RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 UBE2Q1Q7Z7E8 422 aa10.31□□□□□ -0.76
SNCA-211ENST00000508895 NEDD1Q8NHV4 660 aa10.31□□□□□ -0.76
SNCA-211ENST00000508895 COA7Q96BR5 231 aa10.31□□□□□ -0.76
SNCA-211ENST00000508895 NAPBQ9H115 298 aa10.31□□□□□ -0.76
SNCA-211ENST00000508895 KANSL2Q9H9L4 492 aa10.31□□□□□ -0.76
SNCA-211ENST00000508895 MKNK2Q9HBH9 465 aa10.31□□□□□ -0.76
SNCA-211ENST00000508895 DIAPH3Q9NSV4 1193 aa10.31□□□□□ -0.76
SNCA-211ENST00000508895 MTMR4Q9NYA4 1195 aa10.31□□□□□ -0.76
SNCA-211ENST00000508895 NYAP2Q9P242 653 aa10.31□□□□□ -0.76
SNCA-211ENST00000508895 LCTP09848 1927 aa10.31□□□□□ -0.76
SNCA-211ENST00000508895 RAD50Q92878 1312 aa10.31□□□□□ -0.76
SNCA-211ENST00000508895 PLIN4Q96Q06 1357 aa10.3□□□□□ -0.76
SNCA-211ENST00000508895 TRIOBPQ9H2D6 2365 aa10.3□□□□□ -0.76
SNCA-211ENST00000508895 COBLO75128 1261 aa10.3□□□□□ -0.76
SNCA-211ENST00000508895 FLOT1O75955 427 aa10.3□□□□□ -0.76
SNCA-211ENST00000508895 FGRP09769 529 aa10.3□□□□□ -0.76
SNCA-211ENST00000508895 CHMLP26374 656 aa10.3□□□□□ -0.76
SNCA-211ENST00000508895 TFAP4Q01664 338 aa10.3□□□□□ -0.76
SNCA-211ENST00000508895 COL9A3Q14050 684 aaPredicted RBP10.3□□□□□ -0.76
SNCA-211ENST00000508895 ARHGEF6Q15052 776 aa10.3□□□□□ -0.76
SNCA-211ENST00000508895 ALX1Q15699 326 aa10.3□□□□□ -0.76
SNCA-211ENST00000508895 CWC27Q6UX04 472 aaKnown RBP10.3□□□□□ -0.76
SNCA-211ENST00000508895 PLEKHH3Q7Z736 793 aa10.3□□□□□ -0.76
SNCA-211ENST00000508895 PIAS4Q8N2W9 510 aaPredicted RBP10.3□□□□□ -0.76
SNCA-211ENST00000508895 SLAIN1Q8ND83 568 aa10.3□□□□□ -0.76
SNCA-211ENST00000508895 TRPV1Q8NER1 839 aa10.3□□□□□ -0.76
SNCA-211ENST00000508895 DIS3LQ8TF46 1054 aaKnown RBP10.3□□□□□ -0.76
SNCA-211ENST00000508895 DDRGK1Q96HY6 314 aa10.3□□□□□ -0.76
SNCA-211ENST00000508895 RNF208Q9H0X6 261 aa10.3□□□□□ -0.76
SNCA-211ENST00000508895 ARHGEF10LQ9HCE6 1279 aa10.3□□□□□ -0.76
SNCA-211ENST00000508895 BIN2Q9UBW5 565 aaPredicted RBP10.3□□□□□ -0.76
SNCA-211ENST00000508895 ANAPC4Q9UJX5 808 aa10.3□□□□□ -0.76
SNCA-211ENST00000508895 ADAMTS5Q9UNA0 930 aa10.3□□□□□ -0.76
SNCA-211ENST00000508895 TAF6LQ9Y6J9 622 aa10.3□□□□□ -0.76
SNCA-211ENST00000508895 ZMYM6O95789 1325 aa10.3□□□□□ -0.76
SNCA-211ENST00000508895 ZNF236Q9UL36 1845 aa10.29□□□□□ -0.76
SNCA-211ENST00000508895 F5H6K3 240 aa10.29□□□□□ -0.76
SNCA-211ENST00000508895 HIP1O00291 1037 aa10.29□□□□□ -0.76
SNCA-211ENST00000508895 WDR46O15213 610 aaKnown RBP10.29□□□□□ -0.76
SNCA-211ENST00000508895 RAD21O60216 631 aa10.29□□□□□ -0.76
SNCA-211ENST00000508895 GJB1P08034 283 aa10.29□□□□□ -0.76
SNCA-211ENST00000508895 ERCC3P19447 782 aa10.29□□□□□ -0.76
SNCA-211ENST00000508895 PTPREP23469 700 aa10.29□□□□□ -0.76
SNCA-211ENST00000508895 CCND3P30281 292 aaPredicted RBP10.29□□□□□ -0.76
SNCA-211ENST00000508895 GJA8P48165 433 aa10.29□□□□□ -0.76
SNCA-211ENST00000508895 SNAP25P60880 206 aa10.29□□□□□ -0.76
SNCA-211ENST00000508895 KLRC3Q07444 240 aa10.29□□□□□ -0.76
SNCA-211ENST00000508895 CACNB2Q08289 660 aaPredicted RBP10.29□□□□□ -0.76
SNCA-211ENST00000508895 MAP3K21Q5TCX8 1036 aa10.29□□□□□ -0.76
SNCA-211ENST00000508895 NBPF11Q86T75 865 aa10.29□□□□□ -0.76
SNCA-211ENST00000508895 AMOTL1Q8IY63 956 aa10.29□□□□□ -0.76
SNCA-211ENST00000508895 PXYLP1Q8TE99 480 aa10.29□□□□□ -0.76
SNCA-211ENST00000508895 MKL1Q969V6 931 aa10.29□□□□□ -0.76
SNCA-211ENST00000508895 SPATC1LQ9H0A9 340 aa10.29□□□□□ -0.76
SNCA-211ENST00000508895 PAK6Q9NQU5 681 aaPredicted RBP10.29□□□□□ -0.76
SNCA-211ENST00000508895 RIPK3Q9Y572 518 aa10.29□□□□□ -0.76
SNCA-211ENST00000508895 NEDD4P46934 1319 aa10.29□□□□□ -0.76
SNCA-211ENST00000508895 UNC80Q8N2C7 3258 aa10.28□□□□□ -0.76
SNCA-211ENST00000508895 VWA5AO00534 786 aa10.28□□□□□ -0.76
SNCA-211ENST00000508895 MAPK4P31152 587 aa10.28□□□□□ -0.76
SNCA-211ENST00000508895 NOVP48745 357 aa10.28□□□□□ -0.76
SNCA-211ENST00000508895 MAP2K5Q13163 448 aa10.28□□□□□ -0.76
SNCA-211ENST00000508895 GRB14Q14449 540 aa10.28□□□□□ -0.76
SNCA-211ENST00000508895 WDR78Q5VTH9 848 aa10.28□□□□□ -0.76
SNCA-211ENST00000508895 RCSD1Q6JBY9 416 aa10.28□□□□□ -0.76
SNCA-211ENST00000508895 ZNF444Q8N0Y2 327 aaPredicted RBP10.28□□□□□ -0.76
SNCA-211ENST00000508895 SLC17A8Q8NDX2 589 aa10.28□□□□□ -0.76
SNCA-211ENST00000508895 U2AF1L4Q8WU68 220 aaKnown RBP10.28□□□□□ -0.76
SNCA-211ENST00000508895 LPAR1Q92633 364 aa10.28□□□□□ -0.76
SNCA-211ENST00000508895 DEFB118Q96PH6 123 aa10.28□□□□□ -0.76
SNCA-211ENST00000508895 NUDT12Q9BQG2 462 aa10.28□□□□□ -0.76
SNCA-211ENST00000508895 TMEM106CQ9BVX2 250 aa10.28□□□□□ -0.76
SNCA-211ENST00000508895 NACAP1Q9BZK3 213 aa10.28□□□□□ -0.76
SNCA-211ENST00000508895 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.28□□□□□ -0.76
SNCA-211ENST00000508895 ZNF214Q9UL59 606 aaPredicted RBP10.28□□□□□ -0.76
SNCA-211ENST00000508895 PPP1R9AQ9ULJ8 1098 aa10.28□□□□□ -0.76
SNCA-211ENST00000508895 GTF3C3Q9Y5Q9 886 aa10.28□□□□□ -0.76
SNCA-211ENST00000508895 SGSM2O43147 1006 aa10.27□□□□□ -0.77
SNCA-211ENST00000508895 ORC4O43929 436 aa10.27□□□□□ -0.77
SNCA-211ENST00000508895 SGPL1O95470 568 aa10.27□□□□□ -0.77
SNCA-211ENST00000508895 HMGCRP04035 888 aa10.27□□□□□ -0.77
SNCA-211ENST00000508895 CYP2C19P33261 490 aa10.27□□□□□ -0.77
SNCA-211ENST00000508895 PTH1RQ03431 593 aa10.27□□□□□ -0.77
SNCA-211ENST00000508895 PLS1Q14651 629 aa10.27□□□□□ -0.77
SNCA-211ENST00000508895 PRAMEF19Q5SWL8 479 aa10.27□□□□□ -0.77
SNCA-211ENST00000508895 TTBK2Q6IQ55 1244 aa10.27□□□□□ -0.77
SNCA-211ENST00000508895 CRISPLD2Q9H0B8 497 aa10.27□□□□□ -0.77
SNCA-211ENST00000508895 HOXC10Q9NYD6 342 aa10.27□□□□□ -0.77
SNCA-211ENST00000508895 DDX49Q9Y6V7 483 aaKnown RBP10.27□□□□□ -0.77
SNCA-211ENST00000508895 SLC15A5A6NIM6 579 aa10.26□□□□□ -0.77
SNCA-211ENST00000508895 RANBP6O60518 1105 aaKnown RBP10.26□□□□□ -0.77
SNCA-211ENST00000508895 CDC45O75419 566 aa10.26□□□□□ -0.77
SNCA-211ENST00000508895 TTLL1O95922 423 aa10.26□□□□□ -0.77
SNCA-211ENST00000508895 PGK2P07205 417 aa10.26□□□□□ -0.77
SNCA-211ENST00000508895 TSPY3P0CV98 308 aa10.26□□□□□ -0.77
SNCA-211ENST00000508895 TSPY8P0CW00 308 aa10.26□□□□□ -0.77
SNCA-211ENST00000508895 XRCC5P13010 732 aaKnown RBP10.26□□□□□ -0.77
SNCA-211ENST00000508895 PRKAR2AP13861 404 aaKnown RBP10.26□□□□□ -0.77
SNCA-211ENST00000508895 MCCP23508 829 aa10.26□□□□□ -0.77
SNCA-211ENST00000508895 ADORA2AP29274 412 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms