RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 ITGAEP38570 1179 aa6.81□□□□□ -1.32
PDLIM5-211ENST00000508531 EIF4A3P38919 411 aaKnown RBP6.81□□□□□ -1.32
PDLIM5-211ENST00000508531 GALK1P51570 392 aa6.81□□□□□ -1.32
PDLIM5-211ENST00000508531 DUSP4Q13115 394 aa6.81□□□□□ -1.32
PDLIM5-211ENST00000508531 NMIQ13287 307 aaPredicted RBP6.81□□□□□ -1.32
PDLIM5-211ENST00000508531 MLECQ14165 292 aa6.81□□□□□ -1.32
PDLIM5-211ENST00000508531 NR0B2Q15466 257 aa6.81□□□□□ -1.32
PDLIM5-211ENST00000508531 ZNF605Q86T29 641 aa6.81□□□□□ -1.32
PDLIM5-211ENST00000508531 SMG5Q9UPR3 1016 aaKnown RBP6.81□□□□□ -1.32
PDLIM5-211ENST00000508531 SUPT16HQ9Y5B9 1047 aaKnown RBP6.81□□□□□ -1.32
PDLIM5-211ENST00000508531 IRF2BP1Q8IU81 584 aa6.8□□□□□ -1.32
PDLIM5-211ENST00000508531 SPPL2CQ8IUH8 684 aa6.8□□□□□ -1.32
PDLIM5-211ENST00000508531 ANKS4BQ8N8V4 417 aa6.8□□□□□ -1.32
PDLIM5-211ENST00000508531 INTS4Q96HW7 963 aaKnown RBP6.8□□□□□ -1.32
PDLIM5-211ENST00000508531 HDAC8Q9BY41 377 aa6.8□□□□□ -1.32
PDLIM5-211ENST00000508531 LRRC3Q9BY71 257 aa6.8□□□□□ -1.32
PDLIM5-211ENST00000508531 CWC22Q9HCG8 908 aaKnown RBP6.8□□□□□ -1.32
PDLIM5-211ENST00000508531 YBX2Q9Y2T7 364 aaKnown RBP6.8□□□□□ -1.32
PDLIM5-211ENST00000508531 PSPNO60542 156 aa6.79□□□□□ -1.32
PDLIM5-211ENST00000508531 RPL10P27635 214 aaKnown RBP6.79□□□□□ -1.32
PDLIM5-211ENST00000508531 POLR2BP30876 1174 aaKnown RBP6.79□□□□□ -1.32
PDLIM5-211ENST00000508531 PDE6BP35913 854 aa6.79□□□□□ -1.32
PDLIM5-211ENST00000508531 CRKP46108 304 aa6.79□□□□□ -1.32
PDLIM5-211ENST00000508531 RNF4P78317 190 aa6.79□□□□□ -1.32
PDLIM5-211ENST00000508531 CHRNEQ04844 493 aa6.79□□□□□ -1.32
PDLIM5-211ENST00000508531 OVOS1Q6IE37 1185 aa6.79□□□□□ -1.32
PDLIM5-211ENST00000508531 TMC3Q7Z5M5 1100 aa6.79□□□□□ -1.32
PDLIM5-211ENST00000508531 SIAH1Q8IUQ4 282 aa6.79□□□□□ -1.32
PDLIM5-211ENST00000508531 USHBP1Q8N6Y0 703 aa6.79□□□□□ -1.32
PDLIM5-211ENST00000508531 SYTL5Q8TDW5 730 aaPredicted RBP6.79□□□□□ -1.32
PDLIM5-211ENST00000508531 PCGF6Q9BYE7 350 aa6.79□□□□□ -1.32
PDLIM5-211ENST00000508531 MCOLN1Q9GZU1 580 aa6.79□□□□□ -1.32
PDLIM5-211ENST00000508531 KCNQ5Q9NR82 932 aa6.79□□□□□ -1.32
PDLIM5-211ENST00000508531 GMIPQ9P107 970 aa6.79□□□□□ -1.32
PDLIM5-211ENST00000508531 ARHGEF11O15085 1522 aa6.79□□□□□ -1.32
PDLIM5-211ENST00000508531 ROBO2Q9HCK4 1378 aa6.79□□□□□ -1.32
PDLIM5-211ENST00000508531 GREM1O60565 184 aa6.78□□□□□ -1.32
PDLIM5-211ENST00000508531 CIAPIN1Q6FI81 312 aa6.78□□□□□ -1.32
PDLIM5-211ENST00000508531 WAPLQ7Z5K2 1190 aa6.78□□□□□ -1.32
PDLIM5-211ENST00000508531 SIRT2Q8IXJ6 389 aa6.78□□□□□ -1.32
PDLIM5-211ENST00000508531 ENOX1Q8TC92 643 aaKnown RBP6.78□□□□□ -1.32
PDLIM5-211ENST00000508531 ZNF296Q8WUU4 475 aaPredicted RBP6.78□□□□□ -1.32
PDLIM5-211ENST00000508531 LINC01599Q8WXQ3 324 aa6.78□□□□□ -1.32
PDLIM5-211ENST00000508531 TCTN2Q96GX1 697 aa6.78□□□□□ -1.32
PDLIM5-211ENST00000508531 G6PC3Q9BUM1 346 aa6.78□□□□□ -1.32
PDLIM5-211ENST00000508531 FOXP3Q9BZS1 431 aa6.78□□□□□ -1.32
PDLIM5-211ENST00000508531 ZNF281Q9Y2X9 895 aa6.78□□□□□ -1.32
PDLIM5-211ENST00000508531 MRC2Q9UBG0 1479 aa6.78□□□□□ -1.32
PDLIM5-211ENST00000508531 MYOCOSA0A1B0GUC4 107 aa6.77□□□□□ -1.33
PDLIM5-211ENST00000508531 NUAK1O60285 661 aa6.77□□□□□ -1.33
PDLIM5-211ENST00000508531 USP2O75604 605 aaPredicted RBP6.77□□□□□ -1.33
PDLIM5-211ENST00000508531 ATE1O95260 518 aa6.77□□□□□ -1.33
PDLIM5-211ENST00000508531 LINC00310P59036 64 aa6.77□□□□□ -1.33
PDLIM5-211ENST00000508531 SNW1Q13573 536 aaKnown RBP6.77□□□□□ -1.33
PDLIM5-211ENST00000508531 SNX17Q15036 470 aa6.77□□□□□ -1.33
PDLIM5-211ENST00000508531 NBPF12Q5TAG4 269 aaPredicted RBP6.77□□□□□ -1.33
PDLIM5-211ENST00000508531 RNF111Q6ZNA4 994 aa6.77□□□□□ -1.33
PDLIM5-211ENST00000508531 GIPC2Q8TF65 315 aa6.77□□□□□ -1.33
PDLIM5-211ENST00000508531 SHISA4Q96DD7 197 aa6.77□□□□□ -1.33
PDLIM5-211ENST00000508531 ZNF512BQ96KM6 892 aaPredicted RBP6.77□□□□□ -1.33
PDLIM5-211ENST00000508531 BCL2L13Q9BXK5 485 aa6.77□□□□□ -1.33
PDLIM5-211ENST00000508531 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.77□□□□□ -1.33
PDLIM5-211ENST00000508531 UBP1Q9NZI7 540 aa6.77□□□□□ -1.33
PDLIM5-211ENST00000508531 ADAMTS1Q9UHI8 967 aa6.77□□□□□ -1.33
PDLIM5-211ENST00000508531 GGT7Q9UJ14 662 aa6.77□□□□□ -1.33
PDLIM5-211ENST00000508531 ZMYM5Q9UJ78 669 aa6.77□□□□□ -1.33
PDLIM5-211ENST00000508531 LAMC3Q9Y6N6 1575 aa6.77□□□□□ -1.33
PDLIM5-211ENST00000508531 SSU72P8A0A1W2PR75 194 aa6.76□□□□□ -1.33
PDLIM5-211ENST00000508531 NOTOA8MTQ0 251 aa6.76□□□□□ -1.33
PDLIM5-211ENST00000508531 EFEMP2O95967 443 aa6.76□□□□□ -1.33
PDLIM5-211ENST00000508531 CLCQ05315 142 aa6.76□□□□□ -1.33
PDLIM5-211ENST00000508531 NBPF9Q3BBW0 867 aa6.76□□□□□ -1.33
PDLIM5-211ENST00000508531 SEZ6Q53EL9 994 aa6.76□□□□□ -1.33
PDLIM5-211ENST00000508531 GK5Q6ZS86 529 aa6.76□□□□□ -1.33
PDLIM5-211ENST00000508531 DAGLBQ8NCG7 672 aa6.76□□□□□ -1.33
PDLIM5-211ENST00000508531 ATG4CQ96DT6 458 aa6.76□□□□□ -1.33
PDLIM5-211ENST00000508531 KRTAP4-9Q9BYQ8 210 aa6.76□□□□□ -1.33
PDLIM5-211ENST00000508531 ZNF552Q9H707 407 aaPredicted RBP6.76□□□□□ -1.33
PDLIM5-211ENST00000508531 TCFL5Q9UL49 500 aa6.76□□□□□ -1.33
PDLIM5-211ENST00000508531 BAZ1BQ9UIG0 1483 aaKnown RBP6.75□□□□□ -1.33
PDLIM5-211ENST00000508531 KRTAP9-7A8MTY7 169 aa6.75□□□□□ -1.33
PDLIM5-211ENST00000508531 PEX10O60683 326 aa6.75□□□□□ -1.33
PDLIM5-211ENST00000508531 FKTNO75072 461 aa6.75□□□□□ -1.33
PDLIM5-211ENST00000508531 PCBP3P57721 371 aaKnown RBP6.75□□□□□ -1.33
PDLIM5-211ENST00000508531 DLG4P78352 724 aa6.75□□□□□ -1.33
PDLIM5-211ENST00000508531 MRPL58Q14197 206 aaKnown RBP6.75□□□□□ -1.33
PDLIM5-211ENST00000508531 CDCP2Q5VXM1 449 aa6.75□□□□□ -1.33
PDLIM5-211ENST00000508531 TMEM132EQ6IEE7 984 aa6.75□□□□□ -1.33
PDLIM5-211ENST00000508531 ZPBP2Q6X784 338 aa6.75□□□□□ -1.33
PDLIM5-211ENST00000508531 HS2ST1Q7LGA3 356 aa6.75□□□□□ -1.33
PDLIM5-211ENST00000508531 AMIGO3Q86WK7 504 aa6.75□□□□□ -1.33
PDLIM5-211ENST00000508531 ZNF655Q8N720 491 aaPredicted RBP6.75□□□□□ -1.33
PDLIM5-211ENST00000508531 IRF2BPLQ9H1B7 796 aa6.75□□□□□ -1.33
PDLIM5-211ENST00000508531 CNNM2Q9H8M5 875 aa6.75□□□□□ -1.33
PDLIM5-211ENST00000508531 EHMT1Q9H9B1 1298 aa6.75□□□□□ -1.33
PDLIM5-211ENST00000508531 MINPP1Q9UNW1 487 aa6.75□□□□□ -1.33
PDLIM5-211ENST00000508531 TMEM82A0PJX8 343 aa6.74□□□□□ -1.33
PDLIM5-211ENST00000508531 SEMA7AO75326 666 aa6.74□□□□□ -1.33
PDLIM5-211ENST00000508531 CLEC3AO75596 197 aa6.74□□□□□ -1.33
PDLIM5-211ENST00000508531 PRAMEF1O95521 474 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms