RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 TTC41PQ6P2S7 1318 aa18.39■□□□□ 0.53
TPM3-219ENST00000509409 A0A1W2PPC1 479 aa18.38■□□□□ 0.53
TPM3-219ENST00000509409 M0R2C6 588 aa18.38■□□□□ 0.53
TPM3-219ENST00000509409 COL6A1P12109 1028 aa18.38■□□□□ 0.53
TPM3-219ENST00000509409 STAT3P40763 770 aa18.38■□□□□ 0.53
TPM3-219ENST00000509409 ABRAQ8N0Z2 381 aa18.38■□□□□ 0.53
TPM3-219ENST00000509409 TRPV1Q8NER1 839 aa18.38■□□□□ 0.53
TPM3-219ENST00000509409 MMP19Q99542 508 aa18.38■□□□□ 0.53
TPM3-219ENST00000509409 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.38■□□□□ 0.53
TPM3-219ENST00000509409 CLIP2Q9UDT6 1046 aa18.38■□□□□ 0.53
TPM3-219ENST00000509409 PPP1R9AQ9ULJ8 1098 aa18.38■□□□□ 0.53
TPM3-219ENST00000509409 MYCNP04198 464 aaPredicted RBP18.37■□□□□ 0.53
TPM3-219ENST00000509409 LRRC26Q2I0M4 334 aa18.37■□□□□ 0.53
TPM3-219ENST00000509409 PRAMEF19Q5SWL8 479 aa18.37■□□□□ 0.53
TPM3-219ENST00000509409 GDF15Q99988 308 aa18.37■□□□□ 0.53
TPM3-219ENST00000509409 FSD1Q9BTV5 496 aa18.37■□□□□ 0.53
TPM3-219ENST00000509409 NACAP1Q9BZK3 213 aa18.37■□□□□ 0.53
TPM3-219ENST00000509409 NYAP2Q9P242 653 aa18.37■□□□□ 0.53
TPM3-219ENST00000509409 CTDP1Q9Y5B0 961 aaPredicted RBP18.37■□□□□ 0.53
TPM3-219ENST00000509409 VWA5AO00534 786 aa18.36■□□□□ 0.53
TPM3-219ENST00000509409 PRDM1O75626 825 aa18.36■□□□□ 0.53
TPM3-219ENST00000509409 CYBAP13498 195 aa18.36■□□□□ 0.53
TPM3-219ENST00000509409 BMP8BP34820 402 aa18.36■□□□□ 0.53
TPM3-219ENST00000509409 MAGEA10P43363 369 aaPredicted RBP18.36■□□□□ 0.53
TPM3-219ENST00000509409 SLC4A3P48751 1232 aa18.36■□□□□ 0.53
TPM3-219ENST00000509409 ATN1P54259 1190 aaPredicted RBP18.36■□□□□ 0.53
TPM3-219ENST00000509409 RRP1P56182 461 aaKnown RBP18.36■□□□□ 0.53
TPM3-219ENST00000509409 GJC2Q5T442 439 aaPredicted RBP18.36■□□□□ 0.53
TPM3-219ENST00000509409 ANO1Q5XXA6 986 aa18.36■□□□□ 0.53
TPM3-219ENST00000509409 RIOX2Q8IUF8 465 aa18.36■□□□□ 0.53
TPM3-219ENST00000509409 IFNL3Q8IZI9 196 aa18.36■□□□□ 0.53
TPM3-219ENST00000509409 ARRDC4Q8NCT1 418 aa18.36■□□□□ 0.53
TPM3-219ENST00000509409 OTUD7AQ8TE49 926 aaPredicted RBP18.36■□□□□ 0.53
TPM3-219ENST00000509409 SEC62Q99442 399 aaKnown RBP18.36■□□□□ 0.53
TPM3-219ENST00000509409 NUP88Q99567 741 aaPredicted RBP18.36■□□□□ 0.53
TPM3-219ENST00000509409 EPB41L4AQ9HCS5 686 aaPredicted RBP18.36■□□□□ 0.53
TPM3-219ENST00000509409 BAZ2AQ9UIF9 1905 aaKnown RBP18.36■□□□□ 0.53
TPM3-219ENST00000509409 ADAMTS5Q9UNA0 930 aa18.36■□□□□ 0.53
TPM3-219ENST00000509409 F5H6K3 240 aa18.35■□□□□ 0.53
TPM3-219ENST00000509409 KLRC3Q07444 240 aa18.35■□□□□ 0.53
TPM3-219ENST00000509409 KCTD2Q14681 263 aa18.35■□□□□ 0.53
TPM3-219ENST00000509409 ANKRD45Q5TZF3 282 aa18.35■□□□□ 0.53
TPM3-219ENST00000509409 MAML3Q96JK9 1138 aa18.35■□□□□ 0.53
TPM3-219ENST00000509409 SLF1Q9BQI6 1058 aa18.35■□□□□ 0.53
TPM3-219ENST00000509409 KBTBD13C9JR72 458 aa18.34■□□□□ 0.53
TPM3-219ENST00000509409 DNM1LO00429 736 aa18.34■□□□□ 0.53
TPM3-219ENST00000509409 SEPT4O43236 478 aa18.34■□□□□ 0.53
TPM3-219ENST00000509409 IGHA2P01877 340 aa18.34■□□□□ 0.53
TPM3-219ENST00000509409 PGK2P07205 417 aa18.34■□□□□ 0.53
TPM3-219ENST00000509409 SLC3A2P08195 630 aaKnown RBP18.34■□□□□ 0.53
TPM3-219ENST00000509409 MX1P20591 662 aa18.34■□□□□ 0.53
TPM3-219ENST00000509409 COPB2P35606 906 aa18.34■□□□□ 0.53
TPM3-219ENST00000509409 PDE4BQ07343 736 aa18.34■□□□□ 0.53
TPM3-219ENST00000509409 PI4K2BQ8TCG2 481 aa18.34■□□□□ 0.53
TPM3-219ENST00000509409 UBE2OQ9C0C9 1292 aaKnown RBP18.34■□□□□ 0.53
TPM3-219ENST00000509409 NAPBQ9H115 298 aa18.34■□□□□ 0.53
TPM3-219ENST00000509409 RANBP2P49792 3224 aaKnown RBP18.33■□□□□ 0.53
TPM3-219ENST00000509409 ZBED4O75132 1171 aa18.33■□□□□ 0.52
TPM3-219ENST00000509409 NDUFB10O96000 172 aa18.33■□□□□ 0.52
TPM3-219ENST00000509409 PRPF38AQ8NAV1 312 aaKnown RBP18.33■□□□□ 0.52
TPM3-219ENST00000509409 CRBNQ96SW2 442 aa18.33■□□□□ 0.52
TPM3-219ENST00000509409 ISY1Q9ULR0 285 aaKnown RBP18.33■□□□□ 0.52
TPM3-219ENST00000509409 SOX1O00570 391 aaPredicted RBP18.32■□□□□ 0.52
TPM3-219ENST00000509409 TSPY3P0CV98 308 aa18.32■□□□□ 0.52
TPM3-219ENST00000509409 TSPY8P0CW00 308 aa18.32■□□□□ 0.52
TPM3-219ENST00000509409 MDM2Q00987 491 aaPredicted RBP18.32■□□□□ 0.52
TPM3-219ENST00000509409 ZMYM1Q5SVZ6 1142 aa18.32■□□□□ 0.52
TPM3-219ENST00000509409 CPXCR1Q8N123 301 aa18.32■□□□□ 0.52
TPM3-219ENST00000509409 KIFC2Q96AC6 838 aa18.32■□□□□ 0.52
TPM3-219ENST00000509409 CEP95Q96GE4 821 aa18.32■□□□□ 0.52
TPM3-219ENST00000509409 LRCH3Q96II8 777 aa18.32■□□□□ 0.52
TPM3-219ENST00000509409 MTMR4Q9NYA4 1195 aa18.32■□□□□ 0.52
TPM3-219ENST00000509409 PRKAG2Q9UGJ0 569 aa18.32■□□□□ 0.52
TPM3-219ENST00000509409 ROBO3Q96MS0 1386 aa18.31■□□□□ 0.52
TPM3-219ENST00000509409 IGKV6D-41A0A0C4DH26 115 aa18.31■□□□□ 0.52
TPM3-219ENST00000509409 TTLL1O95922 423 aa18.31■□□□□ 0.52
TPM3-219ENST00000509409 TFAP4Q01664 338 aa18.31■□□□□ 0.52
TPM3-219ENST00000509409 FAM47AQ5JRC9 791 aa18.31■□□□□ 0.52
TPM3-219ENST00000509409 SNRNP48Q6IEG0 339 aaKnown RBP18.31■□□□□ 0.52
TPM3-219ENST00000509409 REPS2Q8NFH8 660 aa18.31■□□□□ 0.52
TPM3-219ENST00000509409 MKL1Q969V6 931 aa18.31■□□□□ 0.52
TPM3-219ENST00000509409 DDX11Q96FC9 970 aa18.31■□□□□ 0.52
TPM3-219ENST00000509409 LBHD1Q9BQE6 289 aaPredicted RBP18.31■□□□□ 0.52
TPM3-219ENST00000509409 TINF2Q9BSI4 451 aa18.31■□□□□ 0.52
TPM3-219ENST00000509409 TEX13BQ9BXU2 312 aa18.31■□□□□ 0.52
TPM3-219ENST00000509409 ZNF214Q9UL59 606 aaPredicted RBP18.31■□□□□ 0.52
TPM3-219ENST00000509409 ATP11BQ9Y2G3 1177 aa18.31■□□□□ 0.52
TPM3-219ENST00000509409 DIS3Q9Y2L1 958 aaKnown RBP18.31■□□□□ 0.52
TPM3-219ENST00000509409 MYH7P12883 1935 aa18.3■□□□□ 0.52
TPM3-219ENST00000509409 RTP1P59025 263 aa18.3■□□□□ 0.52
TPM3-219ENST00000509409 PPARAQ07869 468 aa18.3■□□□□ 0.52
TPM3-219ENST00000509409 ZNF792Q3KQV3 632 aa18.3■□□□□ 0.52
TPM3-219ENST00000509409 TDHQ8IZJ6 230 aa18.3■□□□□ 0.52
TPM3-219ENST00000509409 LRRC47Q8N1G4 583 aaKnown RBP18.3■□□□□ 0.52
TPM3-219ENST00000509409 FEM1BQ9UK73 627 aa18.3■□□□□ 0.52
TPM3-219ENST00000509409 MYH8P13535 1937 aa18.29■□□□□ 0.52
TPM3-219ENST00000509409 RARBP10826 455 aa18.29■□□□□ 0.52
TPM3-219ENST00000509409 LRRC41Q15345 812 aa18.29■□□□□ 0.52
TPM3-219ENST00000509409 SLFN13Q68D06 897 aa18.29■□□□□ 0.52
TPM3-219ENST00000509409 SLC39A5Q6ZMH5 540 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms