RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 POSTNQ15063 836 aa10.54□□□□□ -0.72
HTT-205ENST00000509043 LONRF3Q496Y0 759 aa10.54□□□□□ -0.72
HTT-205ENST00000509043 GPATCH4Q5T3I0 446 aaKnown RBP10.54□□□□□ -0.72
HTT-205ENST00000509043 PPP1R18Q6NYC8 613 aa10.54□□□□□ -0.72
HTT-205ENST00000509043 KRT25Q7Z3Z0 450 aa10.54□□□□□ -0.72
HTT-205ENST00000509043 DRC7Q8IY82 874 aa10.54□□□□□ -0.72
HTT-205ENST00000509043 AOPEPQ8N6M6 819 aa10.54□□□□□ -0.72
HTT-205ENST00000509043 SPATA20Q8TB22 786 aa10.54□□□□□ -0.72
HTT-205ENST00000509043 FBXW7Q969H0 707 aa10.54□□□□□ -0.72
HTT-205ENST00000509043 SHISA4Q96DD7 197 aa10.54□□□□□ -0.72
HTT-205ENST00000509043 CAMKK2Q96RR4 588 aa10.54□□□□□ -0.72
HTT-205ENST00000509043 ZMYND12Q9H0C1 365 aa10.54□□□□□ -0.72
HTT-205ENST00000509043 CSRNP2Q9H175 543 aa10.54□□□□□ -0.72
HTT-205ENST00000509043 C6orf50Q9HD87 102 aa10.54□□□□□ -0.72
HTT-205ENST00000509043 MTMR4Q9NYA4 1195 aa10.54□□□□□ -0.72
HTT-205ENST00000509043 CLIP2Q9UDT6 1046 aa10.54□□□□□ -0.72
HTT-205ENST00000509043 SYNPO2Q9UMS6 1093 aa10.54□□□□□ -0.72
HTT-205ENST00000509043 STXBP3O00186 592 aa10.53□□□□□ -0.72
HTT-205ENST00000509043 POLR2DO15514 142 aaKnown RBP10.53□□□□□ -0.72
HTT-205ENST00000509043 MYL1P05976 194 aa10.53□□□□□ -0.72
HTT-205ENST00000509043 SNHG28P0DPA3 235 aa10.53□□□□□ -0.72
HTT-205ENST00000509043 CRKP46108 304 aa10.53□□□□□ -0.72
HTT-205ENST00000509043 SARSP49591 514 aaKnown RBP10.53□□□□□ -0.72
HTT-205ENST00000509043 MYL5Q02045 173 aa10.53□□□□□ -0.72
HTT-205ENST00000509043 DPCR1Q3MIW9 517 aa10.53□□□□□ -0.72
HTT-205ENST00000509043 DACT2Q5SW24 774 aa10.53□□□□□ -0.72
HTT-205ENST00000509043 SOGA3Q5TF21 947 aa10.53□□□□□ -0.72
HTT-205ENST00000509043 APOBEC3HQ6NTF7 200 aaKnown RBP10.53□□□□□ -0.72
HTT-205ENST00000509043 CDC42EP5Q6NZY7 148 aa10.53□□□□□ -0.72
HTT-205ENST00000509043 SLC51AQ86UW1 340 aa10.53□□□□□ -0.72
HTT-205ENST00000509043 METTL16Q86W50 562 aaKnown RBP10.53□□□□□ -0.72
HTT-205ENST00000509043 TEX2Q8IWB9 1127 aa10.53□□□□□ -0.72
HTT-205ENST00000509043 IQUBQ8NA54 791 aa10.53□□□□□ -0.72
HTT-205ENST00000509043 SLC44A5Q8NCS7 719 aa10.53□□□□□ -0.72
HTT-205ENST00000509043 SLC16A10Q8TF71 515 aa10.53□□□□□ -0.72
HTT-205ENST00000509043 C7orf43Q8WVR3 580 aa10.53□□□□□ -0.72
HTT-205ENST00000509043 SMARCE1Q969G3 411 aa10.53□□□□□ -0.72
HTT-205ENST00000509043 CEP95Q96GE4 821 aa10.53□□□□□ -0.72
HTT-205ENST00000509043 GTPBP4Q9BZE4 634 aaKnown RBP10.53□□□□□ -0.72
HTT-205ENST00000509043 GLT8D2Q9H1C3 349 aa10.53□□□□□ -0.72
HTT-205ENST00000509043 RIOX1Q9H6W3 641 aa10.53□□□□□ -0.72
HTT-205ENST00000509043 SPTLC3Q9NUV7 552 aa10.53□□□□□ -0.72
HTT-205ENST00000509043 ACTN4O43707 911 aaKnown RBP10.52□□□□□ -0.73
HTT-205ENST00000509043 NRDCO43847 1150 aa10.52□□□□□ -0.73
HTT-205ENST00000509043 ECE2O60344 883 aa10.52□□□□□ -0.73
HTT-205ENST00000509043 ENTPD3O75355 529 aa10.52□□□□□ -0.73
HTT-205ENST00000509043 ERCC5P28715 1186 aaPredicted RBP10.52□□□□□ -0.73
HTT-205ENST00000509043 PTGDRQ13258 359 aa10.52□□□□□ -0.73
HTT-205ENST00000509043 DOK7Q18PE1 504 aa10.52□□□□□ -0.73
HTT-205ENST00000509043 WWC2Q6AWC2 1192 aa10.52□□□□□ -0.73
HTT-205ENST00000509043 PIK3AP1Q6ZUJ8 805 aa10.52□□□□□ -0.73
HTT-205ENST00000509043 SH3RF1Q7Z6J0 888 aa10.52□□□□□ -0.73
HTT-205ENST00000509043 FOXP4Q8IVH2 680 aaPredicted RBP10.52□□□□□ -0.73
HTT-205ENST00000509043 RTKN2Q8IZC4 609 aa10.52□□□□□ -0.73
HTT-205ENST00000509043 STAG2Q8N3U4 1231 aa10.52□□□□□ -0.73
HTT-205ENST00000509043 AK8Q96MA6 479 aa10.52□□□□□ -0.73
HTT-205ENST00000509043 GSDMAQ96QA5 445 aa10.52□□□□□ -0.73
HTT-205ENST00000509043 MAGEF1Q9HAY2 307 aa10.52□□□□□ -0.73
HTT-205ENST00000509043 PI4KBQ9UBF8 816 aa10.52□□□□□ -0.73
HTT-205ENST00000509043 PCDHA5Q9Y5H7 936 aa10.52□□□□□ -0.73
HTT-205ENST00000509043 hCG_1642624A0A1W2PR95 340 aa10.51□□□□□ -0.73
HTT-205ENST00000509043 CYTH3O43739 400 aa10.51□□□□□ -0.73
HTT-205ENST00000509043 PDHBP11177 359 aa10.51□□□□□ -0.73
HTT-205ENST00000509043 ATP2B1P20020 1258 aa10.51□□□□□ -0.73
HTT-205ENST00000509043 HOXA7P31268 230 aaPredicted RBP10.51□□□□□ -0.73
HTT-205ENST00000509043 MMP14P50281 582 aa10.51□□□□□ -0.73
HTT-205ENST00000509043 NAPAP54920 295 aa10.51□□□□□ -0.73
HTT-205ENST00000509043 PICALMQ13492 652 aa10.51□□□□□ -0.73
HTT-205ENST00000509043 PNOCQ13519 176 aa10.51□□□□□ -0.73
HTT-205ENST00000509043 MORC3Q14149 939 aa10.51□□□□□ -0.73
HTT-205ENST00000509043 NONOQ15233 471 aaKnown RBP eCLIP10.51□□□□□ -0.73
HTT-205ENST00000509043 ZNF174Q15697 407 aa10.51□□□□□ -0.73
HTT-205ENST00000509043 EARS2Q5JPH6 523 aaKnown RBP10.51□□□□□ -0.73
HTT-205ENST00000509043 MCTP2Q6DN12 878 aa10.51□□□□□ -0.73
HTT-205ENST00000509043 HEATR3Q7Z4Q2 680 aa10.51□□□□□ -0.73
HTT-205ENST00000509043 KIAA1524Q8TCG1 905 aa10.51□□□□□ -0.73
HTT-205ENST00000509043 SYMPKQ92797 1274 aaKnown RBP10.51□□□□□ -0.73
HTT-205ENST00000509043 MKL1Q969V6 931 aa10.51□□□□□ -0.73
HTT-205ENST00000509043 PSMD1Q99460 953 aa10.51□□□□□ -0.73
HTT-205ENST00000509043 NAP1L4Q99733 375 aaKnown RBP10.51□□□□□ -0.73
HTT-205ENST00000509043 CUEDC2Q9H467 287 aa10.51□□□□□ -0.73
HTT-205ENST00000509043 RMND1Q9NWS8 449 aa10.51□□□□□ -0.73
HTT-205ENST00000509043 SERTAD1Q9UHV2 236 aa10.51□□□□□ -0.73
HTT-205ENST00000509043 PCDHA6Q9UN73 950 aa10.51□□□□□ -0.73
HTT-205ENST00000509043 PCDHA8Q9Y5H6 950 aa10.51□□□□□ -0.73
HTT-205ENST00000509043 ATRNL1Q5VV63 1379 aa10.51□□□□□ -0.73
HTT-205ENST00000509043 F8W031 263 aaPredicted RBP10.5□□□□□ -0.73
HTT-205ENST00000509043 SHMT1P34896 483 aa10.5□□□□□ -0.73
HTT-205ENST00000509043 BAG6P46379 1132 aa10.5□□□□□ -0.73
HTT-205ENST00000509043 SF3B2Q13435 895 aaKnown RBP10.5□□□□□ -0.73
HTT-205ENST00000509043 NOLC1Q14978 699 aaKnown RBP eCLIP10.5□□□□□ -0.73
HTT-205ENST00000509043 NCAPHQ15003 741 aa10.5□□□□□ -0.73
HTT-205ENST00000509043 SLC4A8Q2Y0W8 1093 aa10.5□□□□□ -0.73
HTT-205ENST00000509043 CCDC93Q567U6 631 aa10.5□□□□□ -0.73
HTT-205ENST00000509043 MSL1Q68DK7 614 aa10.5□□□□□ -0.73
HTT-205ENST00000509043 DTHD1Q6ZMT9 781 aa10.5□□□□□ -0.73
HTT-205ENST00000509043 CCDC186Q7Z3E2 898 aa10.5□□□□□ -0.73
HTT-205ENST00000509043 SPC24Q8NBT2 197 aa10.5□□□□□ -0.73
HTT-205ENST00000509043 CCDC150Q8NCX0 1101 aa10.5□□□□□ -0.73
HTT-205ENST00000509043 ENOX1Q8TC92 643 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms