RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 CENPQQ7L2Z9 268 aaPredicted RBP19.12■□□□□ 0.65
PDLIM5-212ENST00000509333 NKX2-3Q8TAU0 364 aa19.12■□□□□ 0.65
PDLIM5-212ENST00000509333 DSCC1Q9BVC3 393 aa19.12■□□□□ 0.65
PDLIM5-212ENST00000509333 SPATC1LQ9H0A9 340 aa19.12■□□□□ 0.65
PDLIM5-212ENST00000509333 TCP11L1Q9NUJ3 509 aa19.12■□□□□ 0.65
PDLIM5-212ENST00000509333 RLFQ13129 1914 aa19.12■□□□□ 0.65
PDLIM5-212ENST00000509333 GREB1LQ9C091 1923 aaPredicted RBP19.12■□□□□ 0.65
PDLIM5-212ENST00000509333 PLIN4Q96Q06 1357 aa19.11■□□□□ 0.65
PDLIM5-212ENST00000509333 ZNF213O14771 459 aa19.11■□□□□ 0.65
PDLIM5-212ENST00000509333 PTPREP23469 700 aa19.11■□□□□ 0.65
PDLIM5-212ENST00000509333 UBXN2AP68543 259 aa19.11■□□□□ 0.65
PDLIM5-212ENST00000509333 TMEM132BQ14DG7 1078 aa19.11■□□□□ 0.65
PDLIM5-212ENST00000509333 SLFN13Q68D06 897 aa19.11■□□□□ 0.65
PDLIM5-212ENST00000509333 MFSD6Q6ZSS7 791 aa19.11■□□□□ 0.65
PDLIM5-212ENST00000509333 GMCL1P1Q8NEA9 526 aa19.11■□□□□ 0.65
PDLIM5-212ENST00000509333 PPP1R9AQ9ULJ8 1098 aa19.11■□□□□ 0.65
PDLIM5-212ENST00000509333 SLC15A5A6NIM6 579 aa19.1■□□□□ 0.65
PDLIM5-212ENST00000509333 VWA5AO00534 786 aa19.1■□□□□ 0.65
PDLIM5-212ENST00000509333 PCP11498 1178 aaKnown RBP19.1■□□□□ 0.65
PDLIM5-212ENST00000509333 CCL5P13501 91 aa19.1■□□□□ 0.65
PDLIM5-212ENST00000509333 PPP4R3BQ5MIZ7 849 aa19.1■□□□□ 0.65
PDLIM5-212ENST00000509333 PRPF38AQ8NAV1 312 aaKnown RBP19.1■□□□□ 0.65
PDLIM5-212ENST00000509333 SHCBP1Q8NEM2 672 aa19.1■□□□□ 0.65
PDLIM5-212ENST00000509333 STAG1Q8WVM7 1258 aa19.1■□□□□ 0.65
PDLIM5-212ENST00000509333 STRNO43815 780 aa19.09■□□□□ 0.65
PDLIM5-212ENST00000509333 INHAP05111 366 aa19.09■□□□□ 0.65
PDLIM5-212ENST00000509333 GJB1P08034 283 aa19.09■□□□□ 0.65
PDLIM5-212ENST00000509333 MAP2K5Q13163 448 aa19.09■□□□□ 0.65
PDLIM5-212ENST00000509333 RRP12Q5JTH9 1297 aaKnown RBP19.09■□□□□ 0.65
PDLIM5-212ENST00000509333 SAMD1Q6SPF0 538 aaPredicted RBP19.09■□□□□ 0.65
PDLIM5-212ENST00000509333 TBC1D10CQ8IV04 446 aa19.09■□□□□ 0.65
PDLIM5-212ENST00000509333 LRRC47Q8N1G4 583 aaKnown RBP19.09■□□□□ 0.65
PDLIM5-212ENST00000509333 REPS2Q8NFH8 660 aa19.09■□□□□ 0.65
PDLIM5-212ENST00000509333 RNF208Q9H0X6 261 aa19.09■□□□□ 0.65
PDLIM5-212ENST00000509333 UNC93B1Q9H1C4 597 aa19.09■□□□□ 0.65
PDLIM5-212ENST00000509333 TOMM22Q9NS69 142 aa19.09■□□□□ 0.65
PDLIM5-212ENST00000509333 CTNNA3Q9UI47 895 aa19.09■□□□□ 0.65
PDLIM5-212ENST00000509333 ERCC3P19447 782 aa19.08■□□□□ 0.64
PDLIM5-212ENST00000509333 STAT3P40763 770 aa19.08■□□□□ 0.64
PDLIM5-212ENST00000509333 TRIM32Q13049 653 aa19.08■□□□□ 0.64
PDLIM5-212ENST00000509333 SKAP1Q86WV1 359 aa19.08■□□□□ 0.64
PDLIM5-212ENST00000509333 RUFY2Q8WXA3 655 aa19.08■□□□□ 0.64
PDLIM5-212ENST00000509333 SOCS4Q8WXH5 440 aa19.08■□□□□ 0.64
PDLIM5-212ENST00000509333 SLF1Q9BQI6 1058 aa19.08■□□□□ 0.64
PDLIM5-212ENST00000509333 RNF41Q9H4P4 317 aaPredicted RBP19.08■□□□□ 0.64
PDLIM5-212ENST00000509333 MROH8Q9H579 483 aa19.08■□□□□ 0.64
PDLIM5-212ENST00000509333 FEM1BQ9UK73 627 aa19.08■□□□□ 0.64
PDLIM5-212ENST00000509333 STX8Q9UNK0 236 aa19.08■□□□□ 0.64
PDLIM5-212ENST00000509333 HOXC6P09630 235 aa19.07■□□□□ 0.64
PDLIM5-212ENST00000509333 BMP3P12645 472 aa19.07■□□□□ 0.64
PDLIM5-212ENST00000509333 MCCP23508 829 aa19.07■□□□□ 0.64
PDLIM5-212ENST00000509333 RGS2P41220 211 aa19.07■□□□□ 0.64
PDLIM5-212ENST00000509333 GRB14Q14449 540 aa19.07■□□□□ 0.64
PDLIM5-212ENST00000509333 PLS1Q14651 629 aa19.07■□□□□ 0.64
PDLIM5-212ENST00000509333 WDR78Q5VTH9 848 aa19.07■□□□□ 0.64
PDLIM5-212ENST00000509333 RCSD1Q6JBY9 416 aa19.07■□□□□ 0.64
PDLIM5-212ENST00000509333 TRIB2Q92519 343 aa19.07■□□□□ 0.64
PDLIM5-212ENST00000509333 TTC14Q96N46 770 aa19.07■□□□□ 0.64
PDLIM5-212ENST00000509333 SGPL1O95470 568 aa19.06■□□□□ 0.64
PDLIM5-212ENST00000509333 SLC25A27O95847 323 aa19.06■□□□□ 0.64
PDLIM5-212ENST00000509333 IGHA2P01877 340 aa19.06■□□□□ 0.64
PDLIM5-212ENST00000509333 HMGCRP04035 888 aa19.06■□□□□ 0.64
PDLIM5-212ENST00000509333 GJA8P48165 433 aa19.06■□□□□ 0.64
PDLIM5-212ENST00000509333 PTH1RQ03431 593 aa19.06■□□□□ 0.64
PDLIM5-212ENST00000509333 CCL14Q16627 93 aa19.06■□□□□ 0.64
PDLIM5-212ENST00000509333 RIOX2Q8IUF8 465 aa19.06■□□□□ 0.64
PDLIM5-212ENST00000509333 TRMT44Q8IYL2 757 aaKnown RBP19.06■□□□□ 0.64
PDLIM5-212ENST00000509333 GMCL1Q96IK5 515 aa19.06■□□□□ 0.64
PDLIM5-212ENST00000509333 TMEM47Q9BQJ4 181 aa19.06■□□□□ 0.64
PDLIM5-212ENST00000509333 CWC22Q9HCG8 908 aaKnown RBP19.06■□□□□ 0.64
PDLIM5-212ENST00000509333 ZNF214Q9UL59 606 aaPredicted RBP19.06■□□□□ 0.64
PDLIM5-212ENST00000509333 PLXNB2O15031 1838 aa19.05■□□□□ 0.64
PDLIM5-212ENST00000509333 SGSM2O43147 1006 aa19.05■□□□□ 0.64
PDLIM5-212ENST00000509333 PLA2G6O60733 806 aa19.05■□□□□ 0.64
PDLIM5-212ENST00000509333 IMMTQ16891 758 aaKnown RBP19.05■□□□□ 0.64
PDLIM5-212ENST00000509333 MAP3K21Q5TCX8 1036 aa19.05■□□□□ 0.64
PDLIM5-212ENST00000509333 NCAPG2Q86XI2 1143 aa19.05■□□□□ 0.64
PDLIM5-212ENST00000509333 NPLOC4Q8TAT6 608 aa19.05■□□□□ 0.64
PDLIM5-212ENST00000509333 PAK6Q9NQU5 681 aaPredicted RBP19.05■□□□□ 0.64
PDLIM5-212ENST00000509333 ZSWIM5Q9P217 1185 aa19.05■□□□□ 0.64
PDLIM5-212ENST00000509333 IVNS1ABPQ9Y6Y0 642 aa19.05■□□□□ 0.64
PDLIM5-212ENST00000509333 RPTORQ8N122 1335 aa19.04■□□□□ 0.64
PDLIM5-212ENST00000509333 RAD50Q92878 1312 aa19.04■□□□□ 0.64
PDLIM5-212ENST00000509333 TMEM232C9JQI7 657 aa19.04■□□□□ 0.64
PDLIM5-212ENST00000509333 ATP2A1O14983 1001 aa19.04■□□□□ 0.64
PDLIM5-212ENST00000509333 COBLO75128 1261 aa19.04■□□□□ 0.64
PDLIM5-212ENST00000509333 ZBED4O75132 1171 aa19.04■□□□□ 0.64
PDLIM5-212ENST00000509333 TOP1P11387 765 aaKnown RBP19.04■□□□□ 0.64
PDLIM5-212ENST00000509333 SLC1A4P43007 532 aa19.04■□□□□ 0.64
PDLIM5-212ENST00000509333 NT5C2P49902 561 aa19.04■□□□□ 0.64
PDLIM5-212ENST00000509333 ABRAQ8N0Z2 381 aa19.04■□□□□ 0.64
PDLIM5-212ENST00000509333 CHURC1Q8WUH1 139 aa19.04■□□□□ 0.64
PDLIM5-212ENST00000509333 ANKS1AQ92625 1134 aa19.04■□□□□ 0.64
PDLIM5-212ENST00000509333 ESR2Q92731 530 aa19.04■□□□□ 0.64
PDLIM5-212ENST00000509333 CHMP4CQ96CF2 233 aa19.04■□□□□ 0.64
PDLIM5-212ENST00000509333 CCDC136Q96JN2 1154 aa19.04■□□□□ 0.64
PDLIM5-212ENST00000509333 SLC38A10Q9HBR0 1119 aa19.04■□□□□ 0.64
PDLIM5-212ENST00000509333 FLRT1Q9NZU1 646 aa19.04■□□□□ 0.64
PDLIM5-212ENST00000509333 RIPK3Q9Y572 518 aa19.04■□□□□ 0.64
PDLIM5-212ENST00000509333 CACNB2Q08289 660 aaPredicted RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms