RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 RRP1BQ14684 758 aaKnown RBP12.74□□□□□ -0.37
PROM1-207ENST00000508167 IGDCC4Q8TDY8 1250 aa12.74□□□□□ -0.37
PROM1-207ENST00000508167 DDX11Q96FC9 970 aa12.74□□□□□ -0.37
PROM1-207ENST00000508167 LY9Q9HBG7 655 aa12.74□□□□□ -0.37
PROM1-207ENST00000508167 FGRP09769 529 aa12.74□□□□□ -0.37
PROM1-207ENST00000508167 LIFRP42702 1097 aa12.74□□□□□ -0.37
PROM1-207ENST00000508167 FAM173BQ6P4H8 233 aa12.74□□□□□ -0.37
PROM1-207ENST00000508167 APOA5Q6Q788 366 aa12.74□□□□□ -0.37
PROM1-207ENST00000508167 TRIM22Q8IYM9 498 aa12.74□□□□□ -0.37
PROM1-207ENST00000508167 ZNF280CQ8ND82 737 aa12.74□□□□□ -0.37
PROM1-207ENST00000508167 SYCE3A1L190 88 aa12.73□□□□□ -0.37
PROM1-207ENST00000508167 PDIA3P30101 505 aaKnown RBP12.73□□□□□ -0.37
PROM1-207ENST00000508167 HMGCS2P54868 508 aa12.73□□□□□ -0.37
PROM1-207ENST00000508167 HOMER1Q86YM7 354 aa12.73□□□□□ -0.37
PROM1-207ENST00000508167 FAM43AQ8N2R8 423 aa12.73□□□□□ -0.37
PROM1-207ENST00000508167 POLR2AP24928 1970 aaKnown RBP12.73□□□□□ -0.37
PROM1-207ENST00000508167 USP17L2Q6R6M4 530 aa12.73□□□□□ -0.37
PROM1-207ENST00000508167 ERO1BQ86YB8 467 aa12.73□□□□□ -0.37
PROM1-207ENST00000508167 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.73□□□□□ -0.37
PROM1-207ENST00000508167 WDR19Q8NEZ3 1342 aa12.73□□□□□ -0.37
PROM1-207ENST00000508167 F5H6K3 240 aa12.73□□□□□ -0.37
PROM1-207ENST00000508167 KLRC3Q07444 240 aa12.73□□□□□ -0.37
PROM1-207ENST00000508167 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.73□□□□□ -0.37
PROM1-207ENST00000508167 KCTD1Q719H9 257 aa12.73□□□□□ -0.37
PROM1-207ENST00000508167 CMTR1Q8N1G2 835 aaKnown RBP12.73□□□□□ -0.37
PROM1-207ENST00000508167 NYAP2Q9P242 653 aa12.73□□□□□ -0.37
PROM1-207ENST00000508167 PTPRAP18433 802 aa12.72□□□□□ -0.37
PROM1-207ENST00000508167 USP14P54578 494 aa12.72□□□□□ -0.37
PROM1-207ENST00000508167 CNKSR2Q8WXI2 1034 aa12.72□□□□□ -0.37
PROM1-207ENST00000508167 OPTNQ96CV9 577 aa12.72□□□□□ -0.37
PROM1-207ENST00000508167 NAV1Q8NEY1 1877 aa12.72□□□□□ -0.37
PROM1-207ENST00000508167 GOLGA6L22H0YM25 854 aa12.72□□□□□ -0.37
PROM1-207ENST00000508167 CDKL5O76039 1030 aa12.72□□□□□ -0.37
PROM1-207ENST00000508167 MBD3O95983 291 aa12.72□□□□□ -0.37
PROM1-207ENST00000508167 FANCBQ8NB91 859 aa12.72□□□□□ -0.37
PROM1-207ENST00000508167 RBM46Q8TBY0 533 aaKnown RBP12.72□□□□□ -0.37
PROM1-207ENST00000508167 NUP88Q99567 741 aaPredicted RBP12.72□□□□□ -0.37
PROM1-207ENST00000508167 KIF3AQ9Y496 699 aa12.72□□□□□ -0.37
PROM1-207ENST00000508167 SCN4AP35499 1836 aa12.72□□□□□ -0.37
PROM1-207ENST00000508167 PHF20L1A8MW92 1017 aa12.72□□□□□ -0.37
PROM1-207ENST00000508167 GNAQP50148 359 aa12.72□□□□□ -0.37
PROM1-207ENST00000508167 FKBP1BP68106 108 aa12.72□□□□□ -0.37
PROM1-207ENST00000508167 JAG1P78504 1218 aa12.72□□□□□ -0.37
PROM1-207ENST00000508167 FOXD4L6Q3SYB3 417 aaPredicted RBP12.72□□□□□ -0.37
PROM1-207ENST00000508167 FOXD4L3Q6VB84 417 aaPredicted RBP12.72□□□□□ -0.37
PROM1-207ENST00000508167 RBM43Q6ZSC3 357 aaKnown RBP12.72□□□□□ -0.37
PROM1-207ENST00000508167 GINM1Q9NU53 330 aa12.72□□□□□ -0.37
PROM1-207ENST00000508167 TCP11L1Q9NUJ3 509 aa12.72□□□□□ -0.37
PROM1-207ENST00000508167 PGBD1Q96JS3 809 aa12.72□□□□□ -0.37
PROM1-207ENST00000508167 MTA3Q9BTC8 594 aa12.72□□□□□ -0.37
PROM1-207ENST00000508167 UBA5Q9GZZ9 404 aa12.72□□□□□ -0.37
PROM1-207ENST00000508167 TMEM232C9JQI7 657 aa12.71□□□□□ -0.37
PROM1-207ENST00000508167 ITGBL1O95965 494 aaPredicted RBP12.71□□□□□ -0.37
PROM1-207ENST00000508167 ZNF274Q96GC6 653 aaPredicted RBP12.71□□□□□ -0.37
PROM1-207ENST00000508167 SLC26A6Q9BXS9 759 aa12.71□□□□□ -0.37
PROM1-207ENST00000508167 SEC63Q9UGP8 760 aaKnown RBP12.71□□□□□ -0.37
PROM1-207ENST00000508167 TMEM88BA6NKF7 163 aa12.71□□□□□ -0.37
PROM1-207ENST00000508167 UBE2HP62256 183 aa12.71□□□□□ -0.37
PROM1-207ENST00000508167 METTL16Q86W50 562 aaKnown RBP12.71□□□□□ -0.37
PROM1-207ENST00000508167 KIFC2Q96AC6 838 aa12.71□□□□□ -0.37
PROM1-207ENST00000508167 LLPHQ9BRT6 129 aaKnown RBP12.71□□□□□ -0.37
PROM1-207ENST00000508167 COL2A1P02458 1487 aaPredicted RBP12.71□□□□□ -0.38
PROM1-207ENST00000508167 MYH6P13533 1939 aa12.71□□□□□ -0.38
PROM1-207ENST00000508167 KLRF2D3W0D1 207 aa12.71□□□□□ -0.38
PROM1-207ENST00000508167 AP5Z1O43299 807 aa12.71□□□□□ -0.38
PROM1-207ENST00000508167 FLOT1O75955 427 aa12.71□□□□□ -0.38
PROM1-207ENST00000508167 DDAH1O94760 285 aa12.71□□□□□ -0.38
PROM1-207ENST00000508167 BMP3P12645 472 aa12.71□□□□□ -0.38
PROM1-207ENST00000508167 SLC16A2P36021 539 aa12.71□□□□□ -0.38
PROM1-207ENST00000508167 GNL2Q13823 731 aaKnown RBP12.71□□□□□ -0.38
PROM1-207ENST00000508167 SEC23AQ15436 765 aa12.71□□□□□ -0.38
PROM1-207ENST00000508167 CCAR1Q8IX12 1150 aaKnown RBP12.71□□□□□ -0.38
PROM1-207ENST00000508167 NDUFB10O96000 172 aa12.7□□□□□ -0.38
PROM1-207ENST00000508167 IRX3P78415 501 aaPredicted RBP12.7□□□□□ -0.38
PROM1-207ENST00000508167 FAM83BQ5T0W9 1011 aa12.7□□□□□ -0.38
PROM1-207ENST00000508167 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.7□□□□□ -0.38
PROM1-207ENST00000508167 FAM217BQ9NTX9 383 aaPredicted RBP12.7□□□□□ -0.38
PROM1-207ENST00000508167 IRF6O14896 467 aa12.7□□□□□ -0.38
PROM1-207ENST00000508167 TRIM29Q14134 588 aa12.7□□□□□ -0.38
PROM1-207ENST00000508167 SGMS1Q86VZ5 419 aa12.7□□□□□ -0.38
PROM1-207ENST00000508167 RBM28Q9NW13 759 aaKnown RBP12.7□□□□□ -0.38
PROM1-207ENST00000508167 WDR90Q96KV7 1748 aa12.7□□□□□ -0.38
PROM1-207ENST00000508167 hCG_1642624A0A1W2PR95 340 aa12.7□□□□□ -0.38
PROM1-207ENST00000508167 BACE1P56817 501 aa12.7□□□□□ -0.38
PROM1-207ENST00000508167 SSRP1Q08945 709 aaKnown RBP12.7□□□□□ -0.38
PROM1-207ENST00000508167 RCSD1Q6JBY9 416 aa12.7□□□□□ -0.38
PROM1-207ENST00000508167 CPVLQ9H3G5 476 aa12.7□□□□□ -0.38
PROM1-207ENST00000508167 VCPKMTQ9H867 229 aa12.7□□□□□ -0.38
PROM1-207ENST00000508167 SNCAIPQ9Y6H5 919 aa12.7□□□□□ -0.38
PROM1-207ENST00000508167 H3BQV1 296 aa12.69□□□□□ -0.38
PROM1-207ENST00000508167 IFFO2Q5TF58 517 aa12.69□□□□□ -0.38
PROM1-207ENST00000508167 ZNF112Q9UJU3 913 aa12.69□□□□□ -0.38
PROM1-207ENST00000508167 TMX2Q9Y320 296 aa12.69□□□□□ -0.38
PROM1-207ENST00000508167 A0A1W2PRG0 241 aa12.69□□□□□ -0.38
PROM1-207ENST00000508167 GUCY1A2P33402 732 aa12.69□□□□□ -0.38
PROM1-207ENST00000508167 FSTL1Q12841 308 aa12.69□□□□□ -0.38
PROM1-207ENST00000508167 SNAPC2Q13487 334 aa12.69□□□□□ -0.38
PROM1-207ENST00000508167 PLS1Q14651 629 aa12.69□□□□□ -0.38
PROM1-207ENST00000508167 PHKBQ93100 1093 aa12.69□□□□□ -0.38
PROM1-207ENST00000508167 ORC3Q9UBD5 711 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms