RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 AKAP17AQ02040 695 aaKnown RBP12.58□□□□□ -0.4
SH3RF1-203ENST00000508685 C16orf86Q6ZW13 317 aa12.58□□□□□ -0.4
SH3RF1-203ENST00000508685 PNMA1Q8ND90 353 aa12.58□□□□□ -0.4
SH3RF1-203ENST00000508685 MAP3K14Q99558 947 aa12.58□□□□□ -0.4
SH3RF1-203ENST00000508685 KAT14Q9H8E8 782 aa12.58□□□□□ -0.4
SH3RF1-203ENST00000508685 IFNKQ9P0W0 207 aa12.58□□□□□ -0.4
SH3RF1-203ENST00000508685 STX8Q9UNK0 236 aa12.58□□□□□ -0.4
SH3RF1-203ENST00000508685 WDHD1O75717 1129 aaPredicted RBP12.57□□□□□ -0.4
SH3RF1-203ENST00000508685 KIF20AO95235 890 aa12.57□□□□□ -0.4
SH3RF1-203ENST00000508685 CDK8P49336 464 aa12.57□□□□□ -0.4
SH3RF1-203ENST00000508685 SAFBQ15424 915 aaKnown RBP eCLIP12.57□□□□□ -0.4
SH3RF1-203ENST00000508685 RASGRP2Q7LDG7 609 aa12.57□□□□□ -0.4
SH3RF1-203ENST00000508685 TMC6Q7Z403 805 aa12.57□□□□□ -0.4
SH3RF1-203ENST00000508685 ZNF444Q8N0Y2 327 aaPredicted RBP12.57□□□□□ -0.4
SH3RF1-203ENST00000508685 EYA3Q99504 573 aa12.57□□□□□ -0.4
SH3RF1-203ENST00000508685 ARID3AQ99856 593 aa12.57□□□□□ -0.4
SH3RF1-203ENST00000508685 DDX4Q9NQI0 724 aaKnown RBP12.57□□□□□ -0.4
SH3RF1-203ENST00000508685 DDX41Q9UJV9 622 aaKnown RBP12.57□□□□□ -0.4
SH3RF1-203ENST00000508685 MORC2Q9Y6X9 1032 aaPredicted RBP12.57□□□□□ -0.4
SH3RF1-203ENST00000508685 PRPF3O43395 683 aaKnown RBP12.57□□□□□ -0.4
SH3RF1-203ENST00000508685 VEGFAP15692 232 aaPredicted RBP12.57□□□□□ -0.4
SH3RF1-203ENST00000508685 TOB1P50616 345 aaPredicted RBP12.57□□□□□ -0.4
SH3RF1-203ENST00000508685 FAM193AP78312 1265 aa12.57□□□□□ -0.4
SH3RF1-203ENST00000508685 FANCCQ00597 558 aa12.57□□□□□ -0.4
SH3RF1-203ENST00000508685 GABPB1Q06547 395 aaPredicted RBP12.57□□□□□ -0.4
SH3RF1-203ENST00000508685 ARID5BQ14865 1188 aa12.57□□□□□ -0.4
SH3RF1-203ENST00000508685 NCAPHQ15003 741 aa12.57□□□□□ -0.4
SH3RF1-203ENST00000508685 PTPAQ15257 358 aa12.57□□□□□ -0.4
SH3RF1-203ENST00000508685 RESP18Q5W5W9 173 aa12.57□□□□□ -0.4
SH3RF1-203ENST00000508685 FCHSD1Q86WN1 690 aa12.57□□□□□ -0.4
SH3RF1-203ENST00000508685 DGKHQ86XP1 1220 aa12.57□□□□□ -0.4
SH3RF1-203ENST00000508685 ERCC4Q92889 916 aaPredicted RBP12.57□□□□□ -0.4
SH3RF1-203ENST00000508685 L2HGDHQ9H9P8 463 aa12.57□□□□□ -0.4
SH3RF1-203ENST00000508685 MTMR7Q9Y216 660 aa12.57□□□□□ -0.4
SH3RF1-203ENST00000508685 SUGT1Q9Y2Z0 365 aa12.57□□□□□ -0.4
SH3RF1-203ENST00000508685 CD2APQ9Y5K6 639 aa12.57□□□□□ -0.4
SH3RF1-203ENST00000508685 FOCADQ5VW36 1801 aa12.57□□□□□ -0.4
SH3RF1-203ENST00000508685 MYH1P12882 1939 aa12.57□□□□□ -0.4
SH3RF1-203ENST00000508685 SCN9AQ15858 1988 aa12.56□□□□□ -0.4
SH3RF1-203ENST00000508685 MYL5Q02045 173 aa12.56□□□□□ -0.4
SH3RF1-203ENST00000508685 AOC3Q16853 763 aa12.56□□□□□ -0.4
SH3RF1-203ENST00000508685 PODNQ7Z5L7 613 aa12.56□□□□□ -0.4
SH3RF1-203ENST00000508685 KIAA0825Q8IV33 1275 aa12.56□□□□□ -0.4
SH3RF1-203ENST00000508685 STAG2Q8N3U4 1231 aa12.56□□□□□ -0.4
SH3RF1-203ENST00000508685 SRRTQ9BXP5 876 aaKnown RBP12.56□□□□□ -0.4
SH3RF1-203ENST00000508685 FOXP1Q9H334 677 aaPredicted RBP12.56□□□□□ -0.4
SH3RF1-203ENST00000508685 PCDHAC2Q9Y5I4 1007 aa12.56□□□□□ -0.4
SH3RF1-203ENST00000508685 FAM205CA6NFA0 338 aa12.55□□□□□ -0.4
SH3RF1-203ENST00000508685 USP27XA6NNY8 438 aa12.55□□□□□ -0.4
SH3RF1-203ENST00000508685 ECE2O60344 883 aa12.55□□□□□ -0.4
SH3RF1-203ENST00000508685 C7orf43Q8WVR3 580 aa12.55□□□□□ -0.4
SH3RF1-203ENST00000508685 PHF20Q9BVI0 1012 aa12.55□□□□□ -0.4
SH3RF1-203ENST00000508685 DACH1Q9UI36 760 aa12.55□□□□□ -0.4
SH3RF1-203ENST00000508685 A0A087WWV3 80 aa12.55□□□□□ -0.4
SH3RF1-203ENST00000508685 EARS2Q5JPH6 523 aaKnown RBP12.55□□□□□ -0.4
SH3RF1-203ENST00000508685 CT47A1Q5JQC4 288 aaPredicted RBP12.55□□□□□ -0.4
SH3RF1-203ENST00000508685 E4F1Q66K89 784 aaPredicted RBP12.55□□□□□ -0.4
SH3RF1-203ENST00000508685 APOBEC3HQ6NTF7 200 aaKnown RBP12.55□□□□□ -0.4
SH3RF1-203ENST00000508685 ARMCX5Q6P1M9 558 aa12.55□□□□□ -0.4
SH3RF1-203ENST00000508685 CNKSR1Q969H4 720 aa12.55□□□□□ -0.4
SH3RF1-203ENST00000508685 TEKT1Q969V4 418 aa12.55□□□□□ -0.4
SH3RF1-203ENST00000508685 CCDC34Q96HJ3 373 aa12.55□□□□□ -0.4
SH3RF1-203ENST00000508685 PPP1R13BQ96KQ4 1090 aa12.55□□□□□ -0.4
SH3RF1-203ENST00000508685 CLIC6Q96NY7 704 aa12.55□□□□□ -0.4
SH3RF1-203ENST00000508685 TMEM47Q9BQJ4 181 aa12.55□□□□□ -0.4
SH3RF1-203ENST00000508685 ZNF287Q9HBT7 754 aa12.55□□□□□ -0.4
SH3RF1-203ENST00000508685 TCP11L1Q9NUJ3 509 aa12.55□□□□□ -0.4
SH3RF1-203ENST00000508685 USP40Q9NVE5 1235 aa12.55□□□□□ -0.4
SH3RF1-203ENST00000508685 TRMT1Q9NXH9 659 aaKnown RBP12.55□□□□□ -0.4
SH3RF1-203ENST00000508685 ZNF215Q9UL58 517 aaPredicted RBP12.55□□□□□ -0.4
SH3RF1-203ENST00000508685 GOLGA6L9A6NEM1 432 aa12.54□□□□□ -0.4
SH3RF1-203ENST00000508685 DCAF8L1A6NGE4 600 aa12.54□□□□□ -0.4
SH3RF1-203ENST00000508685 C21orf2O43822 256 aa12.54□□□□□ -0.4
SH3RF1-203ENST00000508685 XBP1P17861 261 aa12.54□□□□□ -0.4
SH3RF1-203ENST00000508685 KIF5BP33176 963 aa12.54□□□□□ -0.4
SH3RF1-203ENST00000508685 UBASH3AP57075 661 aa12.54□□□□□ -0.4
SH3RF1-203ENST00000508685 NFIAQ12857 509 aa12.54□□□□□ -0.4
SH3RF1-203ENST00000508685 NPY5RQ15761 445 aa12.54□□□□□ -0.4
SH3RF1-203ENST00000508685 KANK3Q6NY19 840 aa12.54□□□□□ -0.4
SH3RF1-203ENST00000508685 CDC42EP5Q6NZY7 148 aa12.54□□□□□ -0.4
SH3RF1-203ENST00000508685 ANKS1AQ92625 1134 aa12.54□□□□□ -0.4
SH3RF1-203ENST00000508685 CABP5Q9NP86 173 aa12.54□□□□□ -0.4
SH3RF1-203ENST00000508685 MAD2L2Q9UI95 211 aa12.54□□□□□ -0.4
SH3RF1-203ENST00000508685 PCDHB6Q9Y5E3 794 aa12.54□□□□□ -0.4
SH3RF1-203ENST00000508685 ZSCAN12O43309 604 aa12.54□□□□□ -0.4
SH3RF1-203ENST00000508685 SERPINC1P01008 464 aa12.54□□□□□ -0.4
SH3RF1-203ENST00000508685 TPM1P09493 284 aa12.54□□□□□ -0.4
SH3RF1-203ENST00000508685 ATP2B1P20020 1258 aa12.54□□□□□ -0.4
SH3RF1-203ENST00000508685 CRKP46108 304 aa12.54□□□□□ -0.4
SH3RF1-203ENST00000508685 NT5C2P49902 561 aa12.54□□□□□ -0.4
SH3RF1-203ENST00000508685 CACNB3P54284 484 aa12.54□□□□□ -0.4
SH3RF1-203ENST00000508685 NOM1Q5C9Z4 860 aaKnown RBP12.54□□□□□ -0.4
SH3RF1-203ENST00000508685 DACT2Q5SW24 774 aa12.54□□□□□ -0.4
SH3RF1-203ENST00000508685 SHC4Q6S5L8 630 aa12.54□□□□□ -0.4
SH3RF1-203ENST00000508685 KRBA2Q6ZNG9 492 aa12.54□□□□□ -0.4
SH3RF1-203ENST00000508685 KRI1Q8N9T8 703 aaKnown RBP12.54□□□□□ -0.4
SH3RF1-203ENST00000508685 CEP95Q96GE4 821 aa12.54□□□□□ -0.4
SH3RF1-203ENST00000508685 PHLPP2Q6ZVD8 1323 aa12.54□□□□□ -0.4
SH3RF1-203ENST00000508685 SPDYE4A6NLX3 237 aa12.53□□□□□ -0.4
SH3RF1-203ENST00000508685 BIN1O00499 593 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms