RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 LCTP09848 1927 aa16.17■□□□□ 0.18
DDX41-210ENST00000509576 TRIM43BA6NCK2 446 aa16.16■□□□□ 0.18
DDX41-210ENST00000509576 SEPT4O43236 478 aa16.16■□□□□ 0.18
DDX41-210ENST00000509576 FLOT1O75955 427 aa16.16■□□□□ 0.18
DDX41-210ENST00000509576 PGK2P07205 417 aa16.16■□□□□ 0.18
DDX41-210ENST00000509576 IFIT2P09913 472 aaKnown RBP16.16■□□□□ 0.18
DDX41-210ENST00000509576 HSP90AB4PQ58FF6 505 aa16.16■□□□□ 0.18
DDX41-210ENST00000509576 CTR9Q6PD62 1173 aa16.16■□□□□ 0.18
DDX41-210ENST00000509576 SLC39A5Q6ZMH5 540 aa16.16■□□□□ 0.18
DDX41-210ENST00000509576 DPP9Q86TI2 863 aa16.16■□□□□ 0.18
DDX41-210ENST00000509576 TRIM43Q96BQ3 446 aaPredicted RBP16.16■□□□□ 0.18
DDX41-210ENST00000509576 HOXC10Q9NYD6 342 aa16.16■□□□□ 0.18
DDX41-210ENST00000509576 SWAP70Q9UH65 585 aa16.16■□□□□ 0.18
DDX41-210ENST00000509576 ZNF214Q9UL59 606 aaPredicted RBP16.16■□□□□ 0.18
DDX41-210ENST00000509576 STRNO43815 780 aa16.15■□□□□ 0.18
DDX41-210ENST00000509576 MSCO60682 206 aa16.15■□□□□ 0.18
DDX41-210ENST00000509576 IRX5P78411 483 aaPredicted RBP16.15■□□□□ 0.18
DDX41-210ENST00000509576 PLS1Q14651 629 aa16.15■□□□□ 0.18
DDX41-210ENST00000509576 LRRC41Q15345 812 aa16.15■□□□□ 0.18
DDX41-210ENST00000509576 SHHQ15465 462 aa16.15■□□□□ 0.18
DDX41-210ENST00000509576 TRIM60Q495X7 471 aa16.15■□□□□ 0.18
DDX41-210ENST00000509576 NCAPG2Q86XI2 1143 aa16.15■□□□□ 0.18
DDX41-210ENST00000509576 FERMT2Q96AC1 680 aa16.15■□□□□ 0.18
DDX41-210ENST00000509576 FAM161BQ96MY7 647 aa16.15■□□□□ 0.18
DDX41-210ENST00000509576 PDLIM7Q9NR12 457 aa16.15■□□□□ 0.18
DDX41-210ENST00000509576 ATP8A2Q9NTI2 1148 aa16.15■□□□□ 0.18
DDX41-210ENST00000509576 ATP11BQ9Y2G3 1177 aa16.15■□□□□ 0.18
DDX41-210ENST00000509576 LRRC37A2A6NM11 1700 aa16.14■□□□□ 0.17
DDX41-210ENST00000509576 ADCYAP1R1P41586 468 aa16.14■□□□□ 0.17
DDX41-210ENST00000509576 EPHB4P54760 987 aa16.14■□□□□ 0.17
DDX41-210ENST00000509576 SAMD1Q6SPF0 538 aaPredicted RBP16.14■□□□□ 0.17
DDX41-210ENST00000509576 ABRAQ8N0Z2 381 aa16.14■□□□□ 0.17
DDX41-210ENST00000509576 NUP88Q99567 741 aaPredicted RBP16.14■□□□□ 0.17
DDX41-210ENST00000509576 WDR46O15213 610 aaKnown RBP16.13■□□□□ 0.17
DDX41-210ENST00000509576 RAB11FIP3O75154 756 aa16.13■□□□□ 0.17
DDX41-210ENST00000509576 UBE3CQ15386 1083 aa16.13■□□□□ 0.17
DDX41-210ENST00000509576 ZNF792Q3KQV3 632 aa16.13■□□□□ 0.17
DDX41-210ENST00000509576 TSHZ3Q63HK5 1081 aa16.13■□□□□ 0.17
DDX41-210ENST00000509576 MB21D1Q8N884 522 aa16.13■□□□□ 0.17
DDX41-210ENST00000509576 MROH8Q9H579 483 aa16.13■□□□□ 0.17
DDX41-210ENST00000509576 ARHGEF10LQ9HCE6 1279 aa16.13■□□□□ 0.17
DDX41-210ENST00000509576 EPB41L4AQ9HCS5 686 aaPredicted RBP16.13■□□□□ 0.17
DDX41-210ENST00000509576 RIPK3Q9Y572 518 aa16.13■□□□□ 0.17
DDX41-210ENST00000509576 GSG1L2A8MUP6 293 aa16.12■□□□□ 0.17
DDX41-210ENST00000509576 VWA5AO00534 786 aa16.12■□□□□ 0.17
DDX41-210ENST00000509576 ADCY6O43306 1168 aa16.12■□□□□ 0.17
DDX41-210ENST00000509576 ZNF865P0CJ78 1059 aaPredicted RBP16.12■□□□□ 0.17
DDX41-210ENST00000509576 RASA1P20936 1047 aa16.12■□□□□ 0.17
DDX41-210ENST00000509576 FAM83BQ5T0W9 1011 aa16.12■□□□□ 0.17
DDX41-210ENST00000509576 RIOX2Q8IUF8 465 aa16.12■□□□□ 0.17
DDX41-210ENST00000509576 BADQ92934 168 aa16.12■□□□□ 0.17
DDX41-210ENST00000509576 FGD4Q96M96 766 aa16.12■□□□□ 0.17
DDX41-210ENST00000509576 PPP1R9AQ9ULJ8 1098 aa16.12■□□□□ 0.17
DDX41-210ENST00000509576 DDX19BQ9UMR2 479 aa16.12■□□□□ 0.17
DDX41-210ENST00000509576 SLC4A4Q9Y6R1 1079 aa16.12■□□□□ 0.17
DDX41-210ENST00000509576 GBF1Q92538 1859 aa16.12■□□□□ 0.17
DDX41-210ENST00000509576 ROBO3Q96MS0 1386 aa16.12■□□□□ 0.17
DDX41-210ENST00000509576 PGK1P00558 417 aa16.11■□□□□ 0.17
DDX41-210ENST00000509576 FAM109BQ6ICB4 259 aaPredicted RBP16.11■□□□□ 0.17
DDX41-210ENST00000509576 STK11IPQ8N1F8 1099 aa16.11■□□□□ 0.17
DDX41-210ENST00000509576 OSBP2Q969R2 916 aa16.11■□□□□ 0.17
DDX41-210ENST00000509576 CCDC17Q96LX7 622 aa16.11■□□□□ 0.17
DDX41-210ENST00000509576 STRBPQ96SI9 672 aaKnown RBP16.11■□□□□ 0.17
DDX41-210ENST00000509576 TTYH1Q9H313 450 aaPredicted RBP16.11■□□□□ 0.17
DDX41-210ENST00000509576 PHF24Q9UPV7 400 aa16.11■□□□□ 0.17
DDX41-210ENST00000509576 MUC3AQ02505 3323 aa16.11■□□□□ 0.17
DDX41-210ENST00000509576 CHD9Q3L8U1 2897 aa16.1■□□□□ 0.17
DDX41-210ENST00000509576 IGKV6D-41A0A0C4DH26 115 aa16.1■□□□□ 0.17
DDX41-210ENST00000509576 MYADML2A6NDP7 307 aa16.1■□□□□ 0.17
DDX41-210ENST00000509576 ADAMTS4O75173 837 aa16.1■□□□□ 0.17
DDX41-210ENST00000509576 MYCNP04198 464 aaPredicted RBP16.1■□□□□ 0.17
DDX41-210ENST00000509576 FCER1AP12319 257 aa16.1■□□□□ 0.17
DDX41-210ENST00000509576 TLE2Q04725 743 aa16.1■□□□□ 0.17
DDX41-210ENST00000509576 ARRDC4Q8NCT1 418 aa16.1■□□□□ 0.17
DDX41-210ENST00000509576 MMP19Q99542 508 aa16.1■□□□□ 0.17
DDX41-210ENST00000509576 TINF2Q9BSI4 451 aa16.1■□□□□ 0.17
DDX41-210ENST00000509576 COL25A1Q9BXS0 654 aaPredicted RBP16.1■□□□□ 0.17
DDX41-210ENST00000509576 PRDM5Q9NQX1 630 aaPredicted RBP16.1■□□□□ 0.17
DDX41-210ENST00000509576 REV3LO60673 3130 aa16.09■□□□□ 0.17
DDX41-210ENST00000509576 DNAJC25-GNG10A0A024R161 153 aa16.09■□□□□ 0.17
DDX41-210ENST00000509576 KBTBD13C9JR72 458 aa16.09■□□□□ 0.17
DDX41-210ENST00000509576 HMMRO75330 724 aa16.09■□□□□ 0.17
DDX41-210ENST00000509576 SNAI1O95863 264 aaPredicted RBP16.09■□□□□ 0.17
DDX41-210ENST00000509576 C1orf53Q5VUE5 145 aa16.09■□□□□ 0.17
DDX41-210ENST00000509576 LBHD1Q9BQE6 289 aaPredicted RBP16.09■□□□□ 0.17
DDX41-210ENST00000509576 KANSL2Q9H9L4 492 aa16.09■□□□□ 0.17
DDX41-210ENST00000509576 M0R2C6 588 aa16.08■□□□□ 0.16
DDX41-210ENST00000509576 NDUFB10O96000 172 aa16.08■□□□□ 0.16
DDX41-210ENST00000509576 STAT3P40763 770 aa16.08■□□□□ 0.16
DDX41-210ENST00000509576 SBK1Q52WX2 424 aa16.08■□□□□ 0.16
DDX41-210ENST00000509576 DIEXFQ68CQ4 756 aaKnown RBP16.08■□□□□ 0.16
DDX41-210ENST00000509576 CCSAPQ6IQ19 270 aaPredicted RBP16.08■□□□□ 0.16
DDX41-210ENST00000509576 XPNPEP3Q9NQH7 507 aa16.08■□□□□ 0.16
DDX41-210ENST00000509576 A0A1W2PQ45 241 aaPredicted RBP16.07■□□□□ 0.16
DDX41-210ENST00000509576 A0A1W2PQY0 241 aa16.07■□□□□ 0.16
DDX41-210ENST00000509576 SLC25A27O95847 323 aa16.07■□□□□ 0.16
DDX41-210ENST00000509576 SEC62Q99442 399 aaKnown RBP16.07■□□□□ 0.16
DDX41-210ENST00000509576 CDX2Q99626 313 aaPredicted RBP16.07■□□□□ 0.16
DDX41-210ENST00000509576 LRRCC1Q9C099 1032 aa16.07■□□□□ 0.16
DDX41-210ENST00000509576 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.07■□□□□ 0.162e-6■□□□□ 10.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms