RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 SOWAHDA6NJG2 315 aa12.4□□□□□ -0.42
LIN54-207ENST00000508171 USP5P45974 858 aa12.4□□□□□ -0.42
LIN54-207ENST00000508171 NFIXQ14938 502 aa12.4□□□□□ -0.42
LIN54-207ENST00000508171 CDKAL1Q5VV42 579 aa12.4□□□□□ -0.42
LIN54-207ENST00000508171 PDXDC2PQ6P474 469 aa12.4□□□□□ -0.42
LIN54-207ENST00000508171 IQUBQ8NA54 791 aa12.4□□□□□ -0.42
LIN54-207ENST00000508171 SLC44A5Q8NCS7 719 aa12.4□□□□□ -0.42
LIN54-207ENST00000508171 PNMA1Q8ND90 353 aa12.4□□□□□ -0.42
LIN54-207ENST00000508171 C8orf37Q96NL8 207 aa12.4□□□□□ -0.42
LIN54-207ENST00000508171 ZNF831Q5JPB2 1677 aa12.39□□□□□ -0.43
LIN54-207ENST00000508171 GNG11P61952 73 aa12.39□□□□□ -0.43
LIN54-207ENST00000508171 SLC35G1Q2M3R5 365 aa12.39□□□□□ -0.43
LIN54-207ENST00000508171 RC3H1Q5TC82 1133 aaKnown RBP12.39□□□□□ -0.43
LIN54-207ENST00000508171 C4orf32Q8N8J7 132 aa12.39□□□□□ -0.43
LIN54-207ENST00000508171 IRX2Q9BZI1 471 aaPredicted RBP12.39□□□□□ -0.43
LIN54-207ENST00000508171 CTNND2Q9UQB3 1225 aa12.39□□□□□ -0.43
LIN54-207ENST00000508171 EP400Q96L91 3159 aa12.39□□□□□ -0.43
LIN54-207ENST00000508171 A0A0U1RQJ8 604 aa12.39□□□□□ -0.43
LIN54-207ENST00000508171 AKR1B15C9JRZ8 316 aaPredicted RBP12.39□□□□□ -0.43
LIN54-207ENST00000508171 KIF5BP33176 963 aa12.39□□□□□ -0.43
LIN54-207ENST00000508171 RRAGBQ5VZM2 374 aa12.39□□□□□ -0.43
LIN54-207ENST00000508171 BLIDQ8IZY5 108 aa12.39□□□□□ -0.43
LIN54-207ENST00000508171 IGSF22Q8N9C0 903 aa12.39□□□□□ -0.43
LIN54-207ENST00000508171 ATRIPQ8WXE1 791 aa12.39□□□□□ -0.43
LIN54-207ENST00000508171 CARD6Q9BX69 1037 aa12.39□□□□□ -0.43
LIN54-207ENST00000508171 MAPK8IP1Q9UQF2 711 aa12.39□□□□□ -0.43
LIN54-207ENST00000508171 RTCBQ9Y3I0 505 aaKnown RBP12.39□□□□□ -0.43
LIN54-207ENST00000508171 LDHBP07195 334 aaKnown RBP12.38□□□□□ -0.43
LIN54-207ENST00000508171 PBX1P40424 430 aa12.38□□□□□ -0.43
LIN54-207ENST00000508171 TRAPPC10P48553 1259 aa12.38□□□□□ -0.43
LIN54-207ENST00000508171 DMTNQ08495 405 aa12.38□□□□□ -0.43
LIN54-207ENST00000508171 KARSQ15046 597 aaKnown RBP12.38□□□□□ -0.43
LIN54-207ENST00000508171 ARHGAP29Q52LW3 1261 aa12.38□□□□□ -0.43
LIN54-207ENST00000508171 TGFBRAP1Q8WUH2 860 aa12.38□□□□□ -0.43
LIN54-207ENST00000508171 NGLY1Q96IV0 654 aa12.38□□□□□ -0.43
LIN54-207ENST00000508171 MKNK2Q9HBH9 465 aa12.38□□□□□ -0.43
LIN54-207ENST00000508171 CCNL1Q9UK58 526 aaPredicted RBP12.38□□□□□ -0.43
LIN54-207ENST00000508171 CYTH3O43739 400 aa12.38□□□□□ -0.43
LIN54-207ENST00000508171 H2AFXP16104 143 aaPredicted RBP12.38□□□□□ -0.43
LIN54-207ENST00000508171 CCT6AP40227 531 aaKnown RBP12.38□□□□□ -0.43
LIN54-207ENST00000508171 CT47A1Q5JQC4 288 aaPredicted RBP12.38□□□□□ -0.43
LIN54-207ENST00000508171 SPTY2D1Q68D10 685 aaPredicted RBP12.38□□□□□ -0.43
LIN54-207ENST00000508171 RASGRP2Q7LDG7 609 aa12.38□□□□□ -0.43
LIN54-207ENST00000508171 DGKHQ86XP1 1220 aa12.38□□□□□ -0.43
LIN54-207ENST00000508171 CREBRFQ8IUR6 639 aa12.38□□□□□ -0.43
LIN54-207ENST00000508171 MRPL44Q9H9J2 332 aaKnown RBP12.38□□□□□ -0.43
LIN54-207ENST00000508171 MAD2L2Q9UI95 211 aa12.38□□□□□ -0.43
LIN54-207ENST00000508171 PP2D1A8MPX8 630 aa12.37□□□□□ -0.43
LIN54-207ENST00000508171 RAD9BQ6WBX8 426 aa12.37□□□□□ -0.43
LIN54-207ENST00000508171 EPC1Q9H2F5 836 aa12.37□□□□□ -0.43
LIN54-207ENST00000508171 CPVLQ9H3G5 476 aa12.37□□□□□ -0.43
LIN54-207ENST00000508171 SAP30BPQ9UHR5 308 aaKnown RBP12.37□□□□□ -0.43
LIN54-207ENST00000508171 PCDHA4Q9UN74 947 aa12.37□□□□□ -0.43
LIN54-207ENST00000508171 COL24A1Q17RW2 1714 aa12.37□□□□□ -0.43
LIN54-207ENST00000508171 RGL2O15211 777 aa12.37□□□□□ -0.43
LIN54-207ENST00000508171 GOLGA8HP0CJ92 632 aa12.37□□□□□ -0.43
LIN54-207ENST00000508171 CASQ1P31415 396 aa12.37□□□□□ -0.43
LIN54-207ENST00000508171 CASP14P31944 242 aa12.37□□□□□ -0.43
LIN54-207ENST00000508171 CLCN6P51797 869 aa12.37□□□□□ -0.43
LIN54-207ENST00000508171 PPFIBP1Q86W92 1011 aa12.37□□□□□ -0.43
LIN54-207ENST00000508171 TMEM60Q9H2L4 133 aa12.37□□□□□ -0.43
LIN54-207ENST00000508171 STX8Q9UNK0 236 aa12.37□□□□□ -0.43
LIN54-207ENST00000508171 TNRC6CQ9HCJ0 1690 aaKnown RBP12.37□□□□□ -0.43
LIN54-207ENST00000508171 BTAF1O14981 1849 aa12.37□□□□□ -0.43
LIN54-207ENST00000508171 SBF2Q86WG5 1849 aa12.36□□□□□ -0.43
LIN54-207ENST00000508171 TSPY3P0CV98 308 aa12.36□□□□□ -0.43
LIN54-207ENST00000508171 TSPY8P0CW00 308 aa12.36□□□□□ -0.43
LIN54-207ENST00000508171 CALML3P27482 149 aa12.36□□□□□ -0.43
LIN54-207ENST00000508171 FXR1P51114 621 aaKnown RBP eCLIP12.36□□□□□ -0.43
LIN54-207ENST00000508171 MAPKAPK5Q8IW41 473 aa12.36□□□□□ -0.43
LIN54-207ENST00000508171 MNS1Q8NEH6 495 aa12.36□□□□□ -0.43
LIN54-207ENST00000508171 UBXN4Q92575 508 aa12.36□□□□□ -0.43
LIN54-207ENST00000508171 PANX2Q96RD6 677 aa12.36□□□□□ -0.43
LIN54-207ENST00000508171 PLIN2Q99541 437 aa12.36□□□□□ -0.43
LIN54-207ENST00000508171 VPS16Q9H269 839 aa12.36□□□□□ -0.43
LIN54-207ENST00000508171 LZTFL1Q9NQ48 299 aa12.36□□□□□ -0.43
LIN54-207ENST00000508171 GDAQ9Y2T3 454 aa12.36□□□□□ -0.43
LIN54-207ENST00000508171 RNF225M0QZC1 329 aaPredicted RBP12.36□□□□□ -0.43
LIN54-207ENST00000508171 M0R2N6 131 aa12.36□□□□□ -0.43
LIN54-207ENST00000508171 GTPBP6O43824 516 aaPredicted RBP12.36□□□□□ -0.43
LIN54-207ENST00000508171 GYPCP04921 128 aa12.36□□□□□ -0.43
LIN54-207ENST00000508171 GRM4Q14833 912 aa12.36□□□□□ -0.43
LIN54-207ENST00000508171 KRT31Q15323 416 aa12.36□□□□□ -0.43
LIN54-207ENST00000508171 INF2Q27J81 1249 aa12.36□□□□□ -0.43
LIN54-207ENST00000508171 ARL6IP4Q66PJ3 421 aaKnown RBP12.36□□□□□ -0.43
LIN54-207ENST00000508171 WWC2Q6AWC2 1192 aa12.36□□□□□ -0.43
LIN54-207ENST00000508171 WDR66Q8TBY9 1149 aa12.36□□□□□ -0.43
LIN54-207ENST00000508171 KIFC2Q96AC6 838 aa12.36□□□□□ -0.43
LIN54-207ENST00000508171 CTAGE1Q96RT6 745 aa12.36□□□□□ -0.43
LIN54-207ENST00000508171 PCDHA6Q9UN73 950 aa12.36□□□□□ -0.43
LIN54-207ENST00000508171 PCDHA8Q9Y5H6 950 aa12.36□□□□□ -0.43
LIN54-207ENST00000508171 MAST2Q6P0Q8 1798 aa12.36□□□□□ -0.43
LIN54-207ENST00000508171 TADA3O75528 432 aa12.35□□□□□ -0.43
LIN54-207ENST00000508171 PRCPP42785 496 aa12.35□□□□□ -0.43
LIN54-207ENST00000508171 MAP3K9P80192 1104 aa12.35□□□□□ -0.43
LIN54-207ENST00000508171 HEATR3Q7Z4Q2 680 aa12.35□□□□□ -0.43
LIN54-207ENST00000508171 ZNF444Q8N0Y2 327 aaPredicted RBP12.35□□□□□ -0.43
LIN54-207ENST00000508171 ANKS1AQ92625 1134 aa12.35□□□□□ -0.43
LIN54-207ENST00000508171 TMEM47Q9BQJ4 181 aa12.35□□□□□ -0.43
LIN54-207ENST00000508171 CCDC194A0A1B0GVG4 234 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms