RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 BMP3P12645 472 aa17.62■□□□□ 0.41
RNF4-210ENST00000508235 PSMC4P43686 418 aa17.62■□□□□ 0.41
RNF4-210ENST00000508235 PRMT2P55345 433 aa17.62■□□□□ 0.41
RNF4-210ENST00000508235 KRT32Q14532 448 aa17.62■□□□□ 0.41
RNF4-210ENST00000508235 CCAR1Q8IX12 1150 aaKnown RBP17.62■□□□□ 0.41
RNF4-210ENST00000508235 DCAF4Q8WV16 495 aa17.62■□□□□ 0.41
RNF4-210ENST00000508235 SLF1Q9BQI6 1058 aa17.62■□□□□ 0.41
RNF4-210ENST00000508235 MTA3Q9BTC8 594 aa17.62■□□□□ 0.41
RNF4-210ENST00000508235 PAGR1Q9BTK6 254 aa17.62■□□□□ 0.41
RNF4-210ENST00000508235 KAT14Q9H8E8 782 aa17.62■□□□□ 0.41
RNF4-210ENST00000508235 RBPJLQ9UBG7 517 aa17.62■□□□□ 0.41
RNF4-210ENST00000508235 TRIM17Q9Y577 477 aa17.62■□□□□ 0.41
RNF4-210ENST00000508235 TNKSO95271 1327 aa17.62■□□□□ 0.41
RNF4-210ENST00000508235 A0A0G2JMZ2 1700 aa17.61■□□□□ 0.41
RNF4-210ENST00000508235 FMNL1O95466 1100 aaPredicted RBP17.61■□□□□ 0.41
RNF4-210ENST00000508235 MCCP23508 829 aa17.61■□□□□ 0.41
RNF4-210ENST00000508235 ERVK-9P63128 1117 aa17.61■□□□□ 0.41
RNF4-210ENST00000508235 ERVK-24P63145 666 aa17.61■□□□□ 0.41
RNF4-210ENST00000508235 TSGA10IPQ3SY00 556 aa17.61■□□□□ 0.41
RNF4-210ENST00000508235 RCSD1Q6JBY9 416 aa17.61■□□□□ 0.41
RNF4-210ENST00000508235 STOX1Q6ZVD7 989 aa17.61■□□□□ 0.41
RNF4-210ENST00000508235 OTOP1Q7RTM1 612 aa17.61■□□□□ 0.41
RNF4-210ENST00000508235 FAM160B2Q86V87 743 aa17.61■□□□□ 0.41
RNF4-210ENST00000508235 PRPF38AQ8NAV1 312 aaKnown RBP17.61■□□□□ 0.41
RNF4-210ENST00000508235 CHURC1Q8WUH1 139 aa17.61■□□□□ 0.41
RNF4-210ENST00000508235 NUP88Q99567 741 aaPredicted RBP17.61■□□□□ 0.41
RNF4-210ENST00000508235 PPP1R9AQ9ULJ8 1098 aa17.61■□□□□ 0.41
RNF4-210ENST00000508235 ISY1Q9ULR0 285 aaKnown RBP17.61■□□□□ 0.41
RNF4-210ENST00000508235 FDX1P10109 184 aa17.6■□□□□ 0.41
RNF4-210ENST00000508235 MCM5P33992 734 aa17.6■□□□□ 0.41
RNF4-210ENST00000508235 HSPA4P34932 840 aa17.6■□□□□ 0.41
RNF4-210ENST00000508235 STAT2P52630 851 aa17.6■□□□□ 0.41
RNF4-210ENST00000508235 IFIT1BQ5T764 474 aaKnown RBP17.6■□□□□ 0.41
RNF4-210ENST00000508235 CYB5R4Q7L1T6 521 aa17.6■□□□□ 0.41
RNF4-210ENST00000508235 ENAHQ8N8S7 591 aaPredicted RBP17.6■□□□□ 0.41
RNF4-210ENST00000508235 NKX2-3Q8TAU0 364 aa17.6■□□□□ 0.41
RNF4-210ENST00000508235 COA7Q96BR5 231 aa17.6■□□□□ 0.41
RNF4-210ENST00000508235 TXNRD2Q9NNW7 524 aa17.6■□□□□ 0.41
RNF4-210ENST00000508235 ADAMTS5Q9UNA0 930 aa17.6■□□□□ 0.41
RNF4-210ENST00000508235 COL11A1P12107 1806 aaPredicted RBP17.59■□□□□ 0.41
RNF4-210ENST00000508235 TNPO2O14787 897 aaKnown RBP17.59■□□□□ 0.41
RNF4-210ENST00000508235 IFIT3O14879 490 aaKnown RBP17.59■□□□□ 0.41
RNF4-210ENST00000508235 PLA2G6O60733 806 aa17.59■□□□□ 0.41
RNF4-210ENST00000508235 MAPK4P31152 587 aa17.59■□□□□ 0.41
RNF4-210ENST00000508235 IKQ13123 557 aaPredicted RBP17.59■□□□□ 0.41
RNF4-210ENST00000508235 CCDC96Q2M329 555 aa17.59■□□□□ 0.41
RNF4-210ENST00000508235 FBXO46Q6PJ61 603 aaPredicted RBP17.59■□□□□ 0.41
RNF4-210ENST00000508235 SAMD1Q6SPF0 538 aaPredicted RBP17.59■□□□□ 0.41
RNF4-210ENST00000508235 MB21D2Q8IYB1 491 aaPredicted RBP17.59■□□□□ 0.41
RNF4-210ENST00000508235 TNS4Q8IZW8 715 aa17.59■□□□□ 0.41
RNF4-210ENST00000508235 PNMA1Q8ND90 353 aa17.59■□□□□ 0.41
RNF4-210ENST00000508235 ATG4CQ96DT6 458 aa17.59■□□□□ 0.41
RNF4-210ENST00000508235 ARHGAP39Q9C0H5 1083 aa17.59■□□□□ 0.41
RNF4-210ENST00000508235 CTDP1Q9Y5B0 961 aaPredicted RBP17.59■□□□□ 0.41
RNF4-210ENST00000508235 TAF6LQ9Y6J9 622 aa17.59■□□□□ 0.41
RNF4-210ENST00000508235 TMEM232C9JQI7 657 aa17.58■□□□□ 0.4
RNF4-210ENST00000508235 VWA5AO00534 786 aa17.58■□□□□ 0.4
RNF4-210ENST00000508235 HMGB1P09429 215 aaKnown RBP17.58■□□□□ 0.4
RNF4-210ENST00000508235 PDHBP11177 359 aa17.58■□□□□ 0.4
RNF4-210ENST00000508235 WTAPQ15007 396 aa17.58■□□□□ 0.4
RNF4-210ENST00000508235 SEC23AQ15436 765 aa17.58■□□□□ 0.4
RNF4-210ENST00000508235 TMTC2Q8N394 836 aa17.58■□□□□ 0.4
RNF4-210ENST00000508235 TMEM87BQ96K49 555 aa17.58■□□□□ 0.4
RNF4-210ENST00000508235 TRIM47Q96LD4 638 aa17.58■□□□□ 0.4
RNF4-210ENST00000508235 NEK1Q96PY6 1258 aa17.58■□□□□ 0.4
RNF4-210ENST00000508235 MCOLN1Q9GZU1 580 aa17.58■□□□□ 0.4
RNF4-210ENST00000508235 CWC22Q9HCG8 908 aaKnown RBP17.58■□□□□ 0.4
RNF4-210ENST00000508235 FBXO28Q9NVF7 368 aa17.58■□□□□ 0.4
RNF4-210ENST00000508235 BTBD7Q9P203 1132 aa17.58■□□□□ 0.4
RNF4-210ENST00000508235 MTMR7Q9Y216 660 aa17.58■□□□□ 0.4
RNF4-210ENST00000508235 ZSWIM8A7E2V4 1837 aa17.58■□□□□ 0.4
RNF4-210ENST00000508235 ZBED4O75132 1171 aa17.57■□□□□ 0.4
RNF4-210ENST00000508235 CNMDO75829 334 aa17.57■□□□□ 0.4
RNF4-210ENST00000508235 TMEM67Q5HYA8 995 aa17.57■□□□□ 0.4
RNF4-210ENST00000508235 GPATCH4Q5T3I0 446 aaKnown RBP17.57■□□□□ 0.4
RNF4-210ENST00000508235 KCNB2Q92953 911 aa17.57■□□□□ 0.4
RNF4-210ENST00000508235 KIFC2Q96AC6 838 aa17.57■□□□□ 0.4
RNF4-210ENST00000508235 PTPN22Q9Y2R2 807 aa17.57■□□□□ 0.4
RNF4-210ENST00000508235 GTF3C3Q9Y5Q9 886 aa17.57■□□□□ 0.4
RNF4-210ENST00000508235 WDR19Q8NEZ3 1342 aa17.56■□□□□ 0.4
RNF4-210ENST00000508235 PRC1O43663 620 aa17.56■□□□□ 0.4
RNF4-210ENST00000508235 ECM2O94769 699 aaPredicted RBP17.56■□□□□ 0.4
RNF4-210ENST00000508235 SLC25A27O95847 323 aa17.56■□□□□ 0.4
RNF4-210ENST00000508235 SNHG28P0DPA3 235 aa17.56■□□□□ 0.4
RNF4-210ENST00000508235 CTGFP29279 349 aa17.56■□□□□ 0.4
RNF4-210ENST00000508235 COPB2P35606 906 aa17.56■□□□□ 0.4
RNF4-210ENST00000508235 PLS1Q14651 629 aa17.56■□□□□ 0.4
RNF4-210ENST00000508235 Q3C1V9 767 aa17.56■□□□□ 0.4
RNF4-210ENST00000508235 POTEEQ6S8J3 1075 aa17.56■□□□□ 0.4
RNF4-210ENST00000508235 KCTD1Q719H9 257 aa17.56■□□□□ 0.4
RNF4-210ENST00000508235 SHCBP1Q8NEM2 672 aa17.56■□□□□ 0.4
RNF4-210ENST00000508235 SPATC1LQ9H0A9 340 aa17.56■□□□□ 0.4
RNF4-210ENST00000508235 SRRDQ9UH36 339 aa17.56■□□□□ 0.4
RNF4-210ENST00000508235 OAZ1P54368 228 aa17.55■□□□□ 0.4
RNF4-210ENST00000508235 ANTXR2P58335 489 aa17.55■□□□□ 0.4
RNF4-210ENST00000508235 ZNF543Q08ER8 600 aa17.55■□□□□ 0.4
RNF4-210ENST00000508235 ASPRV1Q53RT3 343 aa17.55■□□□□ 0.4
RNF4-210ENST00000508235 CHST3Q7LGC8 479 aa17.55■□□□□ 0.4
RNF4-210ENST00000508235 IGDCC4Q8TDY8 1250 aa17.55■□□□□ 0.4
RNF4-210ENST00000508235 SOCS4Q8WXH5 440 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms