RNA–Protein interactions for RNA: ENST00000508715.5

PTPN20-220, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-220ENST00000508715 CNMDO75829 334 aa12.14□□□□□ -0.47
PTPN20-220ENST00000508715 LIFRP42702 1097 aa12.14□□□□□ -0.47
PTPN20-220ENST00000508715 TROAPQ12815 778 aa12.14□□□□□ -0.47
PTPN20-220ENST00000508715 TOB2Q14106 344 aaPredicted RBP12.14□□□□□ -0.47
PTPN20-220ENST00000508715 WTAPQ15007 396 aa12.14□□□□□ -0.47
PTPN20-220ENST00000508715 CCDC178Q5BJE1 867 aa12.14□□□□□ -0.47
PTPN20-220ENST00000508715 IFIT1BQ5T764 474 aaKnown RBP12.14□□□□□ -0.47
PTPN20-220ENST00000508715 TTBK2Q6IQ55 1244 aa12.14□□□□□ -0.47
PTPN20-220ENST00000508715 BLOC1S2Q6QNY1 142 aa12.14□□□□□ -0.47
PTPN20-220ENST00000508715 RUFY3Q7L099 469 aa12.14□□□□□ -0.47
PTPN20-220ENST00000508715 FBXL16Q8N461 479 aa12.14□□□□□ -0.47
PTPN20-220ENST00000508715 TMEM87BQ96K49 555 aa12.14□□□□□ -0.47
PTPN20-220ENST00000508715 SH2D4AQ9H788 454 aa12.14□□□□□ -0.47
PTPN20-220ENST00000508715 GOPCQ9HD26 462 aa12.14□□□□□ -0.47
PTPN20-220ENST00000508715 TXNRD2Q9NNW7 524 aa12.14□□□□□ -0.47
PTPN20-220ENST00000508715 PLXNB2O15031 1838 aa12.14□□□□□ -0.47
PTPN20-220ENST00000508715 SPDYE16A6NNV3 312 aaPredicted RBP12.13□□□□□ -0.47
PTPN20-220ENST00000508715 USP17L15C9J2P7 530 aa12.13□□□□□ -0.47
PTPN20-220ENST00000508715 USP17L13C9JLJ4 530 aa12.13□□□□□ -0.47
PTPN20-220ENST00000508715 USP17L11C9JVI0 530 aa12.13□□□□□ -0.47
PTPN20-220ENST00000508715 USP17L18D6R9N7 530 aa12.13□□□□□ -0.47
PTPN20-220ENST00000508715 USP17L22D6RA61 530 aa12.13□□□□□ -0.47
PTPN20-220ENST00000508715 USP17L17D6RBQ6 530 aa12.13□□□□□ -0.47
PTPN20-220ENST00000508715 USP17L19D6RCP7 530 aa12.13□□□□□ -0.47
PTPN20-220ENST00000508715 USP17L20D6RJB6 530 aa12.13□□□□□ -0.47
PTPN20-220ENST00000508715 BCRP11274 1271 aa12.13□□□□□ -0.47
PTPN20-220ENST00000508715 MAP2K1Q02750 393 aaPredicted RBP12.13□□□□□ -0.47
PTPN20-220ENST00000508715 USP17L24Q0WX57 530 aa12.13□□□□□ -0.47
PTPN20-220ENST00000508715 TAF1CQ15572 869 aaPredicted RBP12.13□□□□□ -0.47
PTPN20-220ENST00000508715 Q6ZUG5 572 aa12.13□□□□□ -0.47
PTPN20-220ENST00000508715 KCTD1Q719H9 257 aa12.13□□□□□ -0.47
PTPN20-220ENST00000508715 SGMS1Q86VZ5 419 aa12.13□□□□□ -0.47
PTPN20-220ENST00000508715 RAB11FIP4Q86YS3 637 aa12.13□□□□□ -0.47
PTPN20-220ENST00000508715 STAG2Q8N3U4 1231 aa12.13□□□□□ -0.47
PTPN20-220ENST00000508715 GMCL1Q96IK5 515 aa12.13□□□□□ -0.47
PTPN20-220ENST00000508715 TBC1D32Q96NH3 1257 aa12.13□□□□□ -0.47
PTPN20-220ENST00000508715 MYL10Q9BUA6 226 aa12.13□□□□□ -0.47
PTPN20-220ENST00000508715 CPVLQ9H3G5 476 aa12.13□□□□□ -0.47
PTPN20-220ENST00000508715 RBPJLQ9UBG7 517 aa12.13□□□□□ -0.47
PTPN20-220ENST00000508715 ADAMTS5Q9UNA0 930 aa12.13□□□□□ -0.47
PTPN20-220ENST00000508715 MTMR7Q9Y216 660 aa12.13□□□□□ -0.47
PTPN20-220ENST00000508715 FRMPD2Q68DX3 1309 aaPredicted RBP12.12□□□□□ -0.47
PTPN20-220ENST00000508715 FOXN1O15353 648 aa12.12□□□□□ -0.47
PTPN20-220ENST00000508715 RAD21O60216 631 aa12.12□□□□□ -0.47
PTPN20-220ENST00000508715 TLR2O60603 784 aa12.12□□□□□ -0.47
PTPN20-220ENST00000508715 HMGB1P09429 215 aaKnown RBP12.12□□□□□ -0.47
PTPN20-220ENST00000508715 GOLGA8HP0CJ92 632 aa12.12□□□□□ -0.47
PTPN20-220ENST00000508715 BMP3P12645 472 aa12.12□□□□□ -0.47
PTPN20-220ENST00000508715 PSMA5P28066 241 aa12.12□□□□□ -0.47
PTPN20-220ENST00000508715 DSG3P32926 999 aa12.12□□□□□ -0.47
PTPN20-220ENST00000508715 HERVK_113P62684 666 aa12.12□□□□□ -0.47
PTPN20-220ENST00000508715 ZNF543Q08ER8 600 aa12.12□□□□□ -0.47
PTPN20-220ENST00000508715 PPP4R3BQ5MIZ7 849 aa12.12□□□□□ -0.47
PTPN20-220ENST00000508715 C17orf99Q6UX52 265 aa12.12□□□□□ -0.47
PTPN20-220ENST00000508715 LBX2Q6XYB7 198 aa12.12□□□□□ -0.47
PTPN20-220ENST00000508715 NBPF11Q86T75 865 aa12.12□□□□□ -0.47
PTPN20-220ENST00000508715 ZNF654Q8IZM8 581 aa12.12□□□□□ -0.47
PTPN20-220ENST00000508715 REPS2Q8NFH8 660 aa12.12□□□□□ -0.47
PTPN20-220ENST00000508715 DCAF4Q8WV16 495 aa12.12□□□□□ -0.47
PTPN20-220ENST00000508715 ATG4CQ96DT6 458 aa12.12□□□□□ -0.47
PTPN20-220ENST00000508715 LARP6Q9BRS8 491 aaKnown RBP12.12□□□□□ -0.47
PTPN20-220ENST00000508715 KAT14Q9H8E8 782 aa12.12□□□□□ -0.47
PTPN20-220ENST00000508715 FAM217BQ9NTX9 383 aaPredicted RBP12.12□□□□□ -0.47
PTPN20-220ENST00000508715 SAGE1Q9NXZ1 904 aa12.12□□□□□ -0.47
PTPN20-220ENST00000508715 BTBD7Q9P203 1132 aa12.12□□□□□ -0.47
PTPN20-220ENST00000508715 MAD2L2Q9UI95 211 aa12.12□□□□□ -0.47
PTPN20-220ENST00000508715 HPS5Q9UPZ3 1129 aa12.12□□□□□ -0.47
PTPN20-220ENST00000508715 PALM3A6NDB9 673 aaPredicted RBP12.11□□□□□ -0.47
PTPN20-220ENST00000508715 TMEM232C9JQI7 657 aa12.11□□□□□ -0.47
PTPN20-220ENST00000508715 EIF5BO60841 1220 aaKnown RBP12.11□□□□□ -0.47
PTPN20-220ENST00000508715 ALDH1A1P00352 501 aa12.11□□□□□ -0.47
PTPN20-220ENST00000508715 HSPA1AP0DMV8 641 aaKnown RBP12.11□□□□□ -0.47
PTPN20-220ENST00000508715 HSPA1BP0DMV9 641 aaKnown RBP12.11□□□□□ -0.47
PTPN20-220ENST00000508715 RXRAP19793 462 aa12.11□□□□□ -0.47
PTPN20-220ENST00000508715 CTGFP29279 349 aa12.11□□□□□ -0.47
PTPN20-220ENST00000508715 SLC1A4P43007 532 aa12.11□□□□□ -0.47
PTPN20-220ENST00000508715 EVCP57679 992 aa12.11□□□□□ -0.47
PTPN20-220ENST00000508715 APOBRQ0VD83 1088 aa12.11□□□□□ -0.47
PTPN20-220ENST00000508715 COG2Q14746 738 aa12.11□□□□□ -0.47
PTPN20-220ENST00000508715 GRM4Q14833 912 aa12.11□□□□□ -0.47
PTPN20-220ENST00000508715 Q3C1V9 767 aa12.11□□□□□ -0.47
PTPN20-220ENST00000508715 APOA5Q6Q788 366 aa12.11□□□□□ -0.47
PTPN20-220ENST00000508715 BTNL9Q6UXG8 535 aa12.11□□□□□ -0.47
PTPN20-220ENST00000508715 BRF1Q92994 677 aa12.11□□□□□ -0.47
PTPN20-220ENST00000508715 TANGO6Q9C0B7 1094 aa12.11□□□□□ -0.47
PTPN20-220ENST00000508715 GPCPD1Q9NPB8 672 aa12.11□□□□□ -0.47
PTPN20-220ENST00000508715 CPA4Q9UI42 421 aa12.11□□□□□ -0.47
PTPN20-220ENST00000508715 PPP1R9AQ9ULJ8 1098 aa12.11□□□□□ -0.47
PTPN20-220ENST00000508715 CYP46A1Q9Y6A2 500 aa12.11□□□□□ -0.47
PTPN20-220ENST00000508715 LCTP09848 1927 aa12.11□□□□□ -0.47
PTPN20-220ENST00000508715 CYTH3O43739 400 aa12.1□□□□□ -0.47
PTPN20-220ENST00000508715 PLA2G6O60733 806 aa12.1□□□□□ -0.47
PTPN20-220ENST00000508715 FLOT1O75955 427 aa12.1□□□□□ -0.47
PTPN20-220ENST00000508715 HSPA8P11142 646 aaKnown RBP12.1□□□□□ -0.47
PTPN20-220ENST00000508715 SLC16A2P36021 539 aa12.1□□□□□ -0.47
PTPN20-220ENST00000508715 IRX3P78415 501 aaPredicted RBP12.1□□□□□ -0.47
PTPN20-220ENST00000508715 SART3Q15020 963 aaKnown RBP12.1□□□□□ -0.47
PTPN20-220ENST00000508715 OTUD7BQ6GQQ9 843 aa12.1□□□□□ -0.47
PTPN20-220ENST00000508715 PARK7Q99497 189 aaKnown RBP12.1□□□□□ -0.47
PTPN20-220ENST00000508715 UBA5Q9GZZ9 404 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms