RNA–Protein interactions for RNA: ENST00000508504.1

TRIM60-203, Transcript of tripartite motif containing 60, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM60, Length 1,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60-203ENST00000508504 TREML2Q5T2D2 321 aa20.38■□□□□ 0.85
TRIM60-203ENST00000508504 TTBK2Q6IQ55 1244 aa20.38■□□□□ 0.85
TRIM60-203ENST00000508504 CYP4F22Q6NT55 531 aa20.38■□□□□ 0.85
TRIM60-203ENST00000508504 SYNE3Q6ZMZ3 975 aa20.38■□□□□ 0.85
TRIM60-203ENST00000508504 ZIC5Q96T25 663 aa20.38■□□□□ 0.85
TRIM60-203ENST00000508504 GPCPD1Q9NPB8 672 aa20.38■□□□□ 0.85
TRIM60-203ENST00000508504 C19orf81C9J6K1 198 aa20.38■□□□□ 0.85
TRIM60-203ENST00000508504 CXCL11O14625 94 aa20.38■□□□□ 0.85
TRIM60-203ENST00000508504 PFKFB2O60825 505 aa20.38■□□□□ 0.85
TRIM60-203ENST00000508504 PLEKHA8P1O95397 391 aa20.38■□□□□ 0.85
TRIM60-203ENST00000508504 ZNF543Q08ER8 600 aa20.38■□□□□ 0.85
TRIM60-203ENST00000508504 GRM4Q14833 912 aa20.38■□□□□ 0.85
TRIM60-203ENST00000508504 GMCL1Q96IK5 515 aa20.38■□□□□ 0.85
TRIM60-203ENST00000508504 SLKQ9H2G2 1235 aaPredicted RBP20.38■□□□□ 0.85
TRIM60-203ENST00000508504 PALM3A6NDB9 673 aaPredicted RBP20.37■□□□□ 0.85
TRIM60-203ENST00000508504 SLC10A3P09131 477 aa20.37■□□□□ 0.85
TRIM60-203ENST00000508504 ZBTB48P10074 688 aaPredicted RBP20.37■□□□□ 0.85
TRIM60-203ENST00000508504 SLC16A2P36021 539 aa20.37■□□□□ 0.85
TRIM60-203ENST00000508504 MCM2P49736 904 aa20.37■□□□□ 0.85
TRIM60-203ENST00000508504 USP14P54578 494 aa20.37■□□□□ 0.85
TRIM60-203ENST00000508504 RTN1Q16799 776 aa20.37■□□□□ 0.85
TRIM60-203ENST00000508504 CCDC96Q2M329 555 aa20.37■□□□□ 0.85
TRIM60-203ENST00000508504 CCDC83Q8IWF9 413 aa20.37■□□□□ 0.85
TRIM60-203ENST00000508504 CCDC82Q8N4S0 544 aa20.37■□□□□ 0.85
TRIM60-203ENST00000508504 GTF3C6Q969F1 213 aa20.37■□□□□ 0.85
TRIM60-203ENST00000508504 C12orf42Q96LP6 360 aa20.37■□□□□ 0.85
TRIM60-203ENST00000508504 UBA5Q9GZZ9 404 aa20.37■□□□□ 0.85
TRIM60-203ENST00000508504 FBXO28Q9NVF7 368 aa20.37■□□□□ 0.85
TRIM60-203ENST00000508504 ISY1Q9ULR0 285 aaKnown RBP20.37■□□□□ 0.85
TRIM60-203ENST00000508504 K7ELQ4 463 aaPredicted RBP20.36■□□□□ 0.85
TRIM60-203ENST00000508504 PARP1P09874 1014 aaKnown RBP20.36■□□□□ 0.85
TRIM60-203ENST00000508504 BMP3P12645 472 aa20.36■□□□□ 0.85
TRIM60-203ENST00000508504 SNAPC2Q13487 334 aa20.36■□□□□ 0.85
TRIM60-203ENST00000508504 GADL1Q6ZQY3 521 aa20.36■□□□□ 0.85
TRIM60-203ENST00000508504 PAXIP1Q6ZW49 1069 aaPredicted RBP20.36■□□□□ 0.85
TRIM60-203ENST00000508504 DCAF4Q8WV16 495 aa20.36■□□□□ 0.85
TRIM60-203ENST00000508504 LPAR1Q92633 364 aa20.36■□□□□ 0.85
TRIM60-203ENST00000508504 LOC285556D6RIA3 1793 aa20.36■□□□□ 0.85
TRIM60-203ENST00000508504 NID2Q14112 1375 aa20.36■□□□□ 0.85
TRIM60-203ENST00000508504 RASSF10A6NK89 507 aa20.35■□□□□ 0.85
TRIM60-203ENST00000508504 CALM1P0DP23 149 aa20.35■□□□□ 0.85
TRIM60-203ENST00000508504 CALM2P0DP24 149 aa20.35■□□□□ 0.85
TRIM60-203ENST00000508504 CALM3P0DP25 149 aa20.35■□□□□ 0.85
TRIM60-203ENST00000508504 SLC4A3P48751 1232 aa20.35■□□□□ 0.85
TRIM60-203ENST00000508504 HSCBQ8IWL3 235 aa20.35■□□□□ 0.85
TRIM60-203ENST00000508504 SRBD1Q8N5C6 995 aaKnown RBP20.35■□□□□ 0.85
TRIM60-203ENST00000508504 IL27Q8NEV9 243 aa20.35■□□□□ 0.85
TRIM60-203ENST00000508504 CTCFLQ8NI51 663 aaPredicted RBP20.35■□□□□ 0.85
TRIM60-203ENST00000508504 BRI3BPQ8WY22 251 aa20.35■□□□□ 0.85
TRIM60-203ENST00000508504 HHIPL1Q96JK4 782 aa20.35■□□□□ 0.85
TRIM60-203ENST00000508504 RPAP3Q9H6T3 665 aaPredicted RBP20.35■□□□□ 0.85
TRIM60-203ENST00000508504 TMEM232C9JQI7 657 aa20.35■□□□□ 0.85
TRIM60-203ENST00000508504 KLRF2D3W0D1 207 aa20.35■□□□□ 0.85
TRIM60-203ENST00000508504 CYTH3O43739 400 aa20.35■□□□□ 0.85
TRIM60-203ENST00000508504 CTDNEP1O95476 244 aa20.35■□□□□ 0.85
TRIM60-203ENST00000508504 RCAN1P53805 252 aa20.35■□□□□ 0.85
TRIM60-203ENST00000508504 NTRK3Q16288 839 aa20.35■□□□□ 0.85
TRIM60-203ENST00000508504 ZSCAN31Q96LW9 406 aaPredicted RBP20.35■□□□□ 0.85
TRIM60-203ENST00000508504 MAP3K14Q99558 947 aa20.35■□□□□ 0.85
TRIM60-203ENST00000508504 PTPN18Q99952 460 aa20.35■□□□□ 0.85
TRIM60-203ENST00000508504 TMOD4Q9NZQ9 345 aa20.35■□□□□ 0.85
TRIM60-203ENST00000508504 FUT2Q10981 343 aa20.34■□□□□ 0.85
TRIM60-203ENST00000508504 DEFB115Q30KQ5 88 aa20.34■□□□□ 0.85
TRIM60-203ENST00000508504 GPAT2Q6NUI2 795 aa20.34■□□□□ 0.85
TRIM60-203ENST00000508504 TMTC3Q6ZXV5 915 aa20.34■□□□□ 0.85
TRIM60-203ENST00000508504 TANGO6Q9C0B7 1094 aa20.34■□□□□ 0.85
TRIM60-203ENST00000508504 SH2B1Q9NRF2 756 aaPredicted RBP20.34■□□□□ 0.85
TRIM60-203ENST00000508504 CCL15-CCL14A0A0B4J2E2 113 aa20.33■□□□□ 0.85
TRIM60-203ENST00000508504 WDR46O15213 610 aaKnown RBP20.33■□□□□ 0.85
TRIM60-203ENST00000508504 GTF2A2P52657 109 aa20.33■□□□□ 0.85
TRIM60-203ENST00000508504 CCL15Q16663 113 aa20.33■□□□□ 0.85
TRIM60-203ENST00000508504 ASPRV1Q53RT3 343 aa20.33■□□□□ 0.85
TRIM60-203ENST00000508504 SAMD1Q6SPF0 538 aaPredicted RBP20.33■□□□□ 0.85
TRIM60-203ENST00000508504 PHKBQ93100 1093 aa20.33■□□□□ 0.85
TRIM60-203ENST00000508504 RLFQ13129 1914 aa20.33■□□□□ 0.84
TRIM60-203ENST00000508504 hCG_1642624A0A1W2PR95 340 aa20.32■□□□□ 0.84
TRIM60-203ENST00000508504 JAK2O60674 1132 aa20.32■□□□□ 0.84
TRIM60-203ENST00000508504 KIF5BP33176 963 aa20.32■□□□□ 0.84
TRIM60-203ENST00000508504 ANP32AP39687 249 aaKnown RBP20.32■□□□□ 0.84
TRIM60-203ENST00000508504 C1QTNF8P60827 252 aa20.32■□□□□ 0.84
TRIM60-203ENST00000508504 PROCA1Q8NCQ7 364 aaPredicted RBP20.32■□□□□ 0.84
TRIM60-203ENST00000508504 PIBF1Q8WXW3 757 aa20.32■□□□□ 0.84
TRIM60-203ENST00000508504 CCDC102AQ96A19 550 aa20.32■□□□□ 0.84
TRIM60-203ENST00000508504 FOXD4L1Q9NU39 408 aa20.32■□□□□ 0.84
TRIM60-203ENST00000508504 PARP14Q460N5 1801 aa20.32■□□□□ 0.84
TRIM60-203ENST00000508504 BTBD19C9JJ37 291 aa20.32■□□□□ 0.84
TRIM60-203ENST00000508504 AOC2O75106 756 aa20.32■□□□□ 0.84
TRIM60-203ENST00000508504 SNAP25P60880 206 aa20.32■□□□□ 0.84
TRIM60-203ENST00000508504 GPATCH4Q5T3I0 446 aaKnown RBP20.32■□□□□ 0.84
TRIM60-203ENST00000508504 SPRYD3Q8NCJ5 442 aa20.32■□□□□ 0.84
TRIM60-203ENST00000508504 CAPNS2Q96L46 248 aa20.32■□□□□ 0.84
TRIM60-203ENST00000508504 VAT1LQ9HCJ6 419 aa20.32■□□□□ 0.84
TRIM60-203ENST00000508504 CETPP11597 493 aa20.31■□□□□ 0.84
TRIM60-203ENST00000508504 STAT2P52630 851 aa20.31■□□□□ 0.84
TRIM60-203ENST00000508504 IKQ13123 557 aaPredicted RBP20.31■□□□□ 0.84
TRIM60-203ENST00000508504 CUL4AQ13619 759 aa20.31■□□□□ 0.84
TRIM60-203ENST00000508504 CATSPERGQ6ZRH7 1159 aa20.31■□□□□ 0.84
TRIM60-203ENST00000508504 FAM43AQ8N2R8 423 aa20.31■□□□□ 0.84
TRIM60-203ENST00000508504 RBM28Q9NW13 759 aaKnown RBP20.31■□□□□ 0.84
TRIM60-203ENST00000508504 AGTPBP1Q9UPW5 1226 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms