 aa14.32□□□□□ -0.12
PRDM16-205ENST00000509860 ZNF287Q9HBT7 754 aa14.32□□□□□ -0.12
PRDM16-205ENST00000509860 CBX8Q9HC52 389 aa14.32□□□□□ -0.12
PRDM16-205ENST00000509860 BARHL2Q9NY43 387 aa14.32□□□□□ -0.12
PRDM16-205ENST00000509860 MDM2Q00987 491 aaPredicted RBP14.32□□□□□ -0.12
PRDM16-205ENST00000509860 PCDHA6Q9UN73 950 aa14.32□□□□□ -0.12
PRDM16-205ENST00000509860 PCDHA8Q9Y5H6 950 aa14.32□□□□□ -0.12
PRDM16-205ENST00000509860 FOXN1O15353 648 aa14.32□□□□□ -0.12
PRDM16-205ENST00000509860 CCDC192P0DO97 292 aa14.32□□□□□ -0.12
PRDM16-205ENST00000509860 CDK11BP21127 795 aaKnown RBP14.32□□□□□ -0.12
PRDM16-205ENST00000509860 TGFB2P61812 414 aa14.32□□□□□ -0.12
PRDM16-205ENST00000509860 IQCB1Q15051 598 aa14.32□□□□□ -0.12
PRDM16-205ENST00000509860 FOXP4Q8IVH2 680 aaPredicted RBP14.32□□□□□ -0.12
PRDM16-205ENST00000509860 MTFR1LQ9H019 292 aa14.32□□□□□ -0.12
PRDM16-205ENST00000509860 SH3GLB2Q9NR46 395 aa14.32□□□□□ -0.12
PRDM16-205ENST00000509860 GNL2Q13823 731 aaKnown RBP14.31□□□□□ -0.12
PRDM16-205ENST00000509860 UBA5Q9GZZ9 404 aa14.31□□□□□ -0.12
PRDM16-205ENST00000509860 DNAJC25Q9H1X3 360 aa14.31□□□□□ -0.12
PRDM16-205ENST00000509860 RBM5P52756 815 aaKnown RBP eCLIP14.31□□□□□ -0.12
PRDM16-205ENST00000509860 R3HDM1Q15032 1099 aaKnown RBP14.31□□□□□ -0.12
PRDM16-205ENST00000509860 LONRF3Q496Y0 759 aa14.31□□□□□ -0.12
PRDM16-205ENST00000509860 DAGLBQ8NCG7 672 aa14.31□□□□□ -0.12
PRDM16-205ENST00000509860 USP25Q9UHP3 1055 aa14.31□□□□□ -0.12
PRDM16-205ENST00000509860 CUTAO60888 179 aa14.31□□□□□ -0.12
PRDM16-205ENST00000509860 EGFRP00533 1210 aa14.31□□□□□ -0.12
PRDM16-205ENST00000509860 SAFBQ15424 915 aaKnown RBP eCLIP14.31□□□□□ -0.12
PRDM16-205ENST00000509860 TTBK2Q6IQ55 1244 aa14.31□□□□□ -0.12
PRDM16-205ENST00000509860 CCDC73Q6ZRK6 1079 aa14.31□□□□□ -0.12
PRDM16-205ENST00000509860 PCDHA4Q9UN74 947 aa14.31□□□□□ -0.12
PRDM16-205ENST00000509860 SRPRBQ9Y5M8 271 aaKnown RBP14.31□□□□□ -0.12
PRDM16-205ENST00000509860 AKAP17AQ02040 695 aaKnown RBP14.3□□□□□ -0.12
PRDM16-205ENST00000509860 PIK3AP1Q6ZUJ8 805 aa14.3□□□□□ -0.12
PRDM16-205ENST00000509860 CCDC125Q86Z20 511 aa14.3□□□□□ -0.12
PRDM16-205ENST00000509860 DHX40Q8IX18 779 aaKnown RBP14.3□□□□□ -0.12
PRDM16-205ENST00000509860 KRI1Q8N9T8 703 aaKnown RBP14.3□□□□□ -0.12
PRDM16-205ENST00000509860 PIGSQ96S52 555 aa14.3□□□□□ -0.12
PRDM16-205ENST00000509860 CSRNP2Q9H175 543 aa14.3□□□□□ -0.12
PRDM16-205ENST00000509860 CLIP2Q9UDT6 1046 aa14.3□□□□□ -0.12
PRDM16-205ENST00000509860 SMCHD1A6NHR9 2005 aa14.3□□□□□ -0.12
PRDM16-205ENST00000509860 MYH7BA7E2Y1 1941 aa14.3□□□□□ -0.12
PRDM16-205ENST00000509860 TTLL1O95922 423 aa14.3□□□□□ -0.12
PRDM16-205ENST00000509860 PARP1P09874 1014 aaKnown RBP14.3□□□□□ -0.12
PRDM16-205ENST00000509860 GRIPAP1Q4V328 841 aa14.3□□□□□ -0.12
PRDM16-205ENST00000509860 LARGE2Q8N3Y3 721 aa14.3□□□□□ -0.12
PRDM16-205ENST00000509860 PTMAP06454 111 aaKnown RBP14.3□□□□□ -0.12
PRDM16-205ENST00000509860 CXCL9Q07325 125 aa14.3□□□□□ -0.12
PRDM16-205ENST00000509860 UVSSAQ2YD98 709 aa14.3□□□□□ -0.12
PRDM16-205ENST00000509860 CNPY4Q8N129 248 aa14.3□□□□□ -0.12
PRDM16-205ENST00000509860 FAM200AQ8TCP9 573 aa14.3□□□□□ -0.12
PRDM16-205ENST00000509860 PIM2Q9P1W9 311 aa14.3□□□□□ -0.12
PRDM16-205ENST00000509860 BLIDQ8IZY5 108 aa14.29□□□□□ -0.12
PRDM16-205ENST00000509860 PI4KBQ9UBF8 816 aa14.29□□□□□ -0.12
PRDM16-205ENST00000509860 DICER1Q9UPY3 1922 aaKnown RBP14.29□□□□□ -0.12
PRDM16-205ENST00000509860 ZNF543Q08ER8 600 aa14.29□□□□□ -0.12
PRDM16-205ENST00000509860 MTMR8Q96EF0 704 aa14.29□□□□□ -0.12
PRDM16-205ENST00000509860 ZMYND12Q9H0C1 365 aa14.29□□□□□ -0.12
PRDM16-205ENST00000509860 DHX36Q9H2U1 1008 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms