RNA–Protein interactions for RNA: ENST00000508708.1

CSNK1G3-204, Transcript of casein kinase 1 gamma 3, humanhuman

TSL 2

Gene CSNK1G3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-204ENST00000508708 TRIB2Q92519 343 aa27.81■■■□□ 2.04
CSNK1G3-204ENST00000508708 NUP88Q99567 741 aaPredicted RBP27.81■■■□□ 2.04
CSNK1G3-204ENST00000508708 MOV10L1Q9BXT6 1211 aaKnown RBP27.81■■■□□ 2.04
CSNK1G3-204ENST00000508708 NBPF3Q9H094 633 aa27.81■■■□□ 2.04
CSNK1G3-204ENST00000508708 SPATC1LQ9H0A9 340 aa27.81■■■□□ 2.04
CSNK1G3-204ENST00000508708 UNC93B1Q9H1C4 597 aa27.81■■■□□ 2.04
CSNK1G3-204ENST00000508708 ZNF236Q9UL36 1845 aa27.81■■■□□ 2.04
CSNK1G3-204ENST00000508708 HMGCRP04035 888 aa27.8■■■□□ 2.04
CSNK1G3-204ENST00000508708 CYP2B6P20813 491 aa27.8■■■□□ 2.04
CSNK1G3-204ENST00000508708 MFAP1P55081 439 aaKnown RBP27.8■■■□□ 2.04
CSNK1G3-204ENST00000508708 CCAR1Q8IX12 1150 aaKnown RBP27.8■■■□□ 2.04
CSNK1G3-204ENST00000508708 IL25Q9H293 177 aa27.8■■■□□ 2.04
CSNK1G3-204ENST00000508708 PPP1R9AQ9ULJ8 1098 aa27.8■■■□□ 2.04
CSNK1G3-204ENST00000508708 COL11A1P12107 1806 aaPredicted RBP27.8■■■□□ 2.04
CSNK1G3-204ENST00000508708 GJB1P08034 283 aa27.79■■■□□ 2.04
CSNK1G3-204ENST00000508708 LRRC47Q8N1G4 583 aaKnown RBP27.79■■■□□ 2.04
CSNK1G3-204ENST00000508708 GMCL1P1Q8NEA9 526 aa27.79■■■□□ 2.04
CSNK1G3-204ENST00000508708 RNF208Q9H0X6 261 aa27.79■■■□□ 2.04
CSNK1G3-204ENST00000508708 IL17RBQ9NRM6 502 aa27.79■■■□□ 2.04
CSNK1G3-204ENST00000508708 PTPREP23469 700 aa27.78■■■□□ 2.04
CSNK1G3-204ENST00000508708 NOVP48745 357 aa27.78■■■□□ 2.04
CSNK1G3-204ENST00000508708 GRB14Q14449 540 aa27.78■■■□□ 2.04
CSNK1G3-204ENST00000508708 SHCBP1Q8NEM2 672 aa27.78■■■□□ 2.04
CSNK1G3-204ENST00000508708 REPS2Q8NFH8 660 aa27.78■■■□□ 2.04
CSNK1G3-204ENST00000508708 APBA2Q99767 749 aa27.78■■■□□ 2.04
CSNK1G3-204ENST00000508708 PAK6Q9NQU5 681 aaPredicted RBP27.78■■■□□ 2.04
CSNK1G3-204ENST00000508708 TSPY2A6NKD2 308 aa27.77■■■□□ 2.04
CSNK1G3-204ENST00000508708 RAD21O60216 631 aa27.77■■■□□ 2.04
CSNK1G3-204ENST00000508708 RGS2P41220 211 aa27.77■■■□□ 2.04
CSNK1G3-204ENST00000508708 GJA8P48165 433 aa27.77■■■□□ 2.04
CSNK1G3-204ENST00000508708 TRIM32Q13049 653 aa27.77■■■□□ 2.04
CSNK1G3-204ENST00000508708 MAP2K5Q13163 448 aa27.77■■■□□ 2.04
CSNK1G3-204ENST00000508708 TMEM132BQ14DG7 1078 aa27.77■■■□□ 2.04
CSNK1G3-204ENST00000508708 TBC1D10CQ8IV04 446 aa27.77■■■□□ 2.04
CSNK1G3-204ENST00000508708 SLC15A5A6NIM6 579 aa27.76■■■□□ 2.03
CSNK1G3-204ENST00000508708 NMT2O60551 498 aa27.76■■■□□ 2.03
CSNK1G3-204ENST00000508708 HAND2P61296 217 aa27.76■■■□□ 2.03
CSNK1G3-204ENST00000508708 MAP3K21Q5TCX8 1036 aa27.76■■■□□ 2.03
CSNK1G3-204ENST00000508708 VWA5AO00534 786 aa27.75■■■□□ 2.03
CSNK1G3-204ENST00000508708 HOXC6P09630 235 aa27.75■■■□□ 2.03
CSNK1G3-204ENST00000508708 ERCC3P19447 782 aa27.75■■■□□ 2.03
CSNK1G3-204ENST00000508708 CCL14Q16627 93 aa27.75■■■□□ 2.03
CSNK1G3-204ENST00000508708 WDR78Q5VTH9 848 aa27.75■■■□□ 2.03
CSNK1G3-204ENST00000508708 NKX2-3Q8TAU0 364 aa27.75■■■□□ 2.03
CSNK1G3-204ENST00000508708 STAG1Q8WVM7 1258 aa27.75■■■□□ 2.03
CSNK1G3-204ENST00000508708 SLF1Q9BQI6 1058 aa27.75■■■□□ 2.03
CSNK1G3-204ENST00000508708 DSCC1Q9BVC3 393 aa27.75■■■□□ 2.03
CSNK1G3-204ENST00000508708 CWC22Q9HCG8 908 aaKnown RBP27.75■■■□□ 2.03
CSNK1G3-204ENST00000508708 ZNF214Q9UL59 606 aaPredicted RBP27.75■■■□□ 2.03
CSNK1G3-204ENST00000508708 RANBP6O60518 1105 aaKnown RBP27.74■■■□□ 2.03
CSNK1G3-204ENST00000508708 SAMD1Q6SPF0 538 aaPredicted RBP27.74■■■□□ 2.03
CSNK1G3-204ENST00000508708 U2AF1L4Q8WU68 220 aaKnown RBP27.74■■■□□ 2.03
CSNK1G3-204ENST00000508708 PCP11498 1178 aaKnown RBP27.73■■■□□ 2.03
CSNK1G3-204ENST00000508708 ZKSCAN1P17029 563 aaPredicted RBP27.73■■■□□ 2.03
CSNK1G3-204ENST00000508708 PPP4R3BQ5MIZ7 849 aa27.73■■■□□ 2.03
CSNK1G3-204ENST00000508708 AKNAD1Q5T1N1 836 aa27.73■■■□□ 2.03
CSNK1G3-204ENST00000508708 TRMT44Q8IYL2 757 aaKnown RBP27.73■■■□□ 2.03
CSNK1G3-204ENST00000508708 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.73■■■□□ 2.035e-7■■■■■ 36.8
CSNK1G3-204ENST00000508708 IVNS1ABPQ9Y6Y0 642 aa27.73■■■□□ 2.03
CSNK1G3-204ENST00000508708 RAD50Q92878 1312 aa27.72■■■□□ 2.03
CSNK1G3-204ENST00000508708 PLS1Q14651 629 aa27.72■■■□□ 2.03
CSNK1G3-204ENST00000508708 SLFN13Q68D06 897 aa27.72■■■□□ 2.03
CSNK1G3-204ENST00000508708 UBE2Q1Q7Z7E8 422 aa27.72■■■□□ 2.03
CSNK1G3-204ENST00000508708 MROH8Q9H579 483 aa27.72■■■□□ 2.03
CSNK1G3-204ENST00000508708 STX8Q9UNK0 236 aa27.72■■■□□ 2.03
CSNK1G3-204ENST00000508708 NEDD4P46934 1319 aa27.71■■■□□ 2.03
CSNK1G3-204ENST00000508708 SGPL1O95470 568 aa27.71■■■□□ 2.03
CSNK1G3-204ENST00000508708 IGHA2P01877 340 aa27.71■■■□□ 2.03
CSNK1G3-204ENST00000508708 RIOX2Q8IUF8 465 aa27.71■■■□□ 2.03
CSNK1G3-204ENST00000508708 GMCL1Q96IK5 515 aa27.71■■■□□ 2.03
CSNK1G3-204ENST00000508708 DEFB118Q96PH6 123 aa27.71■■■□□ 2.03
CSNK1G3-204ENST00000508708 FLRT1Q9NZU1 646 aa27.71■■■□□ 2.03
CSNK1G3-204ENST00000508708 RPTORQ8N122 1335 aa27.7■■■□□ 2.03
CSNK1G3-204ENST00000508708 STRNO43815 780 aa27.7■■■□□ 2.02
CSNK1G3-204ENST00000508708 PRKAR2AP13861 404 aaKnown RBP27.7■■■□□ 2.02
CSNK1G3-204ENST00000508708 CHMLP26374 656 aa27.7■■■□□ 2.02
CSNK1G3-204ENST00000508708 ADORA2AP29274 412 aa27.7■■■□□ 2.02
CSNK1G3-204ENST00000508708 RRP12Q5JTH9 1297 aaKnown RBP27.7■■■□□ 2.02
CSNK1G3-204ENST00000508708 RASGRP2Q7LDG7 609 aa27.7■■■□□ 2.02
CSNK1G3-204ENST00000508708 NCAPG2Q86XI2 1143 aa27.7■■■□□ 2.02
CSNK1G3-204ENST00000508708 PRPF38AQ8NAV1 312 aaKnown RBP27.7■■■□□ 2.02
CSNK1G3-204ENST00000508708 NPLOC4Q8TAT6 608 aa27.7■■■□□ 2.02
CSNK1G3-204ENST00000508708 CRISPLD2Q9H0B8 497 aa27.7■■■□□ 2.02
CSNK1G3-204ENST00000508708 TOMM22Q9NS69 142 aa27.7■■■□□ 2.02
CSNK1G3-204ENST00000508708 TCP11L1Q9NUJ3 509 aa27.7■■■□□ 2.02
CSNK1G3-204ENST00000508708 SLC25A27O95847 323 aa27.69■■■□□ 2.02
CSNK1G3-204ENST00000508708 BMP3P12645 472 aa27.69■■■□□ 2.02
CSNK1G3-204ENST00000508708 MFSD6Q6ZSS7 791 aa27.69■■■□□ 2.02
CSNK1G3-204ENST00000508708 ABRAQ8N0Z2 381 aa27.69■■■□□ 2.02
CSNK1G3-204ENST00000508708 RNF41Q9H4P4 317 aaPredicted RBP27.69■■■□□ 2.02
CSNK1G3-204ENST00000508708 FEM1BQ9UK73 627 aa27.69■■■□□ 2.02
CSNK1G3-204ENST00000508708 STAT3P40763 770 aa27.68■■■□□ 2.02
CSNK1G3-204ENST00000508708 CACNB2Q08289 660 aaPredicted RBP27.68■■■□□ 2.02
CSNK1G3-204ENST00000508708 CENPQQ7L2Z9 268 aaPredicted RBP27.68■■■□□ 2.02
CSNK1G3-204ENST00000508708 HMX1Q9NP08 348 aaPredicted RBP27.68■■■□□ 2.02
CSNK1G3-204ENST00000508708 ZNF213O14771 459 aa27.67■■■□□ 2.02
CSNK1G3-204ENST00000508708 ATP2A1O14983 1001 aa27.67■■■□□ 2.02
CSNK1G3-204ENST00000508708 SLC38A10Q9HBR0 1119 aa27.67■■■□□ 2.02
CSNK1G3-204ENST00000508708 COBLO75128 1261 aa27.66■■■□□ 2.02
CSNK1G3-204ENST00000508708 RCSD1Q6JBY9 416 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms