RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 TMX2Q9Y320 296 aa19.34■□□□□ 0.69
CXCL1-202ENST00000509101 TCRBV5S4A2TA0A5A2 114 aa19.33■□□□□ 0.68
CXCL1-202ENST00000509101 WDR46O15213 610 aaKnown RBP19.33■□□□□ 0.68
CXCL1-202ENST00000509101 RARBP10826 455 aa19.33■□□□□ 0.68
CXCL1-202ENST00000509101 FOSL2P15408 326 aa19.33■□□□□ 0.68
CXCL1-202ENST00000509101 ITGB8P26012 769 aa19.33■□□□□ 0.68
CXCL1-202ENST00000509101 TMEM132BQ14DG7 1078 aa19.33■□□□□ 0.68
CXCL1-202ENST00000509101 SIAH1Q8IUQ4 282 aa19.33■□□□□ 0.68
CXCL1-202ENST00000509101 RNPC3Q96LT9 517 aaKnown RBP19.33■□□□□ 0.68
CXCL1-202ENST00000509101 MMP19Q99542 508 aa19.33■□□□□ 0.68
CXCL1-202ENST00000509101 ARMT1Q9H993 441 aa19.33■□□□□ 0.68
CXCL1-202ENST00000509101 PGK1P00558 417 aa19.32■□□□□ 0.68
CXCL1-202ENST00000509101 PGK2P07205 417 aa19.32■□□□□ 0.68
CXCL1-202ENST00000509101 CLTBP09497 229 aa19.32■□□□□ 0.68
CXCL1-202ENST00000509101 RHPN1Q8TCX5 695 aa19.32■□□□□ 0.68
CXCL1-202ENST00000509101 ROBO3Q96MS0 1386 aa19.32■□□□□ 0.68
CXCL1-202ENST00000509101 GREB1LQ9C091 1923 aaPredicted RBP19.31■□□□□ 0.68
CXCL1-202ENST00000509101 A0A1W2PQ45 241 aaPredicted RBP19.31■□□□□ 0.68
CXCL1-202ENST00000509101 A0A1W2PQY0 241 aa19.31■□□□□ 0.68
CXCL1-202ENST00000509101 SMIM22K7EJ46 135 aa19.31■□□□□ 0.68
CXCL1-202ENST00000509101 APBB1O00213 710 aa19.31■□□□□ 0.68
CXCL1-202ENST00000509101 PRKAB2O43741 272 aa19.31■□□□□ 0.68
CXCL1-202ENST00000509101 PQBP1O60828 265 aaKnown RBP19.31■□□□□ 0.68
CXCL1-202ENST00000509101 SLC25A27O95847 323 aa19.31■□□□□ 0.68
CXCL1-202ENST00000509101 TAL1P17542 331 aaPredicted RBP19.31■□□□□ 0.68
CXCL1-202ENST00000509101 EPHB4P54760 987 aa19.31■□□□□ 0.68
CXCL1-202ENST00000509101 RNF180Q86T96 592 aa19.31■□□□□ 0.68
CXCL1-202ENST00000509101 LENG1Q96BZ8 264 aaPredicted RBP19.31■□□□□ 0.68
CXCL1-202ENST00000509101 BCL11AQ9H165 835 aa19.31■□□□□ 0.68
CXCL1-202ENST00000509101 FBXO28Q9NVF7 368 aa19.31■□□□□ 0.68
CXCL1-202ENST00000509101 TACC3Q9Y6A5 838 aa19.31■□□□□ 0.68
CXCL1-202ENST00000509101 TTC28Q96AY4 2481 aa19.31■□□□□ 0.68
CXCL1-202ENST00000509101 MCM3APO60318 1980 aa19.3■□□□□ 0.68
CXCL1-202ENST00000509101 CYP2D7A0A087X1C5 515 aa19.3■□□□□ 0.68
CXCL1-202ENST00000509101 MBD4O95243 580 aa19.3■□□□□ 0.68
CXCL1-202ENST00000509101 SLFNL1Q499Z3 407 aa19.3■□□□□ 0.68
CXCL1-202ENST00000509101 HSP90AB4PQ58FF6 505 aa19.3■□□□□ 0.68
CXCL1-202ENST00000509101 TINF2Q9BSI4 451 aa19.3■□□□□ 0.68
CXCL1-202ENST00000509101 NRBP1Q9UHY1 535 aa19.3■□□□□ 0.68
CXCL1-202ENST00000509101 RAG1P15918 1043 aa19.29■□□□□ 0.68
CXCL1-202ENST00000509101 CDK8P49336 464 aa19.29■□□□□ 0.68
CXCL1-202ENST00000509101 KCTD2Q14681 263 aa19.29■□□□□ 0.68
CXCL1-202ENST00000509101 RIOX2Q8IUF8 465 aa19.29■□□□□ 0.68
CXCL1-202ENST00000509101 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.29■□□□□ 0.68
CXCL1-202ENST00000509101 MYH4Q9Y623 1939 aa19.29■□□□□ 0.68
CXCL1-202ENST00000509101 KIAA0355O15063 1070 aa19.28■□□□□ 0.68
CXCL1-202ENST00000509101 RAD21O60216 631 aa19.28■□□□□ 0.68
CXCL1-202ENST00000509101 EEF2P13639 858 aaKnown RBP19.28■□□□□ 0.68
CXCL1-202ENST00000509101 AKR1A1P14550 325 aa19.28■□□□□ 0.68
CXCL1-202ENST00000509101 FPGSQ05932 587 aa19.28■□□□□ 0.68
CXCL1-202ENST00000509101 ZNF792Q3KQV3 632 aa19.28■□□□□ 0.68
CXCL1-202ENST00000509101 CLASRPQ8N2M8 674 aaKnown RBP19.28■□□□□ 0.68
CXCL1-202ENST00000509101 CCDC17Q96LX7 622 aa19.28■□□□□ 0.68
CXCL1-202ENST00000509101 ATP8A2Q9NTI2 1148 aa19.28■□□□□ 0.68
CXCL1-202ENST00000509101 ADAMTS5Q9UNA0 930 aa19.28■□□□□ 0.68
CXCL1-202ENST00000509101 TMEM265A0A087WTH1 108 aa19.27■□□□□ 0.68
CXCL1-202ENST00000509101 IFIT2P09913 472 aaKnown RBP19.27■□□□□ 0.68
CXCL1-202ENST00000509101 ZNF865P0CJ78 1059 aaPredicted RBP19.27■□□□□ 0.68
CXCL1-202ENST00000509101 ADD2P35612 726 aa19.27■□□□□ 0.68
CXCL1-202ENST00000509101 C12orf60Q5U649 245 aa19.27■□□□□ 0.68
CXCL1-202ENST00000509101 AMOTL1Q8IY63 956 aa19.27■□□□□ 0.68
CXCL1-202ENST00000509101 PANK1Q8TE04 598 aa19.27■□□□□ 0.68
CXCL1-202ENST00000509101 TMEM39AQ9NV64 488 aa19.27■□□□□ 0.68
CXCL1-202ENST00000509101 PAG1Q9NWQ8 432 aa19.27■□□□□ 0.68
CXCL1-202ENST00000509101 ZNF214Q9UL59 606 aaPredicted RBP19.27■□□□□ 0.68
CXCL1-202ENST00000509101 PPP1R9AQ9ULJ8 1098 aa19.27■□□□□ 0.68
CXCL1-202ENST00000509101 DIS3Q9Y2L1 958 aaKnown RBP19.27■□□□□ 0.68
CXCL1-202ENST00000509101 SYNRGQ9UMZ2 1314 aa19.26■□□□□ 0.67
CXCL1-202ENST00000509101 VWA5AO00534 786 aa19.26■□□□□ 0.67
CXCL1-202ENST00000509101 ADAMTS4O75173 837 aa19.26■□□□□ 0.67
CXCL1-202ENST00000509101 STAT3P40763 770 aa19.26■□□□□ 0.67
CXCL1-202ENST00000509101 FAM83BQ5T0W9 1011 aa19.26■□□□□ 0.67
CXCL1-202ENST00000509101 C16orf86Q6ZW13 317 aa19.26■□□□□ 0.67
CXCL1-202ENST00000509101 KIF1BPQ96EK5 621 aa19.26■□□□□ 0.67
CXCL1-202ENST00000509101 GOPCQ9HD26 462 aa19.26■□□□□ 0.67
CXCL1-202ENST00000509101 CNPY2Q9Y2B0 182 aa19.26■□□□□ 0.67
CXCL1-202ENST00000509101 USP17L12C9JPN9 530 aa19.25■□□□□ 0.67
CXCL1-202ENST00000509101 USP17L21D6R901 530 aa19.25■□□□□ 0.67
CXCL1-202ENST00000509101 CHGBP05060 677 aa19.25■□□□□ 0.67
CXCL1-202ENST00000509101 DNAJB2P25686 324 aa19.25■□□□□ 0.67
CXCL1-202ENST00000509101 FAAP100Q0VG06 881 aa19.25■□□□□ 0.67
CXCL1-202ENST00000509101 REPS2Q8NFH8 660 aa19.25■□□□□ 0.67
CXCL1-202ENST00000509101 BOLA2Q9H3K6 86 aa19.25■□□□□ 0.67
CXCL1-202ENST00000509101 STARD7Q9NQZ5 370 aa19.25■□□□□ 0.67
CXCL1-202ENST00000509101 GBF1Q92538 1859 aa19.24■□□□□ 0.67
CXCL1-202ENST00000509101 COPB2P35606 906 aa19.24■□□□□ 0.67
CXCL1-202ENST00000509101 ACLYP53396 1101 aa19.24■□□□□ 0.67
CXCL1-202ENST00000509101 GRIN2CQ14957 1233 aa19.24■□□□□ 0.67
CXCL1-202ENST00000509101 USP38Q8NB14 1042 aa19.24■□□□□ 0.67
CXCL1-202ENST00000509101 DDRGK1Q96HY6 314 aa19.24■□□□□ 0.67
CXCL1-202ENST00000509101 KANSL2Q9H9L4 492 aa19.24■□□□□ 0.67
CXCL1-202ENST00000509101 PRDM6Q9NQX0 595 aa19.24■□□□□ 0.67
CXCL1-202ENST00000509101 ZHX1Q9UKY1 873 aaPredicted RBP19.24■□□□□ 0.67
CXCL1-202ENST00000509101 DCDC2CA8MYV0 355 aa19.23■□□□□ 0.67
CXCL1-202ENST00000509101 ANKRD33Q7Z3H0 272 aa19.23■□□□□ 0.67
CXCL1-202ENST00000509101 NUP88Q99567 741 aaPredicted RBP19.23■□□□□ 0.67
CXCL1-202ENST00000509101 TSEN34Q9BSV6 310 aaKnown RBP19.23■□□□□ 0.67
CXCL1-202ENST00000509101 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.23■□□□□ 0.67
CXCL1-202ENST00000509101 SLC4A4Q9Y6R1 1079 aa19.23■□□□□ 0.67
CXCL1-202ENST00000509101 MUC3AQ02505 3323 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms